CircRNA Information

General Information
circRNA Basic Information
CircID chr10:102665195|102665477
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCAGTTCTTGGAACACCCCTCCCTGCATTCTACTTCTGAGATGGAATTCTGTGCCATCTCTTTTTTTTGAGACTAAAGTCTCACTCTTGTCACCCAGGCTGGAGTGCAGTAGTGAGATCTCGGCTCACTGCAACCTCCATCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCTACCACTCCTGGCTAATTTTTGTACTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTAGTCTTGAACTCCCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:102665195|102665477 hsa-miR-183-5p 0 0 1
chr10:102665195|102665477 hsa-miR-183-3p 0 0 1
chr10:102665195|102665477 hsa-miR-217-5p 0 0 1
chr10:102665195|102665477 hsa-miR-217-3p 0 0 1
chr10:102665195|102665477 hsa-miR-510-5p 0 0 1
chr10:102665195|102665477 hsa-miR-510-3p 0 0 1
chr10:102665195|102665477 hsa-miR-575 0 0 1
chr10:102665195|102665477 hsa-miR-596 0 0 1
chr10:102665195|102665477 hsa-miR-609 0 0 1
chr10:102665195|102665477 hsa-miR-661 0 1 1
chr10:102665195|102665477 hsa-miR-766-5p 0 0 1
chr10:102665195|102665477 hsa-miR-766-3p 0 0 1
chr10:102665195|102665477 hsa-miR-665 1 1 1
chr10:102665195|102665477 hsa-miR-940 0 0 1
chr10:102665195|102665477 hsa-miR-548k 0 0 1
chr10:102665195|102665477 hsa-miR-1262 0 0 1
chr10:102665195|102665477 hsa-miR-548n 0 0 1
chr10:102665195|102665477 hsa-miR-1321 0 0 1
chr10:102665195|102665477 hsa-miR-1827 0 1 1
chr10:102665195|102665477 hsa-miR-512-5p 0 0 1
chr10:102665195|102665477 hsa-miR-485-5p 0 1 1
chr10:102665195|102665477 hsa-miR-566 0 0 1
chr10:102665195|102665477 hsa-miR-508-5p 0 1 1
chr10:102665195|102665477 hsa-miR-509-3-5p 0 0 1
chr10:102665195|102665477 hsa-miR-509-5p 0 0 1
chr10:102665195|102665477 hsa-miR-371-5p 0 0 1
chr10:102665195|102665477 hsa-miR-648 1 0 0
chr10:102665195|102665477 hsa-miR-650 1 0 0
chr10:102665195|102665477 hsa-miR-3929 0 1 0
chr10:102665195|102665477 hsa-miR-3937 1 0 0
chr10:102665195|102665477 hsa-miR-3973 0 1 0
chr10:102665195|102665477 hsa-miR-4656 1 1 0
chr10:102665195|102665477 hsa-miR-4706 1 0 0
chr10:102665195|102665477 hsa-miR-5684 0 1 0
chr10:102665195|102665477 hsa-miR-5787 1 0 0
chr10:102665195|102665477 hsa-miR-6086 0 1 0
chr10:102665195|102665477 hsa-miR-6132 1 0 0
chr10:102665195|102665477 hsa-miR-7703 0 1 0
chr10:102665195|102665477 hsa-miR-7706 1 0 0
chr10:102665195|102665477 hsa-miR-8085 1 0 0
chr10:102665195|102665477 hsa-miR-12118 1 0 0
chr10:102665195|102665477 hsa-miR-4433b-3p 0 1 0
chr10:102665195|102665477 hsa-miR-1247-3p 0 1 0
chr10:102665195|102665477 hsa-miR-6747-5p 0 1 0
chr10:102665195|102665477 hsa-miR-4433a-3p 1 1 0
chr10:102665195|102665477 hsa-miR-6894-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6720-5p 0 1 0
chr10:102665195|102665477 hsa-miR-6799-5p 1 0 0
chr10:102665195|102665477 hsa-miR-7851-3p 1 1 0
chr10:102665195|102665477 hsa-miR-6089 1 0 0
chr10:102665195|102665477 hsa-miR-6757-5p 1 0 0
chr10:102665195|102665477 hsa-miR-4695-5p 0 1 0
chr10:102665195|102665477 hsa-miR-6746-5p 1 1 0
chr10:102665195|102665477 hsa-miR-4722-5p 1 1 0
chr10:102665195|102665477 hsa-miR-6798-5p 1 0 0
chr10:102665195|102665477 hsa-miR-4793-3p 0 1 0
chr10:102665195|102665477 hsa-miR-6757-3p 1 0 0
chr10:102665195|102665477 hsa-miR-6771-5p 1 1 0
chr10:102665195|102665477 hsa-miR-4690-5p 1 0 0
chr10:102665195|102665477 hsa-miR-149-3p 1 0 0
chr10:102665195|102665477 hsa-miR-202-3p 1 0 0
chr10:102665195|102665477 hsa-miR-4695-3p 0 1 0
chr10:102665195|102665477 hsa-miR-1285-5p 0 1 0
chr10:102665195|102665477 hsa-miR-3664-3p 0 1 0
chr10:102665195|102665477 hsa-miR-1229-3p 0 1 0
chr10:102665195|102665477 hsa-miR-4802-5p 0 1 0
chr10:102665195|102665477 hsa-miR-627-5p 0 1 0
chr10:102665195|102665477 hsa-miR-1207-5p 1 0 0
chr10:102665195|102665477 hsa-miR-4763-3p 1 0 0
chr10:102665195|102665477 hsa-miR-6787-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6865-5p 0 1 0
chr10:102665195|102665477 hsa-miR-6775-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6726-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6752-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6754-5p 1 1 0
chr10:102665195|102665477 hsa-miR-6756-5p 1 0 0
chr10:102665195|102665477 hsa-miR-1249-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6722-3p 1 1 0
chr10:102665195|102665477 hsa-miR-6779-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6780a-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6797-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6808-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6879-5p 1 0 0
chr10:102665195|102665477 hsa-miR-4728-5p 1 1 0
chr10:102665195|102665477 hsa-miR-5196-5p 1 0 0
chr10:102665195|102665477 hsa-miR-1909-3p 1 0 0
chr10:102665195|102665477 hsa-miR-328-5p 1 0 0
chr10:102665195|102665477 hsa-miR-4701-3p 0 1 0
chr10:102665195|102665477 hsa-miR-4749-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6846-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6848-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6883-5p 1 1 0
chr10:102665195|102665477 hsa-miR-6889-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6831-5p 1 1 0
chr10:102665195|102665477 hsa-miR-377-5p 0 1 0
chr10:102665195|102665477 hsa-miR-6785-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6884-5p 0 1 0
chr10:102665195|102665477 hsa-miR-3619-5p 1 0 0
chr10:102665195|102665477 hsa-miR-6827-3p 0 1 0
chr10:102665195|102665477 hsa-miR-6807-3p 0 1 0
chr10:102665195|102665477 hsa-miR-6771-3p 0 1 0
chr10:102665195|102665477 hsa-miR-4781-5p 1 0 0
chr10:102665195|102665477 hsa-miR-367-3p 0 1 0
chr10:102665195|102665477 hsa-miR-371b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:102665195|102665477
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MCHLFFLRLKSHSCHPGWSAVVRSRLTATSISRVQAILLPQPPE
Nucleotide Sequence CTGTGCCATCTCTTTTTTTTGAGACTAAAGTCTCACTCTTGTCACCCAGGCTGGAGTGCAGTAGTGAGATCTCGGCTCACTGCAACCTCCATCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
CircID chr10:102665195|102665477
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MQPPSPGFRRFSCLSLLSSWDYRRLLPLLANFCTFSRDGVSPCWPG
Nucleotide Sequence CTGCAACCTCCATCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCTACCACTCCTGGCTAATTTTTGTACTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTAG
CircID chr10:102665195|102665477
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MRWNSVPSLFFETKVSLLSPRLECSSEISAHCNLHLPGSGDSPASAS
Nucleotide Sequence CTGAGATGGAATTCTGTGCCATCTCTTTTTTTTGAGACTAAAGTCTCACTCTTGTCACCCAGGCTGGAGTGCAGTAGTGAGATCTCGGCTCACTGCAACCTCCATCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTGA
CircID chr10:102665195|102665477
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MHSSLGDKSETLVSKKRDGTEFHLRSRMQGGVFQEL
Nucleotide Sequence CTGCACTCCAGCCTGGGTGACAAGAGTGAGACTTTAGTCTCAAAAAAAAGAGATGGCACAGAATTCCATCTCAGAAGTAGAATGCAGGGAGGGGTGTTCCAAGAACTG
CircID chr10:102665195|102665477
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MRQENRLNPGDGGCSEPRSHYCTPAWVTRVRL
Nucleotide Sequence CTGAGGCAGGAGAATCGCCTGAACCCGGGAGATGGAGGTTGCAGTGAGCCGAGATCTCACTACTGCACTCCAGCCTGGGTGACAAGAGTGAGACTTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab