CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102400720|102400997
Strand -
CircType exon
Host Gene ENSG00000077150.16;
Algorism CIRI2;
Sequence AGTGGGGCTGAAGTGGAGGCCACAGAGCGGCAGGGGGGACGAACAGCCTTGCATCTAGCCACAGAGATGGAGGAGCTGGGGTTGGTCACCCATCTGGTCACCAAGGTGGGACTGAGGATTGTGGAAGGAGTGGGGCCAAGGGTGGTGGAGGGGCCAAAGATGGTGAAGGGGGGGGCTGGCCAAGGGGACCATGCTGTGGTGTCAACTCTCGCTGCTCGCACCCCCAGCTCCGGGCCAACGTGAACGCTCGCACCTTTGCGGGAAACACACCCCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102400720|102400997 hsa-miR-18a-5p 0 0 1
chr10:102400720|102400997 hsa-miR-18a-3p 0 0 1
chr10:102400720|102400997 hsa-miR-197-5p 0 0 1
chr10:102400720|102400997 hsa-miR-197-3p 0 0 1
chr10:102400720|102400997 hsa-miR-328-5p 0 0 1
chr10:102400720|102400997 hsa-miR-328-3p 0 0 1
chr10:102400720|102400997 hsa-miR-18b-5p 0 0 1
chr10:102400720|102400997 hsa-miR-18b-3p 0 0 1
chr10:102400720|102400997 hsa-miR-412-5p 0 0 1
chr10:102400720|102400997 hsa-miR-412-3p 0 0 1
chr10:102400720|102400997 hsa-miR-503-5p 0 0 1
chr10:102400720|102400997 hsa-miR-503-3p 0 0 1
chr10:102400720|102400997 hsa-miR-588 0 0 1
chr10:102400720|102400997 hsa-miR-637 0 0 1
chr10:102400720|102400997 hsa-miR-1203 0 0 1
chr10:102400720|102400997 hsa-miR-663b 0 0 1
chr10:102400720|102400997 hsa-miR-1262 0 0 1
chr10:102400720|102400997 hsa-miR-1306-5p 0 0 1
chr10:102400720|102400997 hsa-miR-1306-3p 0 0 1
chr10:102400720|102400997 hsa-miR-1224-3p 1 0 1
chr10:102400720|102400997 hsa-miR-140-3p 0 0 1
chr10:102400720|102400997 hsa-miR-342-5p 0 0 1
chr10:102400720|102400997 hsa-miR-483-3p 1 0 1
chr10:102400720|102400997 hsa-miR-455-3p 0 0 1
chr10:102400720|102400997 hsa-miR-220b 0 0 1
chr10:102400720|102400997 hsa-miR-1260 0 0 1
chr10:102400720|102400997 hsa-miR-1280 0 0 1
chr10:102400720|102400997 hsa-miR-9 0 0 1
chr10:102400720|102400997 hsa-miR-514 0 0 1
chr10:102400720|102400997 hsa-miR-219-1-3p 0 0 1
chr10:102400720|102400997 hsa-miR-326 1 0 0
chr10:102400720|102400997 hsa-miR-133b 1 0 0
chr10:102400720|102400997 hsa-miR-346 1 0 0
chr10:102400720|102400997 hsa-miR-596 1 0 0
chr10:102400720|102400997 hsa-miR-647 1 0 0
chr10:102400720|102400997 hsa-miR-1470 1 0 0
chr10:102400720|102400997 hsa-miR-1825 1 0 0
chr10:102400720|102400997 hsa-miR-1913 1 0 0
chr10:102400720|102400997 hsa-miR-1260b 1 0 0
chr10:102400720|102400997 hsa-miR-4313 1 0 0
chr10:102400720|102400997 hsa-miR-4323 1 0 0
chr10:102400720|102400997 hsa-miR-4258 1 0 0
chr10:102400720|102400997 hsa-miR-4286 1 0 0
chr10:102400720|102400997 hsa-miR-4292 1 0 0
chr10:102400720|102400997 hsa-miR-3943 1 0 0
chr10:102400720|102400997 hsa-miR-3972 1 0 0
chr10:102400720|102400997 hsa-miR-4706 1 0 0
chr10:102400720|102400997 hsa-miR-4780 1 0 0
chr10:102400720|102400997 hsa-miR-6084 1 0 0
chr10:102400720|102400997 hsa-miR-7974 1 0 0
chr10:102400720|102400997 hsa-miR-6749-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6836-3p 1 0 0
chr10:102400720|102400997 hsa-miR-212-5p 1 0 0
chr10:102400720|102400997 hsa-miR-149-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6720-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6892-3p 1 0 0
chr10:102400720|102400997 hsa-miR-210-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6881-3p 1 0 0
chr10:102400720|102400997 hsa-miR-296-5p 1 0 0
chr10:102400720|102400997 hsa-miR-874-5p 1 0 0
chr10:102400720|102400997 hsa-miR-3189-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6845-3p 1 0 0
chr10:102400720|102400997 hsa-miR-877-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6858-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4713-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4436b-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6884-3p 1 0 0
chr10:102400720|102400997 hsa-miR-939-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4763-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4707-3p 1 0 0
chr10:102400720|102400997 hsa-miR-1908-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6894-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6803-3p 1 0 0
chr10:102400720|102400997 hsa-miR-7113-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6878-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4787-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4667-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6736-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4640-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6769a-3p 1 0 0
chr10:102400720|102400997 hsa-miR-3190-5p 1 0 0
chr10:102400720|102400997 hsa-miR-211-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6743-3p 1 0 0
chr10:102400720|102400997 hsa-miR-1226-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4687-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6813-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4758-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6887-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6871-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6782-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6872-3p 1 0 0
chr10:102400720|102400997 hsa-miR-7848-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6865-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6886-3p 1 0 0
chr10:102400720|102400997 hsa-miR-5088-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4749-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4649-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6777-3p 1 0 0
chr10:102400720|102400997 hsa-miR-331-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6851-3p 1 0 0
chr10:102400720|102400997 hsa-miR-3620-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4433a-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4433b-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6734-3p 1 0 0
chr10:102400720|102400997 hsa-miR-1249-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6729-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6759-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6780b-3p 1 0 0
chr10:102400720|102400997 hsa-miR-3162-3p 1 0 0
chr10:102400720|102400997 hsa-miR-133a-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4764-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4763-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6752-5p 1 0 0
chr10:102400720|102400997 hsa-miR-7110-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6722-3p 1 0 0
chr10:102400720|102400997 hsa-miR-3127-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4685-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6754-3p 1 0 0
chr10:102400720|102400997 hsa-miR-3620-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4745-3p 1 0 0
chr10:102400720|102400997 hsa-miR-675-5p 1 0 0
chr10:102400720|102400997 hsa-miR-4665-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6724-5p 1 0 0
chr10:102400720|102400997 hsa-miR-9851-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6756-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6792-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6801-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6805-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6810-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6829-3p 1 0 0
chr10:102400720|102400997 hsa-miR-10392-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6511b-3p 1 0 0
chr10:102400720|102400997 hsa-miR-7114-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4701-5p 1 0 0
chr10:102400720|102400997 hsa-miR-6744-3p 1 0 0
chr10:102400720|102400997 hsa-miR-6848-3p 1 0 0
chr10:102400720|102400997 hsa-miR-4690-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:102400720|102400997
ORF Type ORF1
Protein Length 64
Nucleotide Length 195
Protein Sequence MHLATEMEELGLVTHLVTKVGLRIVEGVGPRVVEGPKMVKGGAGQGDHAVVSTLAARTPSSGPT
Nucleotide Sequence TTGCATCTAGCCACAGAGATGGAGGAGCTGGGGTTGGTCACCCATCTGGTCACCAAGGTGGGACTGAGGATTGTGGAAGGAGTGGGGCCAAGGGTGGTGGAGGGGCCAAAGATGGTGAAGGGGGGGGCTGGCCAAGGGGACCATGCTGTGGTGTCAACTCTCGCTGCTCGCACCCCCAGCTCCGGGCCAACGTGA
CircID chr10:102400720|102400997
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MAKGTMLWCQLSLLAPPAPGQRERSHLCGKHTPA
Nucleotide Sequence CTGGCCAAGGGGACCATGCTGTGGTGTCAACTCTCGCTGCTCGCACCCCCAGCTCCGGGCCAACGTGAACGCTCGCACCTTTGCGGGAAACACACCCCTGCA
CircID chr10:102400720|102400997
ORF Type ORF3
Protein Length 75
Nucleotide Length 225
Protein Sequence MGVRAARVDTTAWSPWPAPPFTIFGPSTTLGPTPSTILSPTLVTRWVTNPSSSISVARCKAVRPPCRSVASTSAP
Nucleotide Sequence CTGGGGGTGCGAGCAGCGAGAGTTGACACCACAGCATGGTCCCCTTGGCCAGCCCCCCCCTTCACCATCTTTGGCCCCTCCACCACCCTTGGCCCCACTCCTTCCACAATCCTCAGTCCCACCTTGGTGACCAGATGGGTGACCAACCCCAGCTCCTCCATCTCTGTGGCTAGATGCAAGGCTGTTCGTCCCCCCTGCCGCTCTGTGGCCTCCACTTCAGCCCCA
CircID chr10:102400720|102400997
ORF Type ORF4
Protein Length 46
Nucleotide Length 141
Protein Sequence MARSWGCEQRELTPQHGPLGQPPPSPSLAPPPPLAPLLPQSSVPPW
Nucleotide Sequence TTGGCCCGGAGCTGGGGGTGCGAGCAGCGAGAGTTGACACCACAGCATGGTCCCCTTGGCCAGCCCCCCCCTTCACCATCTTTGGCCCCTCCACCACCCTTGGCCCCACTCCTTCCACAATCCTCAGTCCCACCTTGGTGA
CircID chr10:102400720|102400997
ORF Type ORF5
Protein Length 45
Nucleotide Length 138
Protein Sequence MVPLASPPLHHLWPLHHPWPHSFHNPQSHLGDQMGDQPQLLHLCG
Nucleotide Sequence ATGGTCCCCTTGGCCAGCCCCCCCCTTCACCATCTTTGGCCCCTCCACCACCCTTGGCCCCACTCCTTCCACAATCCTCAGTCCCACCTTGGTGACCAGATGGGTGACCAACCCCAGCTCCTCCATCTCTGTGGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab