CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102370414|102370808
Strand +
CircType exon
Host Gene ENSG00000107862.4;
Algorism CIRI2;
Sequence CCCACCACTGCCCGCTCCACAAGGAAGCAGAAATCTTGTGCCTGAACACAGAGGTGGTATAGATGGTCTCGAACAGTCTGCCACACACAGCCCACACGATCCCTGTGTAGACATAAAGGAATGAAGATAGTCTCAGCCAGAGGGGCCACTGGGCAACAGGTCCCCTAGGCCTTTCAGGACTCATTGGTATTATACCCTAAGTAGACAGGTATGATGAGTAAGCTTCTCCCCTGCTGCCTACAGTTCCCCAGAGCCCACTCAGCAAGATGGCTTCCATCCCTTTGGCACAAGCCCAGCATGGGGTCTGCCTAAAGACTACGCTCATCTTACCTGTTCTCCAACACAATCCTTAGCAGCATCTCTAGGCAGAAAGCAGCATCTTCCTCATCATATGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102370414|102370808 hsa-miR-34a-5p 0 0 1
chr10:102370414|102370808 hsa-miR-34a-3p 0 0 1
chr10:102370414|102370808 hsa-miR-214-5p 0 0 1
chr10:102370414|102370808 hsa-miR-214-3p 0 0 1
chr10:102370414|102370808 hsa-miR-149-5p 0 0 1
chr10:102370414|102370808 hsa-miR-149-3p 0 0 1
chr10:102370414|102370808 hsa-miR-374a-5p 0 0 1
chr10:102370414|102370808 hsa-miR-374a-3p 0 0 1
chr10:102370414|102370808 hsa-miR-326 0 0 1
chr10:102370414|102370808 hsa-miR-449a 0 0 1
chr10:102370414|102370808 hsa-miR-487a-5p 0 0 1
chr10:102370414|102370808 hsa-miR-487a-3p 0 0 1
chr10:102370414|102370808 hsa-miR-488-5p 0 0 1
chr10:102370414|102370808 hsa-miR-488-3p 0 0 1
chr10:102370414|102370808 hsa-miR-492 0 0 1
chr10:102370414|102370808 hsa-miR-620 0 0 1
chr10:102370414|102370808 hsa-miR-637 0 0 1
chr10:102370414|102370808 hsa-miR-638 1 1 1
chr10:102370414|102370808 hsa-miR-449b-5p 0 0 1
chr10:102370414|102370808 hsa-miR-449b-3p 0 0 1
chr10:102370414|102370808 hsa-miR-1298-5p 0 0 1
chr10:102370414|102370808 hsa-miR-1298-3p 0 0 1
chr10:102370414|102370808 hsa-miR-541-5p 0 0 1
chr10:102370414|102370808 hsa-miR-541-3p 0 0 1
chr10:102370414|102370808 hsa-miR-374b-5p 0 0 1
chr10:102370414|102370808 hsa-miR-374b-3p 0 0 1
chr10:102370414|102370808 hsa-miR-760 1 1 1
chr10:102370414|102370808 hsa-miR-934 0 0 1
chr10:102370414|102370808 hsa-miR-940 0 0 1
chr10:102370414|102370808 hsa-miR-1183 1 1 1
chr10:102370414|102370808 hsa-miR-1227-5p 0 0 1
chr10:102370414|102370808 hsa-miR-1227-3p 0 0 1
chr10:102370414|102370808 hsa-miR-663b 0 1 1
chr10:102370414|102370808 hsa-miR-1270 0 0 1
chr10:102370414|102370808 hsa-miR-1272 0 0 1
chr10:102370414|102370808 hsa-miR-1284 0 0 1
chr10:102370414|102370808 hsa-miR-1322 0 0 1
chr10:102370414|102370808 hsa-miR-671-5p 1 1 1
chr10:102370414|102370808 hsa-miR-654-5p 0 0 1
chr10:102370414|102370808 hsa-miR-502-5p 0 0 1
chr10:102370414|102370808 hsa-miR-654-3p 0 0 1
chr10:102370414|102370808 hsa-miR-628-5p 0 0 1
chr10:102370414|102370808 hsa-miR-330-5p 0 0 1
chr10:102370414|102370808 hsa-miR-34c-5p 0 0 1
chr10:102370414|102370808 hsa-miR-516a-3p 0 1 1
chr10:102370414|102370808 hsa-miR-369-3p 0 0 1
chr10:102370414|102370808 hsa-miR-220c 0 0 1
chr10:102370414|102370808 hsa-miR-644 0 0 1
chr10:102370414|102370808 hsa-miR-544 0 0 1
chr10:102370414|102370808 hsa-miR-147 0 0 1
chr10:102370414|102370808 hsa-miR-608 1 0 0
chr10:102370414|102370808 hsa-miR-762 1 0 0
chr10:102370414|102370808 hsa-miR-761 0 1 0
chr10:102370414|102370808 hsa-miR-920 1 1 0
chr10:102370414|102370808 hsa-miR-3147 1 0 0
chr10:102370414|102370808 hsa-miR-3188 1 0 0
chr10:102370414|102370808 hsa-miR-4322 1 1 0
chr10:102370414|102370808 hsa-miR-4265 1 0 0
chr10:102370414|102370808 hsa-miR-4280 0 1 0
chr10:102370414|102370808 hsa-miR-3649 0 1 0
chr10:102370414|102370808 hsa-miR-3714 1 0 0
chr10:102370414|102370808 hsa-miR-3911 1 0 0
chr10:102370414|102370808 hsa-miR-378g 0 1 0
chr10:102370414|102370808 hsa-miR-4471 0 1 0
chr10:102370414|102370808 hsa-miR-4481 1 1 0
chr10:102370414|102370808 hsa-miR-4494 0 1 0
chr10:102370414|102370808 hsa-miR-4498 1 0 0
chr10:102370414|102370808 hsa-miR-4502 0 1 0
chr10:102370414|102370808 hsa-miR-4505 1 0 0
chr10:102370414|102370808 hsa-miR-4507 1 0 0
chr10:102370414|102370808 hsa-miR-4651 1 0 0
chr10:102370414|102370808 hsa-miR-4654 1 0 0
chr10:102370414|102370808 hsa-miR-4656 1 0 0
chr10:102370414|102370808 hsa-miR-4658 1 0 0
chr10:102370414|102370808 hsa-miR-4663 1 0 0
chr10:102370414|102370808 hsa-miR-4674 1 0 0
chr10:102370414|102370808 hsa-miR-4675 1 1 0
chr10:102370414|102370808 hsa-miR-4721 1 0 0
chr10:102370414|102370808 hsa-miR-5787 1 0 0
chr10:102370414|102370808 hsa-miR-6745 1 0 0
chr10:102370414|102370808 hsa-miR-8052 1 1 0
chr10:102370414|102370808 hsa-miR-8059 0 1 0
chr10:102370414|102370808 hsa-miR-8077 1 1 0
chr10:102370414|102370808 hsa-miR-8089 1 1 0
chr10:102370414|102370808 hsa-miR-9718 1 0 0
chr10:102370414|102370808 hsa-miR-11400 1 0 0
chr10:102370414|102370808 hsa-miR-135a-3p 1 1 0
chr10:102370414|102370808 hsa-miR-15a-3p 0 1 0
chr10:102370414|102370808 hsa-miR-4731-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6747-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6861-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6825-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6510-5p 0 1 0
chr10:102370414|102370808 hsa-miR-6728-5p 1 0 0
chr10:102370414|102370808 hsa-miR-5187-5p 1 0 0
chr10:102370414|102370808 hsa-miR-7114-5p 1 0 0
chr10:102370414|102370808 hsa-miR-3192-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6757-5p 1 1 0
chr10:102370414|102370808 hsa-miR-7847-3p 1 0 0
chr10:102370414|102370808 hsa-miR-7160-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6806-5p 0 1 0
chr10:102370414|102370808 hsa-miR-6759-5p 1 0 0
chr10:102370414|102370808 hsa-miR-5589-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6776-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6768-5p 0 1 0
chr10:102370414|102370808 hsa-miR-6748-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6772-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6793-5p 1 1 0
chr10:102370414|102370808 hsa-miR-6798-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6782-5p 1 0 0
chr10:102370414|102370808 hsa-miR-1226-5p 1 0 0
chr10:102370414|102370808 hsa-miR-185-5p 1 0 0
chr10:102370414|102370808 hsa-miR-4786-3p 1 1 0
chr10:102370414|102370808 hsa-miR-1229-5p 1 0 0
chr10:102370414|102370808 hsa-miR-885-3p 1 0 0
chr10:102370414|102370808 hsa-miR-296-3p 1 0 0
chr10:102370414|102370808 hsa-miR-6824-5p 0 1 0
chr10:102370414|102370808 hsa-miR-3162-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6877-5p 1 0 0
chr10:102370414|102370808 hsa-miR-1910-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6769b-5p 1 0 0
chr10:102370414|102370808 hsa-miR-1343-5p 1 0 0
chr10:102370414|102370808 hsa-miR-5001-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6726-5p 1 1 0
chr10:102370414|102370808 hsa-miR-6737-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6754-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6756-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6819-5p 1 0 0
chr10:102370414|102370808 hsa-miR-10401-5p 1 1 0
chr10:102370414|102370808 hsa-miR-6722-3p 0 1 0
chr10:102370414|102370808 hsa-miR-6763-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6779-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6780a-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6797-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6808-5p 1 0 0
chr10:102370414|102370808 hsa-miR-892c-3p 1 0 0
chr10:102370414|102370808 hsa-miR-3620-5p 1 1 0
chr10:102370414|102370808 hsa-miR-4728-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6780b-5p 1 0 0
chr10:102370414|102370808 hsa-miR-1909-3p 0 1 0
chr10:102370414|102370808 hsa-miR-4632-5p 1 0 0
chr10:102370414|102370808 hsa-miR-4726-5p 1 0 0
chr10:102370414|102370808 hsa-miR-4745-5p 1 1 0
chr10:102370414|102370808 hsa-miR-6794-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6795-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6846-5p 1 0 0
chr10:102370414|102370808 hsa-miR-3187-5p 1 0 0
chr10:102370414|102370808 hsa-miR-939-5p 1 1 0
chr10:102370414|102370808 hsa-miR-4758-5p 1 1 0
chr10:102370414|102370808 hsa-miR-365b-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6511a-5p 0 1 0
chr10:102370414|102370808 hsa-miR-3940-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6731-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6855-5p 1 0 0
chr10:102370414|102370808 hsa-miR-4700-5p 0 1 0
chr10:102370414|102370808 hsa-miR-4747-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6750-5p 1 0 0
chr10:102370414|102370808 hsa-miR-1185-2-3p 1 0 0
chr10:102370414|102370808 hsa-miR-4667-5p 1 1 0
chr10:102370414|102370808 hsa-miR-6790-5p 1 0 0
chr10:102370414|102370808 hsa-miR-6791-5p 1 0 0
chr10:102370414|102370808 hsa-miR-550a-5p 1 0 0
chr10:102370414|102370808 hsa-miR-10400-3p 1 0 0
chr10:102370414|102370808 hsa-miR-6715b-5p 0 1 0
chr10:102370414|102370808 hsa-miR-708-5p 0 1 0
chr10:102370414|102370808 hsa-miR-516b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:102370414|102370808
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MMSKLLPCCLQFPRAHSARWLPSLWHKPSMGSA
Nucleotide Sequence ATGATGAGTAAGCTTCTCCCCTGCTGCCTACAGTTCCCCAGAGCCCACTCAGCAAGATGGCTTCCATCCCTTTGGCACAAGCCCAGCATGGGGTCTGCCTAA
CircID chr10:102370414|102370808
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MPAPQGSRNLVPEHRGGIDGLEQSATHSPHDPCVDIKE
Nucleotide Sequence CTGCCCGCTCCACAAGGAAGCAGAAATCTTGTGCCTGAACACAGAGGTGGTATAGATGGTCTCGAACAGTCTGCCACACACAGCCCACACGATCCCTGTGTAGACATAAAGGAATGA
CircID chr10:102370414|102370808
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MPKDYAHLTCSPTQSLAASLGRKQHLPHHM
Nucleotide Sequence CTGCCTAAAGACTACGCTCATCTTACCTGTTCTCCAACACAATCCTTAGCAGCATCTCTAGGCAGAAAGCAGCATCTTCCTCATCATATG
CircID chr10:102370414|102370808
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MLPTVPQSPLSKMASIPLAQAQHGVCLKTTLILPVLQHNP
Nucleotide Sequence CTGCTGCCTACAGTTCCCCAGAGCCCACTCAGCAAGATGGCTTCCATCCCTTTGGCACAAGCCCAGCATGGGGTCTGCCTAAAGACTACGCTCATCTTACCTGTTCTCCAACACAATCCTTAG
CircID chr10:102370414|102370808
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MLGLCQRDGSHLAEWALGNCRQQGRSLLIIPVYLGYNTNES
Nucleotide Sequence ATGCTGGGCTTGTGCCAAAGGGATGGAAGCCATCTTGCTGAGTGGGCTCTGGGGAACTGTAGGCAGCAGGGGAGAAGCTTACTCATCATACCTGTCTACTTAGGGTATAATACCAATGAGTCCTGA
CircID chr10:102370414|102370808
ORF Type ORF6
Protein Length 46
Nucleotide Length 138
Protein Sequence MAETIFIPLCLHRDRVGCVWQTVRDHLYHLCVQAQDFCFLVERAVV
Nucleotide Sequence CTGGCTGAGACTATCTTCATTCCTTTATGTCTACACAGGGATCGTGTGGGCTGTGTGTGGCAGACTGTTCGAGACCATCTATACCACCTCTGTGTTCAGGCACAAGATTTCTGCTTCCTTGTGGAGCGGGCAGTGGTG
CircID chr10:102370414|102370808
ORF Type ORF7
Protein Length 49
Nucleotide Length 150
Protein Sequence MCWRTGKMSVVFRQTPCWACAKGMEAILLSGLWGTVGSRGEAYSSYLST
Nucleotide Sequence TTGTGTTGGAGAACAGGTAAGATGAGCGTAGTCTTTAGGCAGACCCCATGCTGGGCTTGTGCCAAAGGGATGGAAGCCATCTTGCTGAGTGGGCTCTGGGGAACTGTAGGCAGCAGGGGAGAAGCTTACTCATCATACCTGTCTACTTAG
CircID chr10:102370414|102370808
ORF Type ORF8
Protein Length 61
Nucleotide Length 183
Protein Sequence MSPERPRGPVAQWPLWLRLSSFLYVYTGIVWAVCGRLFETIYTTSVFRHKISASLWSGQWW
Nucleotide Sequence ATGAGTCCTGAAAGGCCTAGGGGACCTGTTGCCCAGTGGCCCCTCTGGCTGAGACTATCTTCATTCCTTTATGTCTACACAGGGATCGTGTGGGCTGTGTGTGGCAGACTGTTCGAGACCATCTATACCACCTCTGTGTTCAGGCACAAGATTTCTGCTTCCTTGTGGAGCGGGCAGTGGTGG
CircID chr10:102370414|102370808
ORF Type ORF9
Protein Length 38
Nucleotide Length 114
Protein Sequence MSTQGSCGLCVADCSRPSIPPLCSGTRFLLPCGAGSGG
Nucleotide Sequence ATGTCTACACAGGGATCGTGTGGGCTGTGTGTGGCAGACTGTTCGAGACCATCTATACCACCTCTGTGTTCAGGCACAAGATTTCTGCTTCCTTGTGGAGCGGGCAGTGGTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab