CircRNA Information

General Information
circRNA Basic Information
CircID chr10:101038119|101038215
Strand +
CircType exon
Host Gene ENSG00000107819.12;
Algorism CIRI2;
Sequence CTGTTCCTCAAATGTGCAAGCCCCTCCTACTGCAGTGCCCTTGCACTGACTGTTTTCTGTACCCCAAACACTCTTCTCTGCGTTATTTGGCTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:101038119|101038215 hsa-miR-148a-5p 0 0 1
chr10:101038119|101038215 hsa-miR-148a-3p 0 0 1
chr10:101038119|101038215 hsa-miR-212-5p 0 0 1
chr10:101038119|101038215 hsa-miR-212-3p 0 0 1
chr10:101038119|101038215 hsa-miR-130a-5p 0 0 1
chr10:101038119|101038215 hsa-miR-130a-3p 0 0 1
chr10:101038119|101038215 hsa-miR-132-5p 0 0 1
chr10:101038119|101038215 hsa-miR-132-3p 0 0 1
chr10:101038119|101038215 hsa-miR-152-5p 0 0 1
chr10:101038119|101038215 hsa-miR-152-3p 0 0 1
chr10:101038119|101038215 hsa-miR-301a-5p 0 0 1
chr10:101038119|101038215 hsa-miR-301a-3p 0 0 1
chr10:101038119|101038215 hsa-miR-130b-5p 0 0 1
chr10:101038119|101038215 hsa-miR-130b-3p 0 0 1
chr10:101038119|101038215 hsa-miR-148b-5p 0 0 1
chr10:101038119|101038215 hsa-miR-148b-3p 0 0 1
chr10:101038119|101038215 hsa-miR-570-5p 0 0 1
chr10:101038119|101038215 hsa-miR-570-3p 0 0 1
chr10:101038119|101038215 hsa-miR-454-5p 0 0 1
chr10:101038119|101038215 hsa-miR-454-3p 0 0 1
chr10:101038119|101038215 hsa-miR-301b-5p 0 0 1
chr10:101038119|101038215 hsa-miR-301b-3p 0 0 1
chr10:101038119|101038215 hsa-miR-1304-5p 0 0 1
chr10:101038119|101038215 hsa-miR-1304-3p 0 0 1
chr10:101038119|101038215 hsa-miR-1253 0 0 1
chr10:101038119|101038215 hsa-miR-1224-5p 0 0 1
chr10:101038119|101038215 hsa-miR-423-5p 0 0 1
chr10:101038119|101038215 hsa-miR-509-3-5p 0 0 1
chr10:101038119|101038215 hsa-miR-509-5p 0 0 1
chr10:101038119|101038215 hsa-miR-663a 1 0 0
chr10:101038119|101038215 hsa-miR-3154 1 0 0
chr10:101038119|101038215 hsa-miR-3659 1 0 0
chr10:101038119|101038215 hsa-miR-4516 1 0 0
chr10:101038119|101038215 hsa-miR-4688 1 0 0
chr10:101038119|101038215 hsa-miR-4689 1 0 0
chr10:101038119|101038215 hsa-miR-4784 1 0 0
chr10:101038119|101038215 hsa-miR-5194 1 0 0
chr10:101038119|101038215 hsa-miR-5572 1 0 0
chr10:101038119|101038215 hsa-miR-6085 1 0 0
chr10:101038119|101038215 hsa-miR-4433b-3p 1 0 0
chr10:101038119|101038215 hsa-miR-4433a-3p 1 0 0
chr10:101038119|101038215 hsa-miR-7106-5p 1 0 0
chr10:101038119|101038215 hsa-miR-3926 1 0 0
chr10:101038119|101038215 hsa-miR-4695-5p 1 0 0
chr10:101038119|101038215 hsa-miR-4722-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6730-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6890-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6721-5p 1 0 0
chr10:101038119|101038215 hsa-miR-197-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6798-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6881-5p 1 0 0
chr10:101038119|101038215 hsa-miR-2467-3p 1 0 0
chr10:101038119|101038215 hsa-miR-4732-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6847-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6895-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6832-5p 1 0 0
chr10:101038119|101038215 hsa-miR-1207-5p 1 0 0
chr10:101038119|101038215 hsa-miR-1233-5p 1 0 0
chr10:101038119|101038215 hsa-miR-4763-3p 1 0 0
chr10:101038119|101038215 hsa-miR-6778-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6812-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6743-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6756-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6813-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6819-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6779-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6797-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6808-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6879-5p 1 0 0
chr10:101038119|101038215 hsa-miR-4728-5p 1 0 0
chr10:101038119|101038215 hsa-miR-10396b-5p 1 0 0
chr10:101038119|101038215 hsa-miR-328-5p 1 0 0
chr10:101038119|101038215 hsa-miR-4632-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6735-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6738-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6846-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6885-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6856-5p 1 0 0
chr10:101038119|101038215 hsa-miR-1914-3p 1 0 0
chr10:101038119|101038215 hsa-miR-6855-5p 1 0 0
chr10:101038119|101038215 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:101038119|101038215
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence LFLKCASPSYCSALALTVFCTPNTLLCVIWLS
Nucleotide Sequence CTGTTCCTCAAATGTGCAAGCCCCTCCTACTGCAGTGCCCTTGCACTGACTGTTTTCTGTACCCCAAACACTCTTCTCTGCGTTATTTGGCTCTCT
CircID chr10:101038119|101038215
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MCKPLLLQCPCTDCFLYPKHSSLRYLAL
Nucleotide Sequence ATGTGCAAGCCCCTCCTACTGCAGTGCCCTTGCACTGACTGTTTTCTGTACCCCAAACACTCTTCTCTGCGTTATTTGGCTCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab