CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102480773|102481152
Strand -
CircType exon
Host Gene ENSG00000138107.10;
Algorism CIRI2;
Sequence ACAGGCAGTTCCTCGCAAACACTCCGACTCAAGAAAGCGAGTTTTAAAGTGGAGTTAACTTCAGAGAGAGGTGAAGATGATGTCCCGACATTAGAAGGTTTTTCTGTGGATGGATCGGGCACCGTCTTCCTCATATTCCTTTTTGGAGACCCACATCTTCTTAAAGGTGTCCAGGGAGGCAAGGATGGAGCCCCCAATCCACGTGGAATACAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102480773|102481152 hsa-miR-122-5p 0 0 1
chr10:102480773|102481152 hsa-miR-122-3p 0 0 1
chr10:102480773|102481152 hsa-miR-412-5p 0 0 1
chr10:102480773|102481152 hsa-miR-412-3p 0 0 1
chr10:102480773|102481152 hsa-miR-526b-5p 0 0 1
chr10:102480773|102481152 hsa-miR-526b-3p 0 0 1
chr10:102480773|102481152 hsa-miR-578 0 0 1
chr10:102480773|102481152 hsa-miR-627-5p 0 0 1
chr10:102480773|102481152 hsa-miR-627-3p 0 0 1
chr10:102480773|102481152 hsa-miR-630 0 0 1
chr10:102480773|102481152 hsa-miR-548e-5p 0 0 1
chr10:102480773|102481152 hsa-miR-548e-3p 0 0 1
chr10:102480773|102481152 hsa-miR-1275 0 0 1
chr10:102480773|102481152 hsa-miR-299-3p 0 0 1
chr10:102480773|102481152 hsa-miR-193a-5p 0 0 1
chr10:102480773|102481152 hsa-miR-502-5p 0 1 1
chr10:102480773|102481152 hsa-miR-576-3p 0 0 1
chr10:102480773|102481152 hsa-miR-576-5p 0 0 1
chr10:102480773|102481152 hsa-miR-362-5p 0 0 1
chr10:102480773|102481152 hsa-miR-515-5p 0 0 1
chr10:102480773|102481152 hsa-miR-548a-3p 0 0 1
chr10:102480773|102481152 hsa-miR-548d-3p 0 0 1
chr10:102480773|102481152 hsa-miR-7 0 0 1
chr10:102480773|102481152 hsa-miR-548f 0 0 1
chr10:102480773|102481152 hsa-miR-450a 0 0 1
chr10:102480773|102481152 hsa-miR-206 0 1 0
chr10:102480773|102481152 hsa-miR-3183 0 1 0
chr10:102480773|102481152 hsa-miR-3659 0 1 0
chr10:102480773|102481152 hsa-miR-3915 0 1 0
chr10:102480773|102481152 hsa-miR-4737 0 1 0
chr10:102480773|102481152 hsa-miR-8081 0 1 0
chr10:102480773|102481152 hsa-miR-6836-3p 0 1 0
chr10:102480773|102481152 hsa-miR-6822-3p 0 1 0
chr10:102480773|102481152 hsa-miR-6759-5p 0 1 0
chr10:102480773|102481152 hsa-miR-6873-3p 0 1 0
chr10:102480773|102481152 hsa-miR-1915-5p 0 1 0
chr10:102480773|102481152 hsa-miR-7113-3p 0 1 0
chr10:102480773|102481152 hsa-miR-4638-3p 0 1 0
chr10:102480773|102481152 hsa-miR-500a-5p 0 1 0
chr10:102480773|102481152 hsa-miR-6778-3p 0 1 0
chr10:102480773|102481152 hsa-miR-7151-5p 0 1 0
chr10:102480773|102481152 hsa-miR-99a-3p 0 1 0
chr10:102480773|102481152 hsa-miR-6754-3p 0 1 0
chr10:102480773|102481152 hsa-miR-4723-3p 0 1 0
chr10:102480773|102481152 hsa-miR-500b-5p 0 1 0
chr10:102480773|102481152 hsa-miR-6859-5p 0 1 0
chr10:102480773|102481152 hsa-miR-4315 0 1 0
chr10:102480773|102481152 hsa-miR-519e-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:102480773|102481152
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MWMDRAPSSSYSFLETHIFLKVSREARMEPPIHVEYS
Nucleotide Sequence CTGTGGATGGATCGGGCACCGTCTTCCTCATATTCCTTTTTGGAGACCCACATCTTCTTAAAGGTGTCCAGGGAGGCAAGGATGGAGCCCCCAATCCACGTGGAATACAGT
CircID chr10:102480773|102481152
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence LYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF
Nucleotide Sequence CTGTATTCCACGTGGATTGGGGGCTCCATCCTTGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCCAAAAAGGAATATGAGGAAGACGGTGCCCGATCCATCCACAGAAAAACCTTCTAA
CircID chr10:102480773|102481152
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MGAPSLPPWTPLRRCGSPKRNMRKTVPDPSTEKPSNVGTSSSPLSEVNSTLKLAFLSRSVCEELP
Nucleotide Sequence TTGGGGGCTCCATCCTTGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCCAAAAAGGAATATGAGGAAGACGGTGCCCGATCCATCCACAGAAAAACCTTCTAATGTCGGGACATCATCTTCACCTCTCTCTGAAGTTAACTCCACTTTAAAACTCGCTTTCTTGAGTCGGAGTGTTTGCGAGGAACTGCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab