CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102475806|102476018
Strand -
CircType exon
Host Gene ENSG00000138111.13;
Algorism CIRI2;
Sequence AGGCCCCGACGCTCCGCCAGGGCTGCTTCTACCTGCTGGTGCTGGTGCCCATCACCTGTGCTCTGCTGCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGTGTGAGAGCTGTGGCAAGGTCACCCCACTGAGGATGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102475806|102476018 hsa-miR-29a-5p 0 0 1
chr10:102475806|102476018 hsa-miR-29a-3p 0 0 1
chr10:102475806|102476018 hsa-miR-107 0 0 1
chr10:102475806|102476018 hsa-miR-214-5p 0 0 1
chr10:102475806|102476018 hsa-miR-214-3p 0 0 1
chr10:102475806|102476018 hsa-miR-150-5p 0 0 1
chr10:102475806|102476018 hsa-miR-150-3p 0 0 1
chr10:102475806|102476018 hsa-miR-29c-5p 0 0 1
chr10:102475806|102476018 hsa-miR-29c-3p 0 0 1
chr10:102475806|102476018 hsa-miR-552-5p 0 0 1
chr10:102475806|102476018 hsa-miR-552-3p 0 0 1
chr10:102475806|102476018 hsa-miR-558 0 0 1
chr10:102475806|102476018 hsa-miR-591 0 0 1
chr10:102475806|102476018 hsa-miR-608 1 1 1
chr10:102475806|102476018 hsa-miR-634 0 1 1
chr10:102475806|102476018 hsa-miR-922 0 1 1
chr10:102475806|102476018 hsa-miR-1226-5p 0 0 1
chr10:102475806|102476018 hsa-miR-1226-3p 0 0 1
chr10:102475806|102476018 hsa-miR-1228-5p 0 0 1
chr10:102475806|102476018 hsa-miR-1228-3p 0 0 1
chr10:102475806|102476018 hsa-miR-125a-3p 0 1 1
chr10:102475806|102476018 hsa-miR-532-3p 0 0 1
chr10:102475806|102476018 hsa-miR-1184 0 0 1
chr10:102475806|102476018 hsa-miR-342-5p 0 0 1
chr10:102475806|102476018 hsa-miR-342-3p 0 0 1
chr10:102475806|102476018 hsa-miR-542-3p 0 0 1
chr10:102475806|102476018 hsa-miR-103 0 0 1
chr10:102475806|102476018 hsa-miR-220a 0 0 1
chr10:102475806|102476018 hsa-miR-29b 0 0 1
chr10:102475806|102476018 hsa-miR-2861 1 0 0
chr10:102475806|102476018 hsa-miR-548v 1 0 0
chr10:102475806|102476018 hsa-miR-4530 0 1 0
chr10:102475806|102476018 hsa-miR-4539 1 0 0
chr10:102475806|102476018 hsa-miR-4660 1 1 0
chr10:102475806|102476018 hsa-miR-4730 0 1 0
chr10:102475806|102476018 hsa-miR-4739 1 0 0
chr10:102475806|102476018 hsa-miR-6081 1 0 0
chr10:102475806|102476018 hsa-miR-9899 1 0 0
chr10:102475806|102476018 hsa-miR-12121 1 0 0
chr10:102475806|102476018 hsa-miR-671-5p 1 0 0
chr10:102475806|102476018 hsa-miR-25-5p 0 1 0
chr10:102475806|102476018 hsa-miR-3663-3p 1 0 0
chr10:102475806|102476018 hsa-miR-593-5p 1 1 0
chr10:102475806|102476018 hsa-miR-770-5p 1 0 0
chr10:102475806|102476018 hsa-miR-5589-5p 1 0 0
chr10:102475806|102476018 hsa-miR-6742-5p 1 1 0
chr10:102475806|102476018 hsa-miR-6735-3p 0 1 0
chr10:102475806|102476018 hsa-miR-6740-5p 0 1 0
chr10:102475806|102476018 hsa-miR-3186-5p 0 1 0
chr10:102475806|102476018 hsa-miR-4640-5p 1 1 0
chr10:102475806|102476018 hsa-miR-4650-3p 0 1 0
chr10:102475806|102476018 hsa-miR-194-3p 0 1 0
chr10:102475806|102476018 hsa-miR-3065-3p 0 1 0
chr10:102475806|102476018 hsa-miR-1225-5p 1 0 0
chr10:102475806|102476018 hsa-miR-2116-3p 0 1 0
chr10:102475806|102476018 hsa-miR-4763-3p 0 1 0
chr10:102475806|102476018 hsa-miR-6737-5p 0 1 0
chr10:102475806|102476018 hsa-miR-3620-5p 1 0 0
chr10:102475806|102476018 hsa-miR-6836-5p 1 0 0
chr10:102475806|102476018 hsa-miR-10396b-5p 0 1 0
chr10:102475806|102476018 hsa-miR-4685-5p 1 0 0
chr10:102475806|102476018 hsa-miR-6885-5p 1 0 0
chr10:102475806|102476018 hsa-miR-6724-5p 1 0 0
chr10:102475806|102476018 hsa-miR-10400-3p 1 0 0
chr10:102475806|102476018 hsa-miR-6837-5p 1 0 0
chr10:102475806|102476018 hsa-miR-9851-3p 1 1 0
chr10:102475806|102476018 hsa-miR-3619-5p 0 1 0
chr10:102475806|102476018 hsa-miR-10397-5p 0 1 0
chr10:102475806|102476018 hsa-miR-6811-5p 0 1 0
chr10:102475806|102476018 hsa-miR-3064-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:102475806|102476018
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MGDACTWSRPSARTCHRPKPWMLRWCESCGKVTPLRML
Nucleotide Sequence ATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGTGTGAGAGCTGTGGCAAGGTCACCCCACTGAGGATGCTG
CircID chr10:102475806|102476018
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MLLPAGAGAHHLCSAAALHLVPVHAAWETPAHGQGPAPEPVTGPNPGC
Nucleotide Sequence CTGCTTCTACCTGCTGGTGCTGGTGCCCATCACCTGTGCTCTGCTGCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAA
CircID chr10:102475806|102476018
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MLVLVPITCALLQLFTWSQFTLHGRRLHMVKAQRQNLSQAQTLDVKMV
Nucleotide Sequence CTGCTGGTGCTGGTGCCCATCACCTGTGCTCTGCTGCAGCTCTTCACCTGGTCCCAGTTCACGCTGCATGGGAGACGCCTGCACATGGTCAAGGCCCAGCGCCAGAACCTGTCACAGGCCCAAACCCTGGATGTTAAGATGGTGTGA
CircID chr10:102475806|102476018
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MALGLDHVQASPMQRELGPGEELQQSTGDGHQHQQVEAALAERRG
Nucleotide Sequence CTGGCGCTGGGCCTTGACCATGTGCAGGCGTCTCCCATGCAGCGTGAACTGGGACCAGGTGAAGAGCTGCAGCAGAGCACAGGTGATGGGCACCAGCACCAGCAGGTAGAAGCAGCCCTGGCGGAGCGTCGGGGC
CircID chr10:102475806|102476018
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MTMCRRLPCSVNWDQVKSCSRAQVMGTSTSR
Nucleotide Sequence TTGACCATGTGCAGGCGTCTCCCATGCAGCGTGAACTGGGACCAGGTGAAGAGCTGCAGCAGAGCACAGGTGATGGGCACCAGCACCAGCAGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab