CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102400375|102400541
Strand +
CircType exon
Host Gene ENSG00000077150.16;
Algorism CIRI2;
Sequence CCTCCCTGGTCCCCGCCTGCCCCCTTAGTCAGGTGAGATGGGGAGCTCACCCTCAAAGTCAGGCATATGCAACAGCTGGGGCACAGCAGGAGCTCCACTCTGAAGCAGTGCACGCAGCAGCTCAGGAGCACCAGCGCCTGCCCGCAGCGCCAGATGCATGGCTGAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102400375|102400541 hsa-miR-370-5p 0 0 1
chr10:102400375|102400541 hsa-miR-370-3p 0 0 1
chr10:102400375|102400541 hsa-miR-448 1 0 1
chr10:102400375|102400541 hsa-miR-558 0 1 1
chr10:102400375|102400541 hsa-miR-1229-5p 0 0 1
chr10:102400375|102400541 hsa-miR-1229-3p 0 0 1
chr10:102400375|102400541 hsa-miR-1200 0 1 1
chr10:102400375|102400541 hsa-miR-1304-5p 0 0 1
chr10:102400375|102400541 hsa-miR-1304-3p 0 0 1
chr10:102400375|102400541 hsa-miR-1321 0 0 1
chr10:102400375|102400541 hsa-miR-512-5p 0 1 1
chr10:102400375|102400541 hsa-miR-486-3p 0 1 1
chr10:102400375|102400541 hsa-miR-532-5p 0 0 1
chr10:102400375|102400541 hsa-miR-153 0 0 1
chr10:102400375|102400541 hsa-miR-138 0 0 1
chr10:102400375|102400541 hsa-miR-1201 0 0 1
chr10:102400375|102400541 hsa-miR-663 0 0 1
chr10:102400375|102400541 hsa-miR-612 1 0 0
chr10:102400375|102400541 hsa-miR-639 1 1 0
chr10:102400375|102400541 hsa-miR-663a 0 1 0
chr10:102400375|102400541 hsa-miR-3907 0 1 0
chr10:102400375|102400541 hsa-miR-4706 1 0 0
chr10:102400375|102400541 hsa-miR-4734 0 1 0
chr10:102400375|102400541 hsa-miR-4767 1 0 0
chr10:102400375|102400541 hsa-miR-12115 0 1 0
chr10:102400375|102400541 hsa-miR-12125 0 1 0
chr10:102400375|102400541 hsa-miR-3157-5p 0 1 0
chr10:102400375|102400541 hsa-miR-3692-5p 1 0 0
chr10:102400375|102400541 hsa-miR-4695-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6721-5p 0 1 0
chr10:102400375|102400541 hsa-miR-3189-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6829-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6805-5p 0 1 0
chr10:102400375|102400541 hsa-miR-4633-5p 1 1 0
chr10:102400375|102400541 hsa-miR-6772-3p 0 1 0
chr10:102400375|102400541 hsa-miR-1908-5p 0 1 0
chr10:102400375|102400541 hsa-miR-6824-5p 1 0 0
chr10:102400375|102400541 hsa-miR-7112-5p 0 1 0
chr10:102400375|102400541 hsa-miR-6889-3p 0 1 0
chr10:102400375|102400541 hsa-miR-6883-3p 0 1 0
chr10:102400375|102400541 hsa-miR-3144-5p 0 1 0
chr10:102400375|102400541 hsa-miR-367-5p 0 1 0
chr10:102400375|102400541 hsa-miR-4763-3p 1 1 0
chr10:102400375|102400541 hsa-miR-6775-5p 0 1 0
chr10:102400375|102400541 hsa-miR-6743-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6752-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6756-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6803-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6751-5p 0 1 0
chr10:102400375|102400541 hsa-miR-10396b-5p 0 1 0
chr10:102400375|102400541 hsa-miR-328-5p 1 1 0
chr10:102400375|102400541 hsa-miR-4745-5p 0 1 0
chr10:102400375|102400541 hsa-miR-4749-5p 0 1 0
chr10:102400375|102400541 hsa-miR-550a-5p 1 0 0
chr10:102400375|102400541 hsa-miR-6893-3p 0 1 0
chr10:102400375|102400541 hsa-miR-10400-3p 1 0 0
chr10:102400375|102400541 hsa-miR-517a-3p 0 1 0
chr10:102400375|102400541 hsa-miR-517b-3p 0 1 0
chr10:102400375|102400541 hsa-miR-517c-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:102400375|102400541
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MQQLGHSRSSTLKQCTQQLRSTSACPQRQMHG
Nucleotide Sequence ATGCAACAGCTGGGGCACAGCAGGAGCTCCACTCTGAAGCAGTGCACGCAGCAGCTCAGGAGCACCAGCGCCTGCCCGCAGCGCCAGATGCATGGCTGA

CircID chr10:102400375|102400541
ORF Type ORF2
Protein Length 54
Nucleotide Length 162
Protein Sequence MVPACPLSQVRWGAHPQSQAYATAGAQQELHSEAVHAAAQEHQRLPAAPDAWLS
Nucleotide Sequence CTGGTCCCCGCCTGCCCCCTTAGTCAGGTGAGATGGGGAGCTCACCCTCAAAGTCAGGCATATGCAACAGCTGGGGCACAGCAGGAGCTCCACTCTGAAGCAGTGCACGCAGCAGCTCAGGAGCACCAGCGCCTGCCCGCAGCGCCAGATGCATGGCTGAGT

CircID chr10:102400375|102400541
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MVLLSCCVHCFRVELLLCPSCCICLTLRVSSPSHLTKGAGGDQG
Nucleotide Sequence CTGGTGCTCCTGAGCTGCTGCGTGCACTGCTTCAGAGTGGAGCTCCTGCTGTGCCCCAGCTGTTGCATATGCCTGACTTTGAGGGTGAGCTCCCCATCTCACCTGACTAAGGGGGCAGGCGGGGACCAGGGA

CircID chr10:102400375|102400541
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MHLALRAGAGAPELLRALLQSGAPAVPQLLHMPDFEGELPISPD
Nucleotide Sequence ATGCATCTGGCGCTGCGGGCAGGCGCTGGTGCTCCTGAGCTGCTGCGTGCACTGCTTCAGAGTGGAGCTCCTGCTGTGCCCCAGCTGTTGCATATGCCTGACTTTGAGGGTGAGCTCCCCATCTCACCTGACTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites