CircRNA Information

General Information
circRNA Basic Information
CircID chr10:100991272|100991587
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TTCTGCATTACTCTCTTTCCCAGCTCCATGTTTGTTCCATCATGGCACATGATTTGTGCTCCTTGCTCTGAATTCCCTAGGCCCAGCCCAGGCCTCGTATGTAATAGGCATTCAGTGTAACACTAGAAGCTCCAGGATTGGGCTGGTCCTGATGCCCAGAAGGCCCTCACATTTATCTGATTGTCTAATACCCATTGTCTACCAAACCTCAACCCAACCTTTGTTGTCACCTCCTCTGGAAGTCTCCCAGATGTCCCGGGCTGACTCAGACATCTTTTCTCTTTGCTCTCCAAATACTTGTGCTGCCTATCATACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:100991272|100991587 hsa-miR-185-5p 0 0 1
chr10:100991272|100991587 hsa-miR-185-3p 0 0 1
chr10:100991272|100991587 hsa-miR-379-5p 0 0 1
chr10:100991272|100991587 hsa-miR-379-3p 0 0 1
chr10:100991272|100991587 hsa-miR-495-5p 0 0 1
chr10:100991272|100991587 hsa-miR-495-3p 0 0 1
chr10:100991272|100991587 hsa-miR-577 0 0 1
chr10:100991272|100991587 hsa-miR-612 1 0 1
chr10:100991272|100991587 hsa-miR-617 0 0 1
chr10:100991272|100991587 hsa-miR-620 0 0 1
chr10:100991272|100991587 hsa-miR-661 0 0 1
chr10:100991272|100991587 hsa-miR-298 0 0 1
chr10:100991272|100991587 hsa-miR-940 0 0 1
chr10:100991272|100991587 hsa-miR-1227-5p 0 0 1
chr10:100991272|100991587 hsa-miR-1227-3p 0 0 1
chr10:100991272|100991587 hsa-miR-1237-5p 0 0 1
chr10:100991272|100991587 hsa-miR-1237-3p 0 0 1
chr10:100991272|100991587 hsa-miR-1294 0 0 1
chr10:100991272|100991587 hsa-miR-1270 0 0 1
chr10:100991272|100991587 hsa-miR-525-5p 0 0 1
chr10:100991272|100991587 hsa-miR-654-3p 0 0 1
chr10:100991272|100991587 hsa-miR-455-5p 0 0 1
chr10:100991272|100991587 hsa-miR-520a-5p 0 0 1
chr10:100991272|100991587 hsa-miR-1285 0 0 1
chr10:100991272|100991587 hsa-miR-768-5p 0 0 1
chr10:100991272|100991587 hsa-miR-549 0 0 1
chr10:100991272|100991587 hsa-miR-107 1 0 0
chr10:100991272|100991587 hsa-miR-198 1 0 0
chr10:100991272|100991587 hsa-miR-637 1 0 0
chr10:100991272|100991587 hsa-miR-650 1 0 0
chr10:100991272|100991587 hsa-miR-762 1 0 0
chr10:100991272|100991587 hsa-miR-920 1 0 0
chr10:100991272|100991587 hsa-miR-1295a 1 0 0
chr10:100991272|100991587 hsa-miR-1469 1 0 0
chr10:100991272|100991587 hsa-miR-2278 1 0 0
chr10:100991272|100991587 hsa-miR-2861 1 0 0
chr10:100991272|100991587 hsa-miR-3138 1 0 0
chr10:100991272|100991587 hsa-miR-3147 1 0 0
chr10:100991272|100991587 hsa-miR-3170 1 0 0
chr10:100991272|100991587 hsa-miR-4298 1 0 0
chr10:100991272|100991587 hsa-miR-4259 1 0 0
chr10:100991272|100991587 hsa-miR-3937 1 0 0
chr10:100991272|100991587 hsa-miR-4498 1 0 0
chr10:100991272|100991587 hsa-miR-4505 1 0 0
chr10:100991272|100991587 hsa-miR-4506 1 0 0
chr10:100991272|100991587 hsa-miR-2392 1 0 0
chr10:100991272|100991587 hsa-miR-4507 1 0 0
chr10:100991272|100991587 hsa-miR-1587 1 0 0
chr10:100991272|100991587 hsa-miR-4644 1 0 0
chr10:100991272|100991587 hsa-miR-4651 1 0 0
chr10:100991272|100991587 hsa-miR-4656 1 0 0
chr10:100991272|100991587 hsa-miR-4688 1 0 0
chr10:100991272|100991587 hsa-miR-5192 1 0 0
chr10:100991272|100991587 hsa-miR-5572 1 0 0
chr10:100991272|100991587 hsa-miR-5787 1 0 0
chr10:100991272|100991587 hsa-miR-6085 1 0 0
chr10:100991272|100991587 hsa-miR-6086 1 0 0
chr10:100991272|100991587 hsa-miR-6860 1 0 0
chr10:100991272|100991587 hsa-miR-8060 1 0 0
chr10:100991272|100991587 hsa-miR-8082 1 0 0
chr10:100991272|100991587 hsa-miR-8089 1 0 0
chr10:100991272|100991587 hsa-miR-10226 1 0 0
chr10:100991272|100991587 hsa-miR-12115 1 0 0
chr10:100991272|100991587 hsa-miR-92a-1-5p 1 0 0
chr10:100991272|100991587 hsa-miR-504-3p 1 0 0
chr10:100991272|100991587 hsa-miR-1247-3p 1 0 0
chr10:100991272|100991587 hsa-miR-6747-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6825-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6799-5p 1 0 0
chr10:100991272|100991587 hsa-miR-8071 1 0 0
chr10:100991272|100991587 hsa-miR-7851-3p 1 0 0
chr10:100991272|100991587 hsa-miR-5187-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6515-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6089 1 0 0
chr10:100991272|100991587 hsa-miR-4695-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6806-5p 1 0 0
chr10:100991272|100991587 hsa-miR-197-5p 1 0 0
chr10:100991272|100991587 hsa-miR-8069 1 0 0
chr10:100991272|100991587 hsa-miR-6716-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6732-5p 1 0 0
chr10:100991272|100991587 hsa-miR-486-3p 1 0 0
chr10:100991272|100991587 hsa-miR-6782-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3150b-3p 1 0 0
chr10:100991272|100991587 hsa-miR-3934-3p 1 0 0
chr10:100991272|100991587 hsa-miR-1226-5p 1 0 0
chr10:100991272|100991587 hsa-miR-1229-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6784-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4640-5p 1 0 0
chr10:100991272|100991587 hsa-miR-885-3p 1 0 0
chr10:100991272|100991587 hsa-miR-296-3p 1 0 0
chr10:100991272|100991587 hsa-miR-6823-5p 1 0 0
chr10:100991272|100991587 hsa-miR-877-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4732-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6749-5p 1 0 0
chr10:100991272|100991587 hsa-miR-7854-3p 1 0 0
chr10:100991272|100991587 hsa-miR-4787-5p 1 0 0
chr10:100991272|100991587 hsa-miR-2681-3p 1 0 0
chr10:100991272|100991587 hsa-miR-103a-3p 1 0 0
chr10:100991272|100991587 hsa-miR-6824-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3162-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6800-5p 1 0 0
chr10:100991272|100991587 hsa-miR-664b-5p 1 0 0
chr10:100991272|100991587 hsa-miR-423-5p 1 0 0
chr10:100991272|100991587 hsa-miR-383-3p 1 0 0
chr10:100991272|100991587 hsa-miR-509-3p 1 0 0
chr10:100991272|100991587 hsa-miR-3144-5p 1 0 0
chr10:100991272|100991587 hsa-miR-15a-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6812-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6865-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6870-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6893-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6775-5p 1 0 0
chr10:100991272|100991587 hsa-miR-1343-5p 1 0 0
chr10:100991272|100991587 hsa-miR-5001-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6726-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6752-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6756-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6803-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6813-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6815-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6819-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6851-5p 1 0 0
chr10:100991272|100991587 hsa-miR-7107-5p 1 0 0
chr10:100991272|100991587 hsa-miR-7110-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6751-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6763-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6788-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6797-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3620-5p 1 0 0
chr10:100991272|100991587 hsa-miR-449c-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4632-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4726-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6794-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6846-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6848-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6858-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6887-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3187-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4723-5p 1 0 0
chr10:100991272|100991587 hsa-miR-939-5p 1 0 0
chr10:100991272|100991587 hsa-miR-365b-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6511a-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3085-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3940-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6731-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6855-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4646-5p 1 0 0
chr10:100991272|100991587 hsa-miR-541-3p 1 0 0
chr10:100991272|100991587 hsa-miR-6750-5p 1 0 0
chr10:100991272|100991587 hsa-miR-6785-5p 1 0 0
chr10:100991272|100991587 hsa-miR-4667-5p 1 0 0
chr10:100991272|100991587 hsa-miR-3529-5p 1 0 0
chr10:100991272|100991587 hsa-miR-497-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:100991272|100991587
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MFVPSWHMICAPCSEFPRPSPGLVCNRHSV
Nucleotide Sequence ATGTTTGTTCCATCATGGCACATGATTTGTGCTCCTTGCTCTGAATTCCCTAGGCCCAGCCCAGGCCTCGTATGTAATAGGCATTCAGTGTAA
CircID chr10:100991272|100991587
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MSNTHCLPNLNPTFVVTSSGSLPDVPG
Nucleotide Sequence TTGTCTAATACCCATTGTCTACCAAACCTCAACCCAACCTTTGTTGTCACCTCCTCTGGAAGTCTCCCAGATGTCCCGGGCTGA
CircID chr10:100991272|100991587
ORF Type ORF3
Protein Length 83
Nucleotide Length 249
Protein Sequence MNSLGPAQASYVIGIQCNTRSSRIGLVLMPRRPSHLSDCLIPIVYQTSTQPLLSPPLEVSQMSRADSDIFSLCSPNTCAAYHT
Nucleotide Sequence CTGAATTCCCTAGGCCCAGCCCAGGCCTCGTATGTAATAGGCATTCAGTGTAACACTAGAAGCTCCAGGATTGGGCTGGTCCTGATGCCCAGAAGGCCCTCACATTTATCTGATTGTCTAATACCCATTGTCTACCAAACCTCAACCCAACCTTTGTTGTCACCTCCTCTGGAAGTCTCCCAGATGTCCCGGGCTGACTCAGACATCTTTTCTCTTTGCTCTCCAAATACTTGTGCTGCCTATCATACT
CircID chr10:100991272|100991587
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MSTKPQPNLCCHLLWKSPRCPGLTQTSFLFALQILVLPII
Nucleotide Sequence TTGTCTACCAAACCTCAACCCAACCTTTGTTGTCACCTCCTCTGGAAGTCTCCCAGATGTCCCGGGCTGACTCAGACATCTTTTCTCTTTGCTCTCCAAATACTTGTGCTGCCTATCATA
CircID chr10:100991272|100991587
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MGIRQSDKCEGLLGIRTSPILELLVLH
Nucleotide Sequence ATGGGTATTAGACAATCAGATAAATGTGAGGGCCTTCTGGGCATCAGGACCAGCCCAATCCTGGAGCTTCTAGTGTTACACTGA
CircID chr10:100991272|100991587
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MESKEKRCLSQPGTSGRLPEEVTTKVGLRFGRQWVLDNQINVRAFWASGPAQSWSF
Nucleotide Sequence TTGGAGAGCAAAGAGAAAAGATGTCTGAGTCAGCCCGGGACATCTGGGAGACTTCCAGAGGAGGTGACAACAAAGGTTGGGTTGAGGTTTGGTAGACAATGGGTATTAGACAATCAGATAAATGTGAGGGCCTTCTGGGCATCAGGACCAGCCCAATCCTGGAGCTTCTAG
CircID chr10:100991272|100991587
ORF Type ORF7
Protein Length 28
Nucleotide Length 84
Protein Sequence MGLGNSEQGAQIMCHDGTNMELGKRVMQ
Nucleotide Sequence CTGGGCCTAGGGAATTCAGAGCAAGGAGCACAAATCATGTGCCATGATGGAACAAACATGGAGCTGGGAAAGAGAGTAATGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab