CircRNA Information

General Information
circRNA Basic Information
CircID chr10:100984819|100984984
Strand -
CircType exon
Host Gene ENSG00000095539.14;
Algorism CIRI2;
Sequence TCCCCTCCTCTCCCTTCCTGTGTGGCCCTTGTGAATCAGCCTCCCCACTCTCCTTGGTCATTCTCAAGAGTATGAGAGACAGAGCTCCAGGCATGTCCCATCCCCATGCACATGTGGTAACACACACCTGTATCACACATGTGCTTACATTTCCACTCACATGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:100984819|100984984 hsa-miR-526b-5p 0 0 1
chr10:100984819|100984984 hsa-miR-526b-3p 0 0 1
chr10:100984819|100984984 hsa-miR-552-5p 0 0 1
chr10:100984819|100984984 hsa-miR-552-3p 0 0 1
chr10:100984819|100984984 hsa-miR-580-5p 0 0 1
chr10:100984819|100984984 hsa-miR-580-3p 0 0 1
chr10:100984819|100984984 hsa-miR-593-5p 0 0 1
chr10:100984819|100984984 hsa-miR-593-3p 0 0 1
chr10:100984819|100984984 hsa-miR-661 0 0 1
chr10:100984819|100984984 hsa-miR-939-5p 0 0 1
chr10:100984819|100984984 hsa-miR-939-3p 0 0 1
chr10:100984819|100984984 hsa-miR-513b-5p 0 0 1
chr10:100984819|100984984 hsa-miR-513b-3p 0 0 1
chr10:100984819|100984984 hsa-miR-491-5p 0 0 1
chr10:100984819|100984984 hsa-miR-485-5p 0 0 1
chr10:100984819|100984984 hsa-miR-140-3p 0 0 1
chr10:100984819|100984984 hsa-miR-1302 0 1 1
chr10:100984819|100984984 hsa-miR-1300 0 0 1
chr10:100984819|100984984 hsa-miR-1254 0 0 1
chr10:100984819|100984984 hsa-miR-206 0 1 0
chr10:100984819|100984984 hsa-miR-608 1 0 0
chr10:100984819|100984984 hsa-miR-762 1 0 0
chr10:100984819|100984984 hsa-miR-3196 1 0 0
chr10:100984819|100984984 hsa-miR-4254 0 1 0
chr10:100984819|100984984 hsa-miR-4270 1 1 0
chr10:100984819|100984984 hsa-miR-3929 0 1 0
chr10:100984819|100984984 hsa-miR-1268b 1 0 0
chr10:100984819|100984984 hsa-miR-4463 1 0 0
chr10:100984819|100984984 hsa-miR-4514 1 0 0
chr10:100984819|100984984 hsa-miR-4525 1 0 0
chr10:100984819|100984984 hsa-miR-4651 1 0 0
chr10:100984819|100984984 hsa-miR-4656 1 0 0
chr10:100984819|100984984 hsa-miR-4673 1 0 0
chr10:100984819|100984984 hsa-miR-4706 1 0 0
chr10:100984819|100984984 hsa-miR-4739 0 1 0
chr10:100984819|100984984 hsa-miR-5192 1 1 0
chr10:100984819|100984984 hsa-miR-5787 1 0 0
chr10:100984819|100984984 hsa-miR-6086 1 0 0
chr10:100984819|100984984 hsa-miR-8085 1 0 0
chr10:100984819|100984984 hsa-miR-10226 0 1 0
chr10:100984819|100984984 hsa-miR-4433b-3p 1 0 0
chr10:100984819|100984984 hsa-miR-510-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6747-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6825-5p 1 1 0
chr10:100984819|100984984 hsa-miR-6894-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6857-5p 1 1 0
chr10:100984819|100984984 hsa-miR-6799-5p 1 0 0
chr10:100984819|100984984 hsa-miR-1236-5p 1 1 0
chr10:100984819|100984984 hsa-miR-7851-3p 1 0 0
chr10:100984819|100984984 hsa-miR-1227-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6757-5p 1 0 0
chr10:100984819|100984984 hsa-miR-3187-3p 1 0 0
chr10:100984819|100984984 hsa-miR-6716-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6871-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6768-5p 1 1 0
chr10:100984819|100984984 hsa-miR-6748-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6732-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6798-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6760-5p 0 1 0
chr10:100984819|100984984 hsa-miR-6782-5p 1 0 0
chr10:100984819|100984984 hsa-miR-3150b-3p 1 0 0
chr10:100984819|100984984 hsa-miR-6810-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6786-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4640-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6753-5p 1 0 0
chr10:100984819|100984984 hsa-miR-1908-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6771-5p 1 0 0
chr10:100984819|100984984 hsa-miR-92b-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6749-5p 1 0 0
chr10:100984819|100984984 hsa-miR-3202 0 1 0
chr10:100984819|100984984 hsa-miR-4787-5p 1 0 0
chr10:100984819|100984984 hsa-miR-149-3p 1 0 0
chr10:100984819|100984984 hsa-miR-6830-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6824-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6781-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6877-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6895-5p 1 1 0
chr10:100984819|100984984 hsa-miR-6895-3p 0 1 0
chr10:100984819|100984984 hsa-miR-7113-5p 1 0 0
chr10:100984819|100984984 hsa-miR-483-5p 1 0 0
chr10:100984819|100984984 hsa-miR-3664-5p 0 1 0
chr10:100984819|100984984 hsa-miR-6769b-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6816-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6775-5p 1 0 0
chr10:100984819|100984984 hsa-miR-1343-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6726-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6737-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6752-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6754-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6756-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6803-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6819-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6851-5p 1 0 0
chr10:100984819|100984984 hsa-miR-10401-5p 1 0 0
chr10:100984819|100984984 hsa-miR-1249-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6751-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6763-5p 1 0 0
chr10:100984819|100984984 hsa-miR-7111-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4728-5p 1 0 0
chr10:100984819|100984984 hsa-miR-5196-5p 0 1 0
chr10:100984819|100984984 hsa-miR-1237-5p 1 0 0
chr10:100984819|100984984 hsa-miR-328-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4632-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4726-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4745-5p 1 0 0
chr10:100984819|100984984 hsa-miR-675-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6846-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6848-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6887-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6831-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6845-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6885-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4758-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6731-5p 0 1 0
chr10:100984819|100984984 hsa-miR-6758-5p 1 0 0
chr10:100984819|100984984 hsa-miR-4700-5p 1 0 0
chr10:100984819|100984984 hsa-miR-6876-5p 0 1 0
chr10:100984819|100984984 hsa-miR-6837-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:100984819|100984984
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MCGPCESASPLSLVILKSMRDRAPGMSHPHAHVVTHTCITHVLTFPLTC
Nucleotide Sequence CTGTGTGGCCCTTGTGAATCAGCCTCCCCACTCTCCTTGGTCATTCTCAAGAGTATGAGAGACAGAGCTCCAGGCATGTCCCATCCCCATGCACATGTGGTAACACACACCTGTATCACACATGTGCTTACATTTCCACTCACATGC
CircID chr10:100984819|100984984
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPGALSLILLRMTKESGEADSQGPHRKGEEG
Nucleotide Sequence ATGCCTGGAGCTCTGTCTCTCATACTCTTGAGAATGACCAAGGAGAGTGGGGAGGCTGATTCACAAGGGCCACACAGGAAGGGAGAGGAGGGG
CircID chr10:100984819|100984984
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MCDTGVCYHMCMGMGHAWSSVSHTLENDQGEWGG
Nucleotide Sequence ATGTGTGATACAGGTGTGTGTTACCACATGTGCATGGGGATGGGACATGCCTGGAGCTCTGTCTCTCATACTCTTGAGAATGACCAAGGAGAGTGGGGAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab