CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102657325|102657591
Strand +
CircType exon
Host Gene ENSG00000171206.12;
Algorism CIRI2;
Sequence CTGCCGTCCTGGCCCAGGCCAGCTCCCACTGTCACCTCTGCGTCCAGGAGATTCATAATAAAAAAAAATCAAAAACAAAGCCAAAACCAAAACAAAATCCAAAAGGAAAAGACCTGGGGCAATGGAATGAGGAAGAGGGGAGGCGAGGAAGGTAGAAGGGCAGGTCTCTGGATGCATAACTCCCGAGCCCGGGGGCTGGGGAGGAAGATTCCCCAGCGCCCCGCCGCCTGCGTGGCGTTAGCTCGTCACGTAGTGTTTGGTGGACGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102657325|102657591 hsa-miR-586 0 0 1
chr10:102657325|102657591 hsa-miR-610 0 1 1
chr10:102657325|102657591 hsa-miR-614 0 0 1
chr10:102657325|102657591 hsa-miR-661 0 1 1
chr10:102657325|102657591 hsa-miR-659-5p 0 0 1
chr10:102657325|102657591 hsa-miR-659-3p 0 0 1
chr10:102657325|102657591 hsa-miR-744-5p 0 0 1
chr10:102657325|102657591 hsa-miR-744-3p 0 0 1
chr10:102657325|102657591 hsa-miR-920 0 0 1
chr10:102657325|102657591 hsa-miR-938 0 0 1
chr10:102657325|102657591 hsa-miR-1236-5p 0 0 1
chr10:102657325|102657591 hsa-miR-1236-3p 0 0 1
chr10:102657325|102657591 hsa-miR-1238-5p 0 0 1
chr10:102657325|102657591 hsa-miR-1238-3p 0 0 1
chr10:102657325|102657591 hsa-miR-1290 0 0 1
chr10:102657325|102657591 hsa-miR-1281 1 1 1
chr10:102657325|102657591 hsa-miR-769-5p 0 0 1
chr10:102657325|102657591 hsa-miR-324-5p 0 0 1
chr10:102657325|102657591 hsa-miR-525-5p 1 1 1
chr10:102657325|102657591 hsa-miR-520a-5p 0 1 1
chr10:102657325|102657591 hsa-miR-876-5p 0 0 1
chr10:102657325|102657591 hsa-miR-491-3p 0 1 1
chr10:102657325|102657591 hsa-miR-542-3p 0 0 1
chr10:102657325|102657591 hsa-miR-663 0 0 1
chr10:102657325|102657591 hsa-miR-184 1 0 0
chr10:102657325|102657591 hsa-miR-422a 1 0 0
chr10:102657325|102657591 hsa-miR-596 1 0 0
chr10:102657325|102657591 hsa-miR-663a 0 1 0
chr10:102657325|102657591 hsa-miR-658 1 0 0
chr10:102657325|102657591 hsa-miR-762 1 0 0
chr10:102657325|102657591 hsa-miR-3176 0 1 0
chr10:102657325|102657591 hsa-miR-378c 1 0 0
chr10:102657325|102657591 hsa-miR-4300 0 1 0
chr10:102657325|102657591 hsa-miR-4290 1 0 0
chr10:102657325|102657591 hsa-miR-3665 0 1 0
chr10:102657325|102657591 hsa-miR-3937 0 1 0
chr10:102657325|102657591 hsa-miR-3943 0 1 0
chr10:102657325|102657591 hsa-miR-378e 1 0 0
chr10:102657325|102657591 hsa-miR-378g 0 1 0
chr10:102657325|102657591 hsa-miR-378h 1 0 0
chr10:102657325|102657591 hsa-miR-4462 1 0 0
chr10:102657325|102657591 hsa-miR-4467 0 1 0
chr10:102657325|102657591 hsa-miR-4486 1 0 0
chr10:102657325|102657591 hsa-miR-4487 1 1 0
chr10:102657325|102657591 hsa-miR-4498 1 0 0
chr10:102657325|102657591 hsa-miR-4526 0 1 0
chr10:102657325|102657591 hsa-miR-1587 1 0 0
chr10:102657325|102657591 hsa-miR-3960 0 1 0
chr10:102657325|102657591 hsa-miR-4741 1 0 0
chr10:102657325|102657591 hsa-miR-5193 1 1 0
chr10:102657325|102657591 hsa-miR-6090 1 0 0
chr10:102657325|102657591 hsa-miR-8072 0 1 0
chr10:102657325|102657591 hsa-miR-6749-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6747-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4433a-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6836-3p 1 0 0
chr10:102657325|102657591 hsa-miR-205-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6881-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6799-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6510-5p 1 0 0
chr10:102657325|102657591 hsa-miR-4695-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6744-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6875-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6840-5p 1 1 0
chr10:102657325|102657591 hsa-miR-6741-5p 1 0 0
chr10:102657325|102657591 hsa-miR-1915-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6832-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6845-3p 1 0 0
chr10:102657325|102657591 hsa-miR-877-3p 1 1 0
chr10:102657325|102657591 hsa-miR-4655-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6728-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6786-5p 1 0 0
chr10:102657325|102657591 hsa-miR-4763-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6894-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4640-5p 0 1 0
chr10:102657325|102657591 hsa-miR-6803-3p 1 1 0
chr10:102657325|102657591 hsa-miR-5001-3p 1 0 0
chr10:102657325|102657591 hsa-miR-3667-3p 1 1 0
chr10:102657325|102657591 hsa-miR-3677-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6749-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6847-5p 1 0 0
chr10:102657325|102657591 hsa-miR-7111-3p 1 1 0
chr10:102657325|102657591 hsa-miR-5196-3p 1 0 0
chr10:102657325|102657591 hsa-miR-3690 1 1 0
chr10:102657325|102657591 hsa-miR-6800-5p 1 0 0
chr10:102657325|102657591 hsa-miR-194-3p 0 1 0
chr10:102657325|102657591 hsa-miR-1237-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6887-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4727-3p 0 1 0
chr10:102657325|102657591 hsa-miR-6778-3p 1 0 0
chr10:102657325|102657591 hsa-miR-670-3p 0 1 0
chr10:102657325|102657591 hsa-miR-6741-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6872-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6758-3p 0 1 0
chr10:102657325|102657591 hsa-miR-6826-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6886-3p 1 1 0
chr10:102657325|102657591 hsa-miR-5088-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6738-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6795-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4649-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6880-3p 1 1 0
chr10:102657325|102657591 hsa-miR-3124-3p 1 0 0
chr10:102657325|102657591 hsa-miR-490-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6734-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6812-3p 1 0 0
chr10:102657325|102657591 hsa-miR-1249-3p 1 0 0
chr10:102657325|102657591 hsa-miR-5581-3p 1 0 0
chr10:102657325|102657591 hsa-miR-10400-5p 1 1 0
chr10:102657325|102657591 hsa-miR-1233-5p 1 1 0
chr10:102657325|102657591 hsa-miR-4763-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6778-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6812-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6865-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6726-5p 1 1 0
chr10:102657325|102657591 hsa-miR-6851-5p 1 1 0
chr10:102657325|102657591 hsa-miR-6722-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6779-5p 1 0 0
chr10:102657325|102657591 hsa-miR-3127-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4685-3p 1 0 0
chr10:102657325|102657591 hsa-miR-3620-5p 1 0 0
chr10:102657325|102657591 hsa-miR-5189-5p 1 0 0
chr10:102657325|102657591 hsa-miR-10396b-5p 0 1 0
chr10:102657325|102657591 hsa-miR-6795-5p 1 0 0
chr10:102657325|102657591 hsa-miR-6846-5p 1 1 0
chr10:102657325|102657591 hsa-miR-6848-5p 1 1 0
chr10:102657325|102657591 hsa-miR-6887-5p 1 0 0
chr10:102657325|102657591 hsa-miR-939-5p 1 0 0
chr10:102657325|102657591 hsa-miR-324-3p 1 0 0
chr10:102657325|102657591 hsa-miR-378a-3p 1 0 0
chr10:102657325|102657591 hsa-miR-5591-5p 0 1 0
chr10:102657325|102657591 hsa-miR-6893-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6756-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6792-3p 0 1 0
chr10:102657325|102657591 hsa-miR-10401-3p 1 1 0
chr10:102657325|102657591 hsa-miR-6805-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6829-3p 1 0 0
chr10:102657325|102657591 hsa-miR-3059-5p 1 1 0
chr10:102657325|102657591 hsa-miR-4723-3p 1 0 0
chr10:102657325|102657591 hsa-miR-6891-3p 1 0 0
chr10:102657325|102657591 hsa-miR-4769-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:102657325|102657591
ORF Type ORF1
Protein Length 89
Nucleotide Length 267
Protein Sequence LPSWPRPAPTVTSASRRFIIKKNQKQSQNQNKIQKEKTWGNGMRKRGGEEGRRAGLWMHNSRARGLGRKIPQRPAACVALARHVVFGGR
Nucleotide Sequence CTGCCGTCCTGGCCCAGGCCAGCTCCCACTGTCACCTCTGCGTCCAGGAGATTCATAATAAAAAAAAATCAAAAACAAAGCCAAAACCAAAACAAAATCCAAAAGGAAAAGACCTGGGGCAATGGAATGAGGAAGAGGGGAGGCGAGGAAGGTAGAAGGGCAGGTCTCTGGATGCATAACTCCCGAGCCCGGGGGCTGGGGAGGAAGATTCCCCAGCGCCCCGCCGCCTGCGTGGCGTTAGCTCGTCACGTAGTGTTTGGTGGACGG
CircID chr10:102657325|102657591
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MAQASSHCHLCVQEIHNKKKSKTKPKPKQNPKGKDLGQWNEEEGRRGR
Nucleotide Sequence CTGGCCCAGGCCAGCTCCCACTGTCACCTCTGCGTCCAGGAGATTCATAATAAAAAAAAATCAAAAACAAAGCCAAAACCAAAACAAAATCCAAAAGGAAAAGACCTGGGGCAATGGAATGAGGAAGAGGGGAGGCGAGGAAGGTAG
CircID chr10:102657325|102657591
ORF Type ORF3
Protein Length 72
Nucleotide Length 216
Protein Sequence MGNLPPQPPGSGVMHPETCPSTFLASPLPHSIAPGLFLLDFVLVLALFLIFFYYESPGRRGDSGSWPGPGRQ
Nucleotide Sequence CTGGGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATGCATCCAGAGACCTGCCCTTCTACCTTCCTCGCCTCCCCTCTTCCTCATTCCATTGCCCCAGGTCTTTTCCTTTTGGATTTTGTTTTGGTTTTGGCTTTGTTTTTGATTTTTTTTTATTATGAATCTCCTGGACGCAGAGGTGACAGTGGGAGCTGGCCTGGGCCAGGACGGCAG
CircID chr10:102657325|102657591
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MPFYLPRLPSSSFHCPRSFPFGFCFGFGFVFDFFLL
Nucleotide Sequence CTGCCCTTCTACCTTCCTCGCCTCCCCTCTTCCTCATTCCATTGCCCCAGGTCTTTTCCTTTTGGATTTTGTTTTGGTTTTGGCTTTGTTTTTGATTTTTTTTTATTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab