CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102644984|102645123
Strand -
CircType exon
Host Gene ENSG00000171206.12;
Algorism CIRI2;
Sequence CTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCCTGGTGGAGGCGGACGACGTGCGGGCCTGGAGCTGCCCGCAGCACAACGCCTACCGCCTCTACCACTGCGAGGCCGAGCAGGTGGCCGTGTGCCAGTACTGCTGCTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102644984|102645123 hsa-miR-15a-5p 0 0 1
chr10:102644984|102645123 hsa-miR-15a-3p 0 0 1
chr10:102644984|102645123 hsa-miR-15b-5p 0 0 1
chr10:102644984|102645123 hsa-miR-15b-3p 0 0 1
chr10:102644984|102645123 hsa-miR-195-5p 0 0 1
chr10:102644984|102645123 hsa-miR-195-3p 0 0 1
chr10:102644984|102645123 hsa-miR-379-5p 0 0 1
chr10:102644984|102645123 hsa-miR-379-3p 0 0 1
chr10:102644984|102645123 hsa-miR-424-5p 0 0 1
chr10:102644984|102645123 hsa-miR-424-3p 0 0 1
chr10:102644984|102645123 hsa-miR-193b-5p 0 0 1
chr10:102644984|102645123 hsa-miR-193b-3p 0 0 1
chr10:102644984|102645123 hsa-miR-497-5p 0 0 1
chr10:102644984|102645123 hsa-miR-497-3p 0 0 1
chr10:102644984|102645123 hsa-miR-503-5p 0 0 1
chr10:102644984|102645123 hsa-miR-503-3p 0 0 1
chr10:102644984|102645123 hsa-miR-646 0 0 1
chr10:102644984|102645123 hsa-miR-892b 0 0 1
chr10:102644984|102645123 hsa-miR-665 0 0 1
chr10:102644984|102645123 hsa-miR-1234-3p 0 0 1
chr10:102644984|102645123 hsa-miR-1278 0 1 1
chr10:102644984|102645123 hsa-miR-1281 0 0 1
chr10:102644984|102645123 hsa-miR-1234 0 0 1
chr10:102644984|102645123 hsa-miR-423-3p 0 0 1
chr10:102644984|102645123 hsa-miR-193a-3p 0 0 1
chr10:102644984|102645123 hsa-miR-16 0 0 1
chr10:102644984|102645123 hsa-miR-218 0 0 1
chr10:102644984|102645123 hsa-miR-107 1 0 0
chr10:102644984|102645123 hsa-miR-608 1 0 0
chr10:102644984|102645123 hsa-miR-637 1 0 0
chr10:102644984|102645123 hsa-miR-1293 1 0 0
chr10:102644984|102645123 hsa-miR-3621 1 0 0
chr10:102644984|102645123 hsa-miR-4669 1 1 0
chr10:102644984|102645123 hsa-miR-4686 0 1 0
chr10:102644984|102645123 hsa-miR-4734 1 1 0
chr10:102644984|102645123 hsa-miR-4767 1 1 0
chr10:102644984|102645123 hsa-miR-6081 1 0 0
chr10:102644984|102645123 hsa-miR-6084 0 1 0
chr10:102644984|102645123 hsa-miR-370-3p 1 0 0
chr10:102644984|102645123 hsa-miR-4747-3p 0 1 0
chr10:102644984|102645123 hsa-miR-92a-2-5p 0 1 0
chr10:102644984|102645123 hsa-miR-6799-5p 1 0 0
chr10:102644984|102645123 hsa-miR-6880-5p 1 1 0
chr10:102644984|102645123 hsa-miR-6840-5p 1 0 0
chr10:102644984|102645123 hsa-miR-6829-5p 0 1 0
chr10:102644984|102645123 hsa-miR-1908-3p 1 1 0
chr10:102644984|102645123 hsa-miR-1228-5p 1 0 0
chr10:102644984|102645123 hsa-miR-3648 1 0 0
chr10:102644984|102645123 hsa-miR-4787-5p 1 0 0
chr10:102644984|102645123 hsa-miR-6499-5p 1 0 0
chr10:102644984|102645123 hsa-miR-4750-5p 1 0 0
chr10:102644984|102645123 hsa-miR-2277-5p 1 0 0
chr10:102644984|102645123 hsa-miR-5589-3p 1 1 0
chr10:102644984|102645123 hsa-miR-1233-5p 1 0 0
chr10:102644984|102645123 hsa-miR-1273h-5p 1 0 0
chr10:102644984|102645123 hsa-miR-3085-5p 1 0 0
chr10:102644984|102645123 hsa-miR-1301-5p 0 1 0
chr10:102644984|102645123 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:102644984|102645123
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence LQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCC
Nucleotide Sequence CTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCCTGGTGGAGGCGGACGACGTGCGGGCCTGGAGCTGCCCGCAGCACAACGCCTACCGCCTCTACCACTGCGAGGCCGAGCAGGTGGCCGTGTGCCAGTACTGCTGC

CircID chr10:102644984|102645123
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MELPAAQRLPPLPLRGRAGGRVPVLLL
Nucleotide Sequence CTGGAGCTGCCCGCAGCACAACGCCTACCGCCTCTACCACTGCGAGGCCGAGCAGGTGGCCGTGTGCCAGTACTGCTGCTA

CircID chr10:102644984|102645123
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MCCGQLQARTSSASTRRCPRAVEGCC
Nucleotide Sequence TTGTGCTGCGGGCAGCTCCAGGCCCGCACGTCGTCCGCCTCCACCAGGAGGTGCCCGCGGGCGGTGGAGGGCTGCTGC

CircID chr10:102644984|102645123
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MAHGHLLGLAVVEAVGVVLRAAPGPHVVRLHQEVPAGGGGLLQ
Nucleotide Sequence CTGGCACACGGCCACCTGCTCGGCCTCGCAGTGGTAGAGGCGGTAGGCGTTGTGCTGCGGGCAGCTCCAGGCCCGCACGTCGTCCGCCTCCACCAGGAGGTGCCCGCGGGCGGTGGAGGGCTGCTGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites