CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102398444|102398823
Strand -
CircType exon
Host Gene ENSG00000077150.16;
Algorism CIRI2;
Sequence AGTGTTTCTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTCCAAACAGTTCACCTATTACCCTCTGGTGGAAGGTGGAGCTGGGCTGAGGACCTCAGGGTGCTGGCGGGGGGCCAGGCTGGGCTAGAAGAAGGTCCCAAGAGCTAGATGTGGGGATGCATGAGCCAAGTCAGAAGTGCGAGGGTCCCAGGAGGTGCTTCCTAGGAGCCGGCCCTGAGGGCTCTTCTGGGAAGGGCCCCTGAGGCATGACACAATAACTGGGCTCAATCTCATTTTCCTCTGCCCCCAGACAAGGAAGAGGTGCAGCGGAAGCGGAGGAAGGCCTTGCCCACCTTCTCCCAGCCCTTCGGGGGTGGCTCCCACATGGGTGGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102398444|102398823 hsa-miR-345-5p 0 0 1
chr10:102398444|102398823 hsa-miR-345-3p 0 0 1
chr10:102398444|102398823 hsa-miR-452-5p 0 0 1
chr10:102398444|102398823 hsa-miR-452-3p 0 0 1
chr10:102398444|102398823 hsa-miR-572 0 0 1
chr10:102398444|102398823 hsa-miR-592 0 0 1
chr10:102398444|102398823 hsa-miR-597-5p 0 0 1
chr10:102398444|102398823 hsa-miR-597-3p 0 0 1
chr10:102398444|102398823 hsa-miR-599 0 0 1
chr10:102398444|102398823 hsa-miR-632 0 0 1
chr10:102398444|102398823 hsa-miR-635 0 0 1
chr10:102398444|102398823 hsa-miR-637 1 0 1
chr10:102398444|102398823 hsa-miR-298 0 0 1
chr10:102398444|102398823 hsa-miR-541-5p 0 0 1
chr10:102398444|102398823 hsa-miR-541-3p 0 0 1
chr10:102398444|102398823 hsa-miR-920 0 0 1
chr10:102398444|102398823 hsa-miR-1231 0 1 1
chr10:102398444|102398823 hsa-miR-1236-5p 0 0 1
chr10:102398444|102398823 hsa-miR-1236-3p 0 0 1
chr10:102398444|102398823 hsa-miR-1248 0 1 1
chr10:102398444|102398823 hsa-miR-1266-5p 0 0 1
chr10:102398444|102398823 hsa-miR-1266-3p 0 0 1
chr10:102398444|102398823 hsa-miR-1324 0 0 1
chr10:102398444|102398823 hsa-miR-1225-3p 1 0 1
chr10:102398444|102398823 hsa-miR-486-3p 0 0 1
chr10:102398444|102398823 hsa-miR-299-3p 0 0 1
chr10:102398444|102398823 hsa-miR-324-5p 0 0 1
chr10:102398444|102398823 hsa-miR-654-5p 0 0 1
chr10:102398444|102398823 hsa-miR-502-5p 0 0 1
chr10:102398444|102398823 hsa-miR-125a-5p 0 1 1
chr10:102398444|102398823 hsa-miR-1302 0 0 1
chr10:102398444|102398823 hsa-miR-1233 0 0 1
chr10:102398444|102398823 hsa-miR-125b 0 0 1
chr10:102398444|102398823 hsa-miR-24 0 0 1
chr10:102398444|102398823 hsa-miR-612 0 1 0
chr10:102398444|102398823 hsa-miR-661 0 1 0
chr10:102398444|102398823 hsa-miR-662 1 0 0
chr10:102398444|102398823 hsa-miR-658 0 1 0
chr10:102398444|102398823 hsa-miR-762 0 1 0
chr10:102398444|102398823 hsa-miR-1470 1 1 0
chr10:102398444|102398823 hsa-miR-3125 0 1 0
chr10:102398444|102398823 hsa-miR-3132 1 0 0
chr10:102398444|102398823 hsa-miR-544b 0 1 0
chr10:102398444|102398823 hsa-miR-3142 0 1 0
chr10:102398444|102398823 hsa-miR-4258 0 1 0
chr10:102398444|102398823 hsa-miR-3646 1 0 0
chr10:102398444|102398823 hsa-miR-3916 0 1 0
chr10:102398444|102398823 hsa-miR-3945 1 0 0
chr10:102398444|102398823 hsa-miR-4498 0 1 0
chr10:102398444|102398823 hsa-miR-4518 0 1 0
chr10:102398444|102398823 hsa-miR-4689 1 0 0
chr10:102398444|102398823 hsa-miR-4706 1 1 0
chr10:102398444|102398823 hsa-miR-4739 1 0 0
chr10:102398444|102398823 hsa-miR-5685 0 1 0
chr10:102398444|102398823 hsa-miR-5703 0 1 0
chr10:102398444|102398823 hsa-miR-5787 1 1 0
chr10:102398444|102398823 hsa-miR-6085 0 1 0
chr10:102398444|102398823 hsa-miR-8089 1 0 0
chr10:102398444|102398823 hsa-miR-149-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6510-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6089 1 0 0
chr10:102398444|102398823 hsa-miR-3192-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6746-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6875-3p 1 0 0
chr10:102398444|102398823 hsa-miR-6727-5p 0 1 0
chr10:102398444|102398823 hsa-miR-197-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6849-3p 1 1 0
chr10:102398444|102398823 hsa-miR-6841-3p 1 0 0
chr10:102398444|102398823 hsa-miR-4725-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6827-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6798-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6760-5p 1 1 0
chr10:102398444|102398823 hsa-miR-2467-3p 1 1 0
chr10:102398444|102398823 hsa-miR-1343-3p 1 1 0
chr10:102398444|102398823 hsa-miR-6852-5p 0 1 0
chr10:102398444|102398823 hsa-miR-939-3p 1 0 0
chr10:102398444|102398823 hsa-miR-6803-3p 1 1 0
chr10:102398444|102398823 hsa-miR-30c-2-3p 0 1 0
chr10:102398444|102398823 hsa-miR-296-3p 0 1 0
chr10:102398444|102398823 hsa-miR-3667-3p 0 1 0
chr10:102398444|102398823 hsa-miR-6847-5p 0 1 0
chr10:102398444|102398823 hsa-miR-659-5p 0 1 0
chr10:102398444|102398823 hsa-miR-3160-3p 1 0 0
chr10:102398444|102398823 hsa-miR-4446-3p 0 1 0
chr10:102398444|102398823 hsa-miR-6736-3p 0 1 0
chr10:102398444|102398823 hsa-miR-3065-3p 0 1 0
chr10:102398444|102398823 hsa-miR-4708-3p 0 1 0
chr10:102398444|102398823 hsa-miR-4687-5p 0 1 0
chr10:102398444|102398823 hsa-miR-5571-3p 0 1 0
chr10:102398444|102398823 hsa-miR-2114-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6513-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6871-3p 0 1 0
chr10:102398444|102398823 hsa-miR-6826-3p 0 1 0
chr10:102398444|102398823 hsa-miR-5088-3p 1 0 0
chr10:102398444|102398823 hsa-miR-3670 1 0 0
chr10:102398444|102398823 hsa-miR-3620-3p 0 1 0
chr10:102398444|102398823 hsa-miR-222-3p 1 0 0
chr10:102398444|102398823 hsa-miR-6847-3p 0 1 0
chr10:102398444|102398823 hsa-miR-1233-5p 1 0 0
chr10:102398444|102398823 hsa-miR-4763-3p 1 0 0
chr10:102398444|102398823 hsa-miR-6775-5p 0 1 0
chr10:102398444|102398823 hsa-miR-1343-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6743-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6803-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6751-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6779-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6788-5p 0 1 0
chr10:102398444|102398823 hsa-miR-6879-5p 0 1 0
chr10:102398444|102398823 hsa-miR-3620-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6780b-5p 0 1 0
chr10:102398444|102398823 hsa-miR-1237-5p 1 0 0
chr10:102398444|102398823 hsa-miR-328-5p 1 0 0
chr10:102398444|102398823 hsa-miR-4726-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6846-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6848-5p 1 0 0
chr10:102398444|102398823 hsa-miR-30c-1-3p 0 1 0
chr10:102398444|102398823 hsa-miR-1199-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6773-5p 1 0 0
chr10:102398444|102398823 hsa-miR-10398-3p 0 1 0
chr10:102398444|102398823 hsa-miR-4667-5p 1 0 0
chr10:102398444|102398823 hsa-miR-6724-5p 1 0 0
chr10:102398444|102398823 hsa-miR-4722-3p 1 1 0
chr10:102398444|102398823 hsa-miR-485-3p 1 0 0
chr10:102398444|102398823 hsa-miR-6783-3p 0 1 0
chr10:102398444|102398823 hsa-miR-1234-3p 0 1 0
chr10:102398444|102398823 hsa-miR-4690-3p 1 1 0
chr10:102398444|102398823 hsa-miR-6814-3p 1 0 0
chr10:102398444|102398823 hsa-miR-412-3p 0 1 0
chr10:102398444|102398823 hsa-miR-125b-5p 0 1 0
chr10:102398444|102398823 hsa-miR-498-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:102398444|102398823
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPPDKEEVQRKRRKALPTFSQPFGGGSHMGG
Nucleotide Sequence CTGCCCCCAGACAAGGAAGAGGTGCAGCGGAAGCGGAGGAAGGCCTTGCCCACCTTCTCCCAGCCCTTCGGGGGTGGCTCCCACATGGGTGGA

CircID chr10:102398444|102398823
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MQLKRKRGGDVSDSKQFTYYPLVEGGAGLRTSGCWRGARLG
Nucleotide Sequence CTGCAACTGAAACGCAAGCGAGGAGGGGACGTGTCTGATTCCAAACAGTTCACCTATTACCCTCTGGTGGAAGGTGGAGCTGGGCTGAGGACCTCAGGGTGCTGGCGGGGGGCCAGGCTGGGCTAG

CircID chr10:102398444|102398823
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MRHDTITGLNLIFLCPQTRKRCSGSGGRPCPPSPSPSGVAPTWVE
Nucleotide Sequence CTGAGGCATGACACAATAACTGGGCTCAATCTCATTTTCCTCTGCCCCCAGACAAGGAAGAGGTGCAGCGGAAGCGGAGGAAGGCCTTGCCCACCTTCTCCCAGCCCTTCGGGGGTGGCTCCCACATGGGTGGAG

CircID chr10:102398444|102398823
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MHEPSQKCEGPRRCFLGAGPEGSSGKGP
Nucleotide Sequence ATGCATGAGCCAAGTCAGAAGTGCGAGGGTCCCAGGAGGTGCTTCCTAGGAGCCGGCCCTGAGGGCTCTTCTGGGAAGGGCCCCTGA

CircID chr10:102398444|102398823
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MGSISFSSAPRQGRGAAEAEEGLAHLLPALRGWLPHGWR
Nucleotide Sequence CTGGGCTCAATCTCATTTTCCTCTGCCCCCAGACAAGGAAGAGGTGCAGCGGAAGCGGAGGAAGGCCTTGCCCACCTTCTCCCAGCCCTTCGGGGGTGGCTCCCACATGGGTGGAGG

CircID chr10:102398444|102398823
ORF Type ORF6
Protein Length 31
Nucleotide Length 96
Protein Sequence MWEPPPKGWEKVGKAFLRFRCTSSLSGGRGK
Nucleotide Sequence ATGTGGGAGCCACCCCCGAAGGGCTGGGAGAAGGTGGGCAAGGCCTTCCTCCGCTTCCGCTGCACCTCTTCCTTGTCTGGGGGCAGAGGAAAATGA

CircID chr10:102398444|102398823
ORF Type ORF7
Protein Length 29
Nucleotide Length 90
Protein Sequence MGPSSSPAWPPASTLRSSAQLHLPPEGNR
Nucleotide Sequence TTGGGACCTTCTTCTAGCCCAGCCTGGCCCCCCGCCAGCACCCTGAGGTCCTCAGCCCAGCTCCACCTTCCACCAGAGGGTAATAGGTGA

CircID chr10:102398444|102398823
ORF Type ORF8
Protein Length 39
Nucleotide Length 120
Protein Sequence MGAEENEIEPSYCVMPQGPFPEEPSGPAPRKHLLGPSHF
Nucleotide Sequence CTGGGGGCAGAGGAAAATGAGATTGAGCCCAGTTATTGTGTCATGCCTCAGGGGCCCTTCCCAGAAGAGCCCTCAGGGCCGGCTCCTAGGAAGCACCTCCTGGGACCCTCGCACTTCTGA

CircID chr10:102398444|102398823
ORF Type ORF9
Protein Length 72
Nucleotide Length 219
Protein Sequence MGEGGQGLPPLPLHLFLVWGQRKMRLSPVIVSCLRGPSQKSPQGRLLGSTSWDPRTSDLAHASPHLALGTFF
Nucleotide Sequence CTGGGAGAAGGTGGGCAAGGCCTTCCTCCGCTTCCGCTGCACCTCTTCCTTGTCTGGGGGCAGAGGAAAATGAGATTGAGCCCAGTTATTGTGTCATGCCTCAGGGGCCCTTCCCAGAAGAGCCCTCAGGGCCGGCTCCTAGGAAGCACCTCCTGGGACCCTCGCACTTCTGACTTGGCTCATGCATCCCCACATCTAGCTCTTGGGACCTTCTTCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites