CircRNA Information

General Information
circRNA Basic Information
CircID chr10:101611321|101611702
Strand +
CircType exon
Host Gene ENSG00000107829.12;
Algorism CIRI2;
Sequence CACCTGCTGGCCACAGGTTCCTCCTACTACGGTGTTGTACGGCTGTGGGACCGGCGTCAAAGGGCCTGCCTGCACGTAAGTGTCCTGCCCACCTCTTCTCCAGCATGCCAGGACTCATGATTATGGGCTGCATTTGGGAGAGGGTGAGGTAGCCAAGGACGTGCCTAGAAAGGGTTGGAAGAAGCCTACAATGGCACACGTCCCTCTTCCCCTGGGCCTGGGGATCCTGGGTTAGGGCACACCCATGTCCCACTTGGAAAGCTCTTACCACTTCCTGTGCCCTCCCTTCCAGGCCTTCCCGCTGACGTCGACTCCCCTCAGCAGCCCTGTGTACTGCCTGCGTCTCACCACCAAGCATCTCTATGCTGCCCTGTCTTACAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:101611321|101611702 hsa-miR-107 1 0 1
chr10:101611321|101611702 hsa-miR-214-5p 0 0 1
chr10:101611321|101611702 hsa-miR-214-3p 0 0 1
chr10:101611321|101611702 hsa-miR-150-5p 0 0 1
chr10:101611321|101611702 hsa-miR-150-3p 0 0 1
chr10:101611321|101611702 hsa-miR-609 0 0 1
chr10:101611321|101611702 hsa-miR-641 0 0 1
chr10:101611321|101611702 hsa-miR-645 0 0 1
chr10:101611321|101611702 hsa-miR-649 0 0 1
chr10:101611321|101611702 hsa-miR-541-5p 0 0 1
chr10:101611321|101611702 hsa-miR-541-3p 0 0 1
chr10:101611321|101611702 hsa-miR-940 0 0 1
chr10:101611321|101611702 hsa-miR-1227-5p 0 0 1
chr10:101611321|101611702 hsa-miR-1227-3p 0 0 1
chr10:101611321|101611702 hsa-miR-663b 0 0 1
chr10:101611321|101611702 hsa-miR-1286 0 0 1
chr10:101611321|101611702 hsa-miR-1287-5p 0 0 1
chr10:101611321|101611702 hsa-miR-1287-3p 0 0 1
chr10:101611321|101611702 hsa-miR-1253 0 0 1
chr10:101611321|101611702 hsa-miR-1321 0 0 1
chr10:101611321|101611702 hsa-miR-1197 0 0 1
chr10:101611321|101611702 hsa-miR-139-3p 1 0 1
chr10:101611321|101611702 hsa-miR-532-3p 0 0 1
chr10:101611321|101611702 hsa-miR-423-5p 0 0 1
chr10:101611321|101611702 hsa-miR-654-5p 1 0 1
chr10:101611321|101611702 hsa-miR-188-3p 0 0 1
chr10:101611321|101611702 hsa-miR-876-3p 0 0 1
chr10:101611321|101611702 hsa-miR-1302 0 0 1
chr10:101611321|101611702 hsa-miR-105 0 0 1
chr10:101611321|101611702 hsa-miR-323-5p 0 0 1
chr10:101611321|101611702 hsa-miR-103 0 0 1
chr10:101611321|101611702 hsa-miR-220c 0 0 1
chr10:101611321|101611702 hsa-miR-1308 0 0 1
chr10:101611321|101611702 hsa-miR-1254 0 0 1
chr10:101611321|101611702 hsa-miR-923 0 0 1
chr10:101611321|101611702 hsa-miR-612 0 1 0
chr10:101611321|101611702 hsa-miR-762 1 0 0
chr10:101611321|101611702 hsa-miR-3138 1 0 0
chr10:101611321|101611702 hsa-miR-3141 1 0 0
chr10:101611321|101611702 hsa-miR-3175 1 0 0
chr10:101611321|101611702 hsa-miR-3181 1 0 0
chr10:101611321|101611702 hsa-miR-3197 1 0 0
chr10:101611321|101611702 hsa-miR-4270 1 0 0
chr10:101611321|101611702 hsa-miR-4281 1 0 0
chr10:101611321|101611702 hsa-miR-3918 1 0 0
chr10:101611321|101611702 hsa-miR-3945 1 1 0
chr10:101611321|101611702 hsa-miR-1268b 1 0 0
chr10:101611321|101611702 hsa-miR-3135b 0 1 0
chr10:101611321|101611702 hsa-miR-4514 0 1 0
chr10:101611321|101611702 hsa-miR-4516 0 1 0
chr10:101611321|101611702 hsa-miR-4519 1 0 0
chr10:101611321|101611702 hsa-miR-4651 1 0 0
chr10:101611321|101611702 hsa-miR-4656 1 0 0
chr10:101611321|101611702 hsa-miR-4675 1 0 0
chr10:101611321|101611702 hsa-miR-4688 1 0 0
chr10:101611321|101611702 hsa-miR-4706 1 0 0
chr10:101611321|101611702 hsa-miR-4710 1 0 0
chr10:101611321|101611702 hsa-miR-4739 1 1 0
chr10:101611321|101611702 hsa-miR-4741 1 1 0
chr10:101611321|101611702 hsa-miR-5090 1 0 0
chr10:101611321|101611702 hsa-miR-5194 1 0 0
chr10:101611321|101611702 hsa-miR-5685 0 1 0
chr10:101611321|101611702 hsa-miR-5698 1 0 0
chr10:101611321|101611702 hsa-miR-5787 1 0 0
chr10:101611321|101611702 hsa-miR-6085 1 0 0
chr10:101611321|101611702 hsa-miR-6088 1 0 0
chr10:101611321|101611702 hsa-miR-6090 1 0 0
chr10:101611321|101611702 hsa-miR-6127 1 0 0
chr10:101611321|101611702 hsa-miR-6132 1 0 0
chr10:101611321|101611702 hsa-miR-6133 1 0 0
chr10:101611321|101611702 hsa-miR-6134 0 1 0
chr10:101611321|101611702 hsa-miR-6860 1 0 0
chr10:101611321|101611702 hsa-miR-8073 0 1 0
chr10:101611321|101611702 hsa-miR-8075 1 0 0
chr10:101611321|101611702 hsa-miR-9899 1 0 0
chr10:101611321|101611702 hsa-miR-12116 0 1 0
chr10:101611321|101611702 hsa-miR-12119 1 0 0
chr10:101611321|101611702 hsa-miR-4433b-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6734-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6840-3p 0 1 0
chr10:101611321|101611702 hsa-miR-323a-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6765-5p 1 0 0
chr10:101611321|101611702 hsa-miR-671-5p 1 1 0
chr10:101611321|101611702 hsa-miR-212-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6861-5p 1 0 0
chr10:101611321|101611702 hsa-miR-7106-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6825-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6894-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4687-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6720-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6892-3p 0 1 0
chr10:101611321|101611702 hsa-miR-6799-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3692-5p 0 1 0
chr10:101611321|101611702 hsa-miR-766-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6089 1 0 0
chr10:101611321|101611702 hsa-miR-4695-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4722-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6875-3p 0 1 0
chr10:101611321|101611702 hsa-miR-3928-3p 0 1 0
chr10:101611321|101611702 hsa-miR-6727-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6806-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6721-5p 1 1 0
chr10:101611321|101611702 hsa-miR-197-5p 1 0 0
chr10:101611321|101611702 hsa-miR-8069 1 0 0
chr10:101611321|101611702 hsa-miR-874-3p 0 1 0
chr10:101611321|101611702 hsa-miR-7108-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6871-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6768-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6829-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6798-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3126-5p 0 1 0
chr10:101611321|101611702 hsa-miR-486-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6888-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6821-5p 1 0 0
chr10:101611321|101611702 hsa-miR-7855-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6882-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6815-3p 0 1 0
chr10:101611321|101611702 hsa-miR-5088-5p 1 0 0
chr10:101611321|101611702 hsa-miR-7109-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1226-5p 1 0 0
chr10:101611321|101611702 hsa-miR-885-3p 1 0 0
chr10:101611321|101611702 hsa-miR-4764-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3127-5p 1 0 0
chr10:101611321|101611702 hsa-miR-7161-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6771-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6823-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3202 1 1 0
chr10:101611321|101611702 hsa-miR-103a-3p 1 0 0
chr10:101611321|101611702 hsa-miR-149-3p 1 1 0
chr10:101611321|101611702 hsa-miR-6824-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3162-5p 1 0 0
chr10:101611321|101611702 hsa-miR-103b 0 1 0
chr10:101611321|101611702 hsa-miR-4661-3p 0 1 0
chr10:101611321|101611702 hsa-miR-629-3p 0 1 0
chr10:101611321|101611702 hsa-miR-4727-3p 1 0 0
chr10:101611321|101611702 hsa-miR-5000-3p 0 1 0
chr10:101611321|101611702 hsa-miR-2355-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6865-3p 0 1 0
chr10:101611321|101611702 hsa-miR-4746-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6851-3p 0 1 0
chr10:101611321|101611702 hsa-miR-3157-3p 0 1 0
chr10:101611321|101611702 hsa-miR-642a-5p 0 1 0
chr10:101611321|101611702 hsa-miR-4777-3p 0 1 0
chr10:101611321|101611702 hsa-miR-3678-5p 0 1 0
chr10:101611321|101611702 hsa-miR-1207-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1233-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4763-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6778-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6812-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6893-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6775-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1343-5p 1 0 0
chr10:101611321|101611702 hsa-miR-5001-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6726-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6743-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6752-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6754-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6803-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6851-5p 1 0 0
chr10:101611321|101611702 hsa-miR-7107-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1249-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6722-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6763-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6779-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6780a-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6797-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6808-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6879-5p 1 1 0
chr10:101611321|101611702 hsa-miR-7111-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1915-3p 1 1 0
chr10:101611321|101611702 hsa-miR-4728-5p 1 1 0
chr10:101611321|101611702 hsa-miR-5196-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6780b-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6836-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6862-5p 0 1 0
chr10:101611321|101611702 hsa-miR-328-5p 1 0 0
chr10:101611321|101611702 hsa-miR-449c-5p 1 1 0
chr10:101611321|101611702 hsa-miR-4632-5p 1 1 0
chr10:101611321|101611702 hsa-miR-4685-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4725-3p 0 1 0
chr10:101611321|101611702 hsa-miR-4745-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4749-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6735-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6738-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6777-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6795-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6846-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6848-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6883-5p 1 1 0
chr10:101611321|101611702 hsa-miR-6887-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6889-5p 1 0 0
chr10:101611321|101611702 hsa-miR-3187-5p 1 0 0
chr10:101611321|101611702 hsa-miR-4436b-3p 1 1 0
chr10:101611321|101611702 hsa-miR-939-5p 1 0 0
chr10:101611321|101611702 hsa-miR-1266-5p 1 0 0
chr10:101611321|101611702 hsa-miR-34b-5p 0 1 0
chr10:101611321|101611702 hsa-miR-6511a-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6511b-5p 1 1 0
chr10:101611321|101611702 hsa-miR-1914-3p 1 0 0
chr10:101611321|101611702 hsa-miR-6785-5p 1 1 0
chr10:101611321|101611702 hsa-miR-3184-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6859-5p 1 0 0
chr10:101611321|101611702 hsa-miR-6500-5p 1 0 0
chr10:101611321|101611702 hsa-miR-103a-1-5p 0 1 0
chr10:101611321|101611702 hsa-miR-4799-3p 0 1 0
chr10:101611321|101611702 hsa-miR-7853-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:101611321|101611702
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MLATGSSYYGVVRLWDRRQRACLHVSVLPTSSPACQDS
Nucleotide Sequence CTGCTGGCCACAGGTTCCTCCTACTACGGTGTTGTACGGCTGTGGGACCGGCGTCAAAGGGCCTGCCTGCACGTAAGTGTCCTGCCCACCTCTTCTCCAGCATGCCAGGACTCATGA
CircID chr10:101611321|101611702
ORF Type ORF2
Protein Length 69
Nucleotide Length 207
Protein Sequence MEEAYNGTRPSSPGPGDPGLGHTHVPLGKLLPLPVPSLPGLPADVDSPQQPCVLPASHHQASLCCPVLQ
Nucleotide Sequence TTGGAAGAAGCCTACAATGGCACACGTCCCTCTTCCCCTGGGCCTGGGGATCCTGGGTTAGGGCACACCCATGTCCCACTTGGAAAGCTCTTACCACTTCCTGTGCCCTCCCTTCCAGGCCTTCCCGCTGACGTCGACTCCCCTCAGCAGCCCTGTGTACTGCCTGCGTCTCACCACCAAGCATCTCTATGCTGCCCTGTCTTACAA
CircID chr10:101611321|101611702
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MHLGEGEVAKDVPRKGWKKPTMAHVPLPLGLGILG
Nucleotide Sequence CTGCATTTGGGAGAGGGTGAGGTAGCCAAGGACGTGCCTAGAAAGGGTTGGAAGAAGCCTACAATGGCACACGTCCCTCTTCCCCTGGGCCTGGGGATCCTGGGTTAG
CircID chr10:101611321|101611702
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MSHLESSYHFLCPPFQAFPLTSTPLSSPVYCLRLTTKHLYAALSYN
Nucleotide Sequence ATGTCCCACTTGGAAAGCTCTTACCACTTCCTGTGCCCTCCCTTCCAGGCCTTCCCGCTGACGTCGACTCCCCTCAGCAGCCCTGTGTACTGCCTGCGTCTCACCACCAAGCATCTCTATGCTGCCCTGTCTTACAAC
CircID chr10:101611321|101611702
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MPARKCPAHLFSSMPGLMIMGCIWERVR
Nucleotide Sequence CTGCCTGCACGTAAGTGTCCTGCCCACCTCTTCTCCAGCATGCCAGGACTCATGATTATGGGCTGCATTTGGGAGAGGGTGAGGTAG
CircID chr10:101611321|101611702
ORF Type ORF6
Protein Length 119
Nucleotide Length 357
Protein Sequence MLGGETQAVHRAAEGSRRQREGLEGRAQEVVRAFQVGHGCALTQDPQAQGKRDVCHCRLLPTLSRHVLGYLTLSQMQPIIMSPGMLEKRWAGHLRAGRPFDAGPTAVQHRSRRNLWPAG
Nucleotide Sequence ATGCTTGGTGGTGAGACGCAGGCAGTACACAGGGCTGCTGAGGGGAGTCGACGTCAGCGGGAAGGCCTGGAAGGGAGGGCACAGGAAGTGGTAAGAGCTTTCCAAGTGGGACATGGGTGTGCCCTAACCCAGGATCCCCAGGCCCAGGGGAAGAGGGACGTGTGCCATTGTAGGCTTCTTCCAACCCTTTCTAGGCACGTCCTTGGCTACCTCACCCTCTCCCAAATGCAGCCCATAATCATGAGTCCTGGCATGCTGGAGAAGAGGTGGGCAGGACACTTACGTGCAGGCAGGCCCTTTGACGCCGGTCCCACAGCCGTACAACACCGTAGTAGGAGGAACCTGTGGCCAGCAGGT
CircID chr10:101611321|101611702
ORF Type ORF7
Protein Length 29
Nucleotide Length 90
Protein Sequence MVVRRRQYTGLLRGVDVSGKAWKGGHRKW
Nucleotide Sequence TTGGTGGTGAGACGCAGGCAGTACACAGGGCTGCTGAGGGGAGTCGACGTCAGCGGGAAGGCCTGGAAGGGAGGGCACAGGAAGTGGTAA
CircID chr10:101611321|101611702
ORF Type ORF8
Protein Length 37
Nucleotide Length 111
Protein Sequence MACWRRGGQDTYVQAGPLTPVPQPYNTVVGGTCGQQV
Nucleotide Sequence CTGGCATGCTGGAGAAGAGGTGGGCAGGACACTTACGTGCAGGCAGGCCCTTTGACGCCGGTCCCACAGCCGTACAACACCGTAGTAGGAGGAACCTGTGGCCAGCAGGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab