CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102401019|102401249
Strand -
CircType exon
Host Gene ENSG00000077150.16;
Algorism CIRI2;
Sequence CCGACCCTCACCCGCCTCCTTCTGAAGGCTGGTCAGTCTCACCCTCAGGGGCACTTGAACAGGGTGGGGGGAAGGGAGAGAGGTGCCTCCCAGTCCCCCGACTTTGCAGTCCTTAATGTAGGCCCCCACCATACCGCCCCATGACGGCCTCCCTCTCCCAGGTGCTGACATCCATGCTGAAAACGAGGAGCCCCTGTGCCCACTGCCTTCACCCCCTACCTCTGATAGCGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102401019|102401249 hsa-let-7b-5p 0 0 1
chr10:102401019|102401249 hsa-let-7b-3p 0 0 1
chr10:102401019|102401249 hsa-let-7c-5p 0 0 1
chr10:102401019|102401249 hsa-let-7c-3p 0 0 1
chr10:102401019|102401249 hsa-let-7d-5p 0 0 1
chr10:102401019|102401249 hsa-let-7d-3p 0 0 1
chr10:102401019|102401249 hsa-let-7e-5p 0 0 1
chr10:102401019|102401249 hsa-let-7e-3p 0 0 1
chr10:102401019|102401249 hsa-miR-26b-5p 0 0 1
chr10:102401019|102401249 hsa-miR-26b-3p 0 0 1
chr10:102401019|102401249 hsa-miR-98-5p 0 0 1
chr10:102401019|102401249 hsa-miR-98-3p 0 0 1
chr10:102401019|102401249 hsa-miR-10a-5p 0 0 1
chr10:102401019|102401249 hsa-miR-10a-3p 0 0 1
chr10:102401019|102401249 hsa-miR-10b-5p 0 0 1
chr10:102401019|102401249 hsa-miR-10b-3p 0 0 1
chr10:102401019|102401249 hsa-miR-34a-5p 0 0 1
chr10:102401019|102401249 hsa-miR-34a-3p 0 0 1
chr10:102401019|102401249 hsa-let-7g-5p 0 0 1
chr10:102401019|102401249 hsa-let-7g-3p 0 0 1
chr10:102401019|102401249 hsa-let-7i-5p 0 0 1
chr10:102401019|102401249 hsa-let-7i-3p 0 0 1
chr10:102401019|102401249 hsa-miR-449a 0 0 1
chr10:102401019|102401249 hsa-miR-527 0 0 1
chr10:102401019|102401249 hsa-miR-650 0 1 1
chr10:102401019|102401249 hsa-miR-449b-5p 0 0 1
chr10:102401019|102401249 hsa-miR-449b-3p 0 0 1
chr10:102401019|102401249 hsa-miR-541-5p 0 0 1
chr10:102401019|102401249 hsa-miR-541-3p 0 0 1
chr10:102401019|102401249 hsa-miR-1297 0 0 1
chr10:102401019|102401249 hsa-miR-1288-5p 0 0 1
chr10:102401019|102401249 hsa-miR-1288-3p 0 0 1
chr10:102401019|102401249 hsa-miR-1321 0 0 1
chr10:102401019|102401249 hsa-miR-361-5p 0 0 1
chr10:102401019|102401249 hsa-miR-654-5p 0 0 1
chr10:102401019|102401249 hsa-miR-490-5p 0 1 1
chr10:102401019|102401249 hsa-miR-125a-5p 0 0 1
chr10:102401019|102401249 hsa-miR-34c-5p 0 0 1
chr10:102401019|102401249 hsa-miR-518a-5p 0 0 1
chr10:102401019|102401249 hsa-miR-886-5p 0 0 1
chr10:102401019|102401249 hsa-miR-125b 0 0 1
chr10:102401019|102401249 hsa-miR-1274b 0 0 1
chr10:102401019|102401249 hsa-miR-220c 0 0 1
chr10:102401019|102401249 hsa-miR-1308 0 0 1
chr10:102401019|102401249 hsa-miR-26a 0 0 1
chr10:102401019|102401249 hsa-miR-323-3p 0 0 1
chr10:102401019|102401249 hsa-let-7a 0 0 1
chr10:102401019|102401249 hsa-let-7f 0 0 1
chr10:102401019|102401249 hsa-miR-886-3p 0 0 1
chr10:102401019|102401249 hsa-miR-608 1 1 0
chr10:102401019|102401249 hsa-miR-637 1 0 0
chr10:102401019|102401249 hsa-miR-933 1 0 0
chr10:102401019|102401249 hsa-miR-1275 1 0 0
chr10:102401019|102401249 hsa-miR-3132 1 0 0
chr10:102401019|102401249 hsa-miR-3196 1 0 0
chr10:102401019|102401249 hsa-miR-4257 1 1 0
chr10:102401019|102401249 hsa-miR-4268 0 1 0
chr10:102401019|102401249 hsa-miR-3612 0 1 0
chr10:102401019|102401249 hsa-miR-3936 1 0 0
chr10:102401019|102401249 hsa-miR-4440 1 0 0
chr10:102401019|102401249 hsa-miR-4443 1 0 0
chr10:102401019|102401249 hsa-miR-4458 1 1 0
chr10:102401019|102401249 hsa-miR-4466 1 0 0
chr10:102401019|102401249 hsa-miR-4488 1 0 0
chr10:102401019|102401249 hsa-miR-4538 1 0 0
chr10:102401019|102401249 hsa-miR-4651 1 1 0
chr10:102401019|102401249 hsa-miR-4688 1 0 0
chr10:102401019|102401249 hsa-miR-4710 1 1 0
chr10:102401019|102401249 hsa-miR-4739 1 1 0
chr10:102401019|102401249 hsa-miR-5572 1 0 0
chr10:102401019|102401249 hsa-miR-6085 1 0 0
chr10:102401019|102401249 hsa-miR-6086 1 0 0
chr10:102401019|102401249 hsa-miR-6127 1 1 0
chr10:102401019|102401249 hsa-miR-6133 1 1 0
chr10:102401019|102401249 hsa-miR-8052 1 1 0
chr10:102401019|102401249 hsa-miR-8073 1 0 0
chr10:102401019|102401249 hsa-miR-8085 1 1 0
chr10:102401019|102401249 hsa-miR-9899 1 0 0
chr10:102401019|102401249 hsa-miR-12114 1 0 0
chr10:102401019|102401249 hsa-miR-12118 0 1 0
chr10:102401019|102401249 hsa-miR-12127 1 0 0
chr10:102401019|102401249 hsa-miR-150-3p 1 0 0
chr10:102401019|102401249 hsa-miR-4731-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6747-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6765-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7106-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6825-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6799-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6728-5p 1 0 0
chr10:102401019|102401249 hsa-miR-3622a-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7851-3p 1 1 0
chr10:102401019|102401249 hsa-miR-6089 1 1 0
chr10:102401019|102401249 hsa-miR-3192-5p 0 1 0
chr10:102401019|102401249 hsa-miR-6880-5p 1 1 0
chr10:102401019|102401249 hsa-miR-7847-3p 1 0 0
chr10:102401019|102401249 hsa-miR-4695-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6744-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6890-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6721-5p 1 0 0
chr10:102401019|102401249 hsa-miR-197-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6873-3p 0 1 0
chr10:102401019|102401249 hsa-miR-7110-3p 0 1 0
chr10:102401019|102401249 hsa-miR-3180-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6748-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6772-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6796-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6829-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6732-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6805-5p 1 0 0
chr10:102401019|102401249 hsa-miR-23a-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6798-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6881-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6782-5p 1 0 0
chr10:102401019|102401249 hsa-miR-3194-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6810-5p 1 0 0
chr10:102401019|102401249 hsa-miR-30b-3p 0 1 0
chr10:102401019|102401249 hsa-miR-5008-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6786-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6835-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1226-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1229-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6784-5p 1 0 0
chr10:102401019|102401249 hsa-miR-30c-2-3p 0 1 0
chr10:102401019|102401249 hsa-miR-3679-3p 0 1 0
chr10:102401019|102401249 hsa-miR-3677-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6847-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7111-3p 0 1 0
chr10:102401019|102401249 hsa-miR-4787-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1266-3p 1 1 0
chr10:102401019|102401249 hsa-miR-149-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6717-5p 1 0 0
chr10:102401019|102401249 hsa-miR-202-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6824-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6789-5p 1 0 0
chr10:102401019|102401249 hsa-miR-3162-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6802-5p 1 0 0
chr10:102401019|102401249 hsa-miR-30a-3p 1 1 0
chr10:102401019|102401249 hsa-miR-1225-5p 1 0 0
chr10:102401019|102401249 hsa-miR-4652-5p 0 1 0
chr10:102401019|102401249 hsa-miR-873-3p 0 1 0
chr10:102401019|102401249 hsa-miR-6867-3p 0 1 0
chr10:102401019|102401249 hsa-miR-4750-5p 1 0 0
chr10:102401019|102401249 hsa-miR-3614-3p 0 1 0
chr10:102401019|102401249 hsa-miR-584-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6734-3p 0 1 0
chr10:102401019|102401249 hsa-miR-371b-3p 0 1 0
chr10:102401019|102401249 hsa-miR-3680-3p 1 0 0
chr10:102401019|102401249 hsa-miR-1207-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1233-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1273h-5p 0 1 0
chr10:102401019|102401249 hsa-miR-4763-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6769b-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6778-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6787-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6812-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6816-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6870-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1343-5p 1 0 0
chr10:102401019|102401249 hsa-miR-5001-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6737-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6743-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6752-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6754-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6756-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6803-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6813-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6819-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6842-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6851-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7107-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7110-5p 1 1 0
chr10:102401019|102401249 hsa-miR-11181-3p 1 0 0
chr10:102401019|102401249 hsa-miR-1249-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6722-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6751-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6808-5p 1 0 0
chr10:102401019|102401249 hsa-miR-7111-5p 1 0 0
chr10:102401019|102401249 hsa-miR-4685-3p 0 1 0
chr10:102401019|102401249 hsa-miR-3620-5p 1 0 0
chr10:102401019|102401249 hsa-miR-4728-5p 1 1 0
chr10:102401019|102401249 hsa-miR-5189-5p 1 0 0
chr10:102401019|102401249 hsa-miR-5196-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6780b-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1237-5p 1 0 0
chr10:102401019|102401249 hsa-miR-1909-3p 1 0 0
chr10:102401019|102401249 hsa-miR-328-5p 1 0 0
chr10:102401019|102401249 hsa-miR-449c-5p 0 1 0
chr10:102401019|102401249 hsa-miR-4632-5p 1 0 0
chr10:102401019|102401249 hsa-miR-4649-5p 1 0 0
chr10:102401019|102401249 hsa-miR-4725-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6729-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6735-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6738-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6794-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6846-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6848-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6883-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6831-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6511b-5p 1 0 0
chr10:102401019|102401249 hsa-miR-30c-1-3p 0 1 0
chr10:102401019|102401249 hsa-miR-6731-5p 1 1 0
chr10:102401019|102401249 hsa-miR-6891-5p 0 1 0
chr10:102401019|102401249 hsa-miR-4472 1 0 0
chr10:102401019|102401249 hsa-miR-4716-3p 1 0 0
chr10:102401019|102401249 hsa-miR-6785-5p 1 0 0
chr10:102401019|102401249 hsa-miR-6791-5p 0 1 0
chr10:102401019|102401249 hsa-miR-10400-3p 1 0 0
chr10:102401019|102401249 hsa-miR-4723-3p 0 1 0
chr10:102401019|102401249 hsa-miR-6769b-3p 0 1 0
chr10:102401019|102401249 hsa-miR-4756-5p 0 1 0
chr10:102401019|102401249 hsa-miR-6864-3p 0 1 0
chr10:102401019|102401249 hsa-miR-7157-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:102401019|102401249
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MKAGQSHPQGHLNRVGGRERGASQSPDFAVLNVGPHHTAP
Nucleotide Sequence CTGAAGGCTGGTCAGTCTCACCCTCAGGGGCACTTGAACAGGGTGGGGGGAAGGGAGAGAGGTGCCTCCCAGTCCCCCGACTTTGCAGTCCTTAATGTAGGCCCCCACCATACCGCCCCATGA
CircID chr10:102401019|102401249
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MTASLSQVLTSMLKTRSPCAHCLHPLPLIA
Nucleotide Sequence ATGACGGCCTCCCTCTCCCAGGTGCTGACATCCATGCTGAAAACGAGGAGCCCCTGTGCCCACTGCCTTCACCCCCTACCTCTGATAGCG
CircID chr10:102401019|102401249
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MSAPGRGRPSWGGMVGAYIKDCKVGGLGGTSLPSPHPVQVPLRVRLTSLQKEAGEGR
Nucleotide Sequence ATGTCAGCACCTGGGAGAGGGAGGCCGTCATGGGGCGGTATGGTGGGGGCCTACATTAAGGACTGCAAAGTCGGGGGACTGGGAGGCACCTCTCTCCCTTCCCCCCACCCTGTTCAAGTGCCCCTGAGGGTGAGACTGACCAGCCTTCAGAAGGAGGCGGGTGAGGGTCGG
CircID chr10:102401019|102401249
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MGEGGRHGAVWWGPTLRTAKSGDWEAPLSLPPTLFKCP
Nucleotide Sequence CTGGGAGAGGGAGGCCGTCATGGGGCGGTATGGTGGGGGCCTACATTAAGGACTGCAAAGTCGGGGGACTGGGAGGCACCTCTCTCCCTTCCCCCCACCCTGTTCAAGTGCCCCTGA
CircID chr10:102401019|102401249
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MQSRGTGRHLSPFPPPCSSAPEGETDQPSEGGG
Nucleotide Sequence CTGCAAAGTCGGGGGACTGGGAGGCACCTCTCTCCCTTCCCCCCACCCTGTTCAAGTGCCCCTGAGGGTGAGACTGACCAGCCTTCAGAAGGAGGCGGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab