CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102400105|102400324
Strand -
CircType exon
Host Gene ENSG00000077150.16;
Algorism CIRI2;
Sequence GGGCAGACCAGTGTCATTGAGCAGATAGTCTATGTCATCCACCACGCCCAGGACCTCGGCGTTGTCAACCTCACCAACCACCTGCACCAGGTGCGGGGGCGCCTACTGGGGAGGTGGGAGGGGTTGGAAGGCAAGTGGGTCTCGGGCCTGGCTCACCCTGCTTTCATCCCCAGACGCCCCTGCACCTGGCGGTGATCACGGGGCAGACGAGTGTGGTGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102400105|102400324 hsa-miR-197-5p 0 0 1
chr10:102400105|102400324 hsa-miR-197-3p 0 0 1
chr10:102400105|102400324 hsa-miR-376c-5p 0 0 1
chr10:102400105|102400324 hsa-miR-376c-3p 0 0 1
chr10:102400105|102400324 hsa-miR-346 0 1 1
chr10:102400105|102400324 hsa-miR-425-5p 0 0 1
chr10:102400105|102400324 hsa-miR-425-3p 0 0 1
chr10:102400105|102400324 hsa-miR-563 0 1 1
chr10:102400105|102400324 hsa-miR-585-5p 0 0 1
chr10:102400105|102400324 hsa-miR-585-3p 0 0 1
chr10:102400105|102400324 hsa-miR-637 0 0 1
chr10:102400105|102400324 hsa-miR-657 0 0 1
chr10:102400105|102400324 hsa-miR-1294 0 1 1
chr10:102400105|102400324 hsa-miR-1255a 0 0 1
chr10:102400105|102400324 hsa-miR-532-3p 0 1 1
chr10:102400105|102400324 hsa-miR-1224-3p 0 1 1
chr10:102400105|102400324 hsa-miR-767-3p 0 1 1
chr10:102400105|102400324 hsa-miR-876-3p 0 0 1
chr10:102400105|102400324 hsa-miR-324-3p 0 0 1
chr10:102400105|102400324 hsa-miR-220b 0 0 1
chr10:102400105|102400324 hsa-miR-1260 0 0 1
chr10:102400105|102400324 hsa-miR-1280 0 0 1
chr10:102400105|102400324 hsa-miR-1255b 0 0 1
chr10:102400105|102400324 hsa-miR-1268 0 0 1
chr10:102400105|102400324 hsa-miR-549 0 0 1
chr10:102400105|102400324 hsa-miR-484 1 0 0
chr10:102400105|102400324 hsa-miR-1260a 0 1 0
chr10:102400105|102400324 hsa-miR-1268a 1 1 0
chr10:102400105|102400324 hsa-miR-1538 1 0 0
chr10:102400105|102400324 hsa-miR-1913 0 1 0
chr10:102400105|102400324 hsa-miR-3165 0 1 0
chr10:102400105|102400324 hsa-miR-1268b 1 1 0
chr10:102400105|102400324 hsa-miR-4486 0 1 0
chr10:102400105|102400324 hsa-miR-4663 1 0 0
chr10:102400105|102400324 hsa-miR-6086 0 1 0
chr10:102400105|102400324 hsa-miR-8089 0 1 0
chr10:102400105|102400324 hsa-miR-9986 0 1 0
chr10:102400105|102400324 hsa-miR-4747-3p 1 1 0
chr10:102400105|102400324 hsa-miR-92a-1-5p 1 0 0
chr10:102400105|102400324 hsa-miR-6894-5p 1 0 0
chr10:102400105|102400324 hsa-miR-6857-5p 0 1 0
chr10:102400105|102400324 hsa-miR-6510-5p 0 1 0
chr10:102400105|102400324 hsa-miR-6744-5p 0 1 0
chr10:102400105|102400324 hsa-miR-7160-5p 1 1 0
chr10:102400105|102400324 hsa-miR-3663-5p 0 1 0
chr10:102400105|102400324 hsa-miR-7855-5p 0 1 0
chr10:102400105|102400324 hsa-miR-6735-3p 1 0 0
chr10:102400105|102400324 hsa-miR-3691-5p 1 1 0
chr10:102400105|102400324 hsa-miR-1306-5p 0 1 0
chr10:102400105|102400324 hsa-miR-6769a-3p 0 1 0
chr10:102400105|102400324 hsa-miR-3681-5p 1 0 0
chr10:102400105|102400324 hsa-miR-6887-3p 0 1 0
chr10:102400105|102400324 hsa-miR-4749-3p 0 1 0
chr10:102400105|102400324 hsa-miR-6846-3p 1 1 0
chr10:102400105|102400324 hsa-miR-6789-3p 0 1 0
chr10:102400105|102400324 hsa-miR-7158-5p 1 1 0
chr10:102400105|102400324 hsa-miR-4763-3p 0 1 0
chr10:102400105|102400324 hsa-miR-6803-5p 1 0 0
chr10:102400105|102400324 hsa-miR-6722-3p 0 1 0
chr10:102400105|102400324 hsa-miR-5189-5p 1 0 0
chr10:102400105|102400324 hsa-miR-1909-3p 0 1 0
chr10:102400105|102400324 hsa-miR-377-5p 0 1 0
chr10:102400105|102400324 hsa-miR-4700-5p 0 1 0
chr10:102400105|102400324 hsa-miR-4667-5p 0 1 0
chr10:102400105|102400324 hsa-miR-6511a-3p 0 1 0
chr10:102400105|102400324 hsa-miR-6511b-3p 0 1 0
chr10:102400105|102400324 hsa-miR-7114-3p 0 1 0
chr10:102400105|102400324 hsa-miR-1234-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:102400105|102400324
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MHQVRGRLLGRWEGLEGKWVSGLAHPAFIPRRPCTWR
Nucleotide Sequence CTGCACCAGGTGCGGGGGCGCCTACTGGGGAGGTGGGAGGGGTTGGAAGGCAAGTGGGTCTCGGGCCTGGCTCACCCTGCTTTCATCCCCAGACGCCCCTGCACCTGGCGGTGA

CircID chr10:102400105|102400324
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence MSSTTPRTSALSTSPTTCTRCGGAYWGGGRGWKASGSRAWLTLLSSPDAPAPGGDHGADECGE
Nucleotide Sequence ATGTCATCCACCACGCCCAGGACCTCGGCGTTGTCAACCTCACCAACCACCTGCACCAGGTGCGGGGGCGCCTACTGGGGAGGTGGGAGGGGTTGGAAGGCAAGTGGGTCTCGGGCCTGGCTCACCCTGCTTTCATCCCCAGACGCCCCTGCACCTGGCGGTGATCACGGGGCAGACGAGTGTGGTGAG

CircID chr10:102400105|102400324
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MVQVVGEVDNAEVLGVVDDIDYLLNDTGLP
Nucleotide Sequence CTGGTGCAGGTGGTTGGTGAGGTTGACAACGCCGAGGTCCTGGGCGTGGTGGATGACATAGACTATCTGCTCAATGACACTGGTCTGCCC

CircID chr10:102400105|102400324
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MPSNPSHLPSRRPRTWCRWLVRLTTPRSWAWWMT
Nucleotide Sequence TTGCCTTCCAACCCCTCCCACCTCCCCAGTAGGCGCCCCCGCACCTGGTGCAGGTGGTTGGTGAGGTTGACAACGCCGAGGTCCTGGGCGTGGTGGATGACATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites