CircRNA Information

General Information
circRNA Basic Information
CircID chr10:104040351|104041520
Strand -
CircType exon
Host Gene ENSG00000065618.15;
Algorism CIRI2;
Sequence CTTGGTCTCCCTTGGGACCTGGGGGGCCAGGTGGGCCTGGGGGGCCGGAGAGGAAGGTTTCTGAGTTGGACAGGAACGATCCTGGTGGGCCTGGTGGGCCTGGCAAACCCTCCCCTAGGAAAGAGAACCCCCAAGACTTATTAGTGCCAAGAGGGGAGCCAGGAACCCTCTGCTCAGGAGGAGGCAGCAGGGAAGCTCTTTCCTATAAGCCAGCCCAGAGGGCCCTGGGCTCAGGGTCCCATTGCTACCCACCTCTCACCTCCCCCTCCCACCTCCCAGTGGTAAGCTCGGCTCTCACCTGGTGGGCCTCGGGGTCCTGGTGGGCCTGGAATGGAAGGCCCTGGTGGCCCGCGTGGGCCGGGTGGGCCTGGGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:104040351|104041520 hsa-miR-96-5p 0 0 1
chr10:104040351|104041520 hsa-miR-96-3p 0 0 1
chr10:104040351|104041520 hsa-miR-149-5p 0 0 1
chr10:104040351|104041520 hsa-miR-149-3p 0 0 1
chr10:104040351|104041520 hsa-miR-370-5p 0 0 1
chr10:104040351|104041520 hsa-miR-370-3p 0 0 1
chr10:104040351|104041520 hsa-miR-326 0 0 1
chr10:104040351|104041520 hsa-miR-384 0 0 1
chr10:104040351|104041520 hsa-miR-504-5p 0 0 1
chr10:104040351|104041520 hsa-miR-504-3p 0 0 1
chr10:104040351|104041520 hsa-miR-612 1 1 1
chr10:104040351|104041520 hsa-miR-635 0 0 1
chr10:104040351|104041520 hsa-miR-1264 0 0 1
chr10:104040351|104041520 hsa-miR-1271-5p 0 0 1
chr10:104040351|104041520 hsa-miR-1271-3p 0 0 1
chr10:104040351|104041520 hsa-miR-1200 0 0 1
chr10:104040351|104041520 hsa-miR-1202 0 0 1
chr10:104040351|104041520 hsa-miR-1275 0 0 1
chr10:104040351|104041520 hsa-miR-1276 0 0 1
chr10:104040351|104041520 hsa-miR-125a-3p 0 0 1
chr10:104040351|104041520 hsa-miR-1225-3p 0 0 1
chr10:104040351|104041520 hsa-miR-941 0 0 1
chr10:104040351|104041520 hsa-miR-361-3p 0 1 1
chr10:104040351|104041520 hsa-miR-1224-3p 0 1 1
chr10:104040351|104041520 hsa-miR-125a-5p 0 1 1
chr10:104040351|104041520 hsa-miR-330-5p 0 1 1
chr10:104040351|104041520 hsa-miR-1274a 0 0 1
chr10:104040351|104041520 hsa-miR-1233 0 0 1
chr10:104040351|104041520 hsa-miR-125b 0 0 1
chr10:104040351|104041520 hsa-miR-1285 0 0 1
chr10:104040351|104041520 hsa-miR-484 0 1 0
chr10:104040351|104041520 hsa-miR-608 1 0 0
chr10:104040351|104041520 hsa-miR-762 1 0 0
chr10:104040351|104041520 hsa-miR-892b 1 1 0
chr10:104040351|104041520 hsa-miR-665 1 0 0
chr10:104040351|104041520 hsa-miR-1268a 1 0 0
chr10:104040351|104041520 hsa-miR-2117 0 1 0
chr10:104040351|104041520 hsa-miR-4313 0 1 0
chr10:104040351|104041520 hsa-miR-3918 0 1 0
chr10:104040351|104041520 hsa-miR-3943 0 1 0
chr10:104040351|104041520 hsa-miR-1268b 1 0 0
chr10:104040351|104041520 hsa-miR-4466 1 0 0
chr10:104040351|104041520 hsa-miR-3689c 1 1 0
chr10:104040351|104041520 hsa-miR-4498 1 1 0
chr10:104040351|104041520 hsa-miR-4537 1 1 0
chr10:104040351|104041520 hsa-miR-4651 1 1 0
chr10:104040351|104041520 hsa-miR-4656 1 0 0
chr10:104040351|104041520 hsa-miR-4706 1 0 0
chr10:104040351|104041520 hsa-miR-4710 1 0 0
chr10:104040351|104041520 hsa-miR-4739 0 1 0
chr10:104040351|104041520 hsa-miR-5698 1 0 0
chr10:104040351|104041520 hsa-miR-6075 0 1 0
chr10:104040351|104041520 hsa-miR-6133 1 0 0
chr10:104040351|104041520 hsa-miR-6134 0 1 0
chr10:104040351|104041520 hsa-miR-9900 0 1 0
chr10:104040351|104041520 hsa-miR-12114 1 0 0
chr10:104040351|104041520 hsa-miR-12127 1 0 0
chr10:104040351|104041520 hsa-miR-4726-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6836-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6861-5p 1 0 0
chr10:104040351|104041520 hsa-miR-7106-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6825-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6799-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6089 1 0 0
chr10:104040351|104041520 hsa-miR-3192-5p 1 1 0
chr10:104040351|104041520 hsa-miR-4755-3p 0 1 0
chr10:104040351|104041520 hsa-miR-23b-5p 0 1 0
chr10:104040351|104041520 hsa-miR-27b-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6742-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6748-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6793-5p 1 0 0
chr10:104040351|104041520 hsa-miR-4725-5p 0 1 0
chr10:104040351|104041520 hsa-miR-185-3p 1 0 0
chr10:104040351|104041520 hsa-miR-6829-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6732-5p 1 0 0
chr10:104040351|104041520 hsa-miR-23a-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6798-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6782-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6765-3p 0 1 0
chr10:104040351|104041520 hsa-miR-30b-3p 0 1 0
chr10:104040351|104041520 hsa-miR-5008-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6882-3p 0 1 0
chr10:104040351|104041520 hsa-miR-7109-5p 1 0 0
chr10:104040351|104041520 hsa-miR-1226-5p 1 0 0
chr10:104040351|104041520 hsa-miR-1909-5p 1 0 0
chr10:104040351|104041520 hsa-miR-3944-3p 1 0 0
chr10:104040351|104041520 hsa-miR-1229-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6753-5p 0 1 0
chr10:104040351|104041520 hsa-miR-1228-5p 1 0 0
chr10:104040351|104041520 hsa-miR-296-3p 1 0 0
chr10:104040351|104041520 hsa-miR-3667-3p 0 1 0
chr10:104040351|104041520 hsa-miR-7854-3p 0 1 0
chr10:104040351|104041520 hsa-miR-7111-3p 0 1 0
chr10:104040351|104041520 hsa-miR-4787-5p 1 0 0
chr10:104040351|104041520 hsa-miR-4733-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6824-5p 1 1 0
chr10:104040351|104041520 hsa-miR-1237-3p 1 0 0
chr10:104040351|104041520 hsa-miR-660-3p 0 1 0
chr10:104040351|104041520 hsa-miR-3158-3p 0 1 0
chr10:104040351|104041520 hsa-miR-584-3p 1 0 0
chr10:104040351|104041520 hsa-miR-6814-5p 0 1 0
chr10:104040351|104041520 hsa-miR-328-3p 1 0 0
chr10:104040351|104041520 hsa-miR-4746-5p 0 1 0
chr10:104040351|104041520 hsa-miR-7152-5p 0 1 0
chr10:104040351|104041520 hsa-miR-3173-5p 0 1 0
chr10:104040351|104041520 hsa-miR-1233-5p 1 0 0
chr10:104040351|104041520 hsa-miR-1273h-5p 0 1 0
chr10:104040351|104041520 hsa-miR-3689b-3p 1 1 0
chr10:104040351|104041520 hsa-miR-4763-3p 1 0 0
chr10:104040351|104041520 hsa-miR-6769b-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6778-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6787-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6812-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6816-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6870-5p 1 1 0
chr10:104040351|104041520 hsa-miR-1343-5p 1 0 0
chr10:104040351|104041520 hsa-miR-5001-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6726-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6737-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6743-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6752-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6754-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6756-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6769a-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6803-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6819-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6842-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6851-5p 1 1 0
chr10:104040351|104041520 hsa-miR-7110-5p 1 1 0
chr10:104040351|104041520 hsa-miR-1249-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6751-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6763-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6779-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6780a-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6797-5p 1 0 0
chr10:104040351|104041520 hsa-miR-7111-5p 1 1 0
chr10:104040351|104041520 hsa-miR-3620-5p 1 0 0
chr10:104040351|104041520 hsa-miR-4728-5p 1 1 0
chr10:104040351|104041520 hsa-miR-5196-5p 1 0 0
chr10:104040351|104041520 hsa-miR-1237-5p 1 0 0
chr10:104040351|104041520 hsa-miR-328-5p 1 0 0
chr10:104040351|104041520 hsa-miR-3689a-3p 1 1 0
chr10:104040351|104041520 hsa-miR-4649-5p 1 0 0
chr10:104040351|104041520 hsa-miR-4685-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6738-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6794-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6795-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6846-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6848-5p 1 0 0
chr10:104040351|104041520 hsa-miR-6883-5p 1 1 0
chr10:104040351|104041520 hsa-miR-4723-5p 1 0 0
chr10:104040351|104041520 hsa-miR-939-5p 1 0 0
chr10:104040351|104041520 hsa-miR-10396a-3p 1 0 0
chr10:104040351|104041520 hsa-miR-1199-5p 0 1 0
chr10:104040351|104041520 hsa-miR-4716-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6766-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6785-5p 1 1 0
chr10:104040351|104041520 hsa-miR-3689d 0 1 0
chr10:104040351|104041520 hsa-miR-10398-5p 1 1 0
chr10:104040351|104041520 hsa-miR-6893-3p 1 1 0
chr10:104040351|104041520 hsa-miR-193b-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6829-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6837-5p 0 1 0
chr10:104040351|104041520 hsa-miR-10392-3p 0 1 0
chr10:104040351|104041520 hsa-miR-3059-5p 0 1 0
chr10:104040351|104041520 hsa-miR-4723-3p 1 1 0
chr10:104040351|104041520 hsa-miR-6751-3p 0 1 0
chr10:104040351|104041520 hsa-miR-6769b-3p 0 1 0
chr10:104040351|104041520 hsa-miR-4768-5p 0 1 0
chr10:104040351|104041520 hsa-miR-6764-5p 0 1 0
chr10:104040351|104041520 hsa-miR-193a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:104040351|104041520
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MGGQVGLGGRRGRFLSWTGTILVGLVGLANPPLGKRTPKTY
Nucleotide Sequence CTGGGGGGCCAGGTGGGCCTGGGGGGCCGGAGAGGAAGGTTTCTGAGTTGGACAGGAACGATCCTGGTGGGCCTGGTGGGCCTGGCAAACCCTCCCCTAGGAAAGAGAACCCCCAAGACTTATTAG
CircID chr10:104040351|104041520
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MLPTSHLPLPPPSGKLGSHLVGLGVLVGLEWKALVARVGRVGLGD
Nucleotide Sequence TTGCTACCCACCTCTCACCTCCCCCTCCCACCTCCCAGTGGTAAGCTCGGCTCTCACCTGGTGGGCCTCGGGGTCCTGGTGGGCCTGGAATGGAAGGCCCTGGTGGCCCGCGTGGGCCGGGTGGGCCTGGGGGAC
CircID chr10:104040351|104041520
ORF Type ORF3
Protein Length 121
Nucleotide Length 363
Protein Sequence MGPGGPGGPGGPERKVSELDRNDPGGPGGPGKPSPRKENPQDLLVPRGEPGTLCSGGGSREALSYKPAQRALGSGSHCYPPLTSPSHLPVVSSALTWWASGSWWAWNGRPWWPAWAGWAWG
Nucleotide Sequence TTGGGACCTGGGGGGCCAGGTGGGCCTGGGGGGCCGGAGAGGAAGGTTTCTGAGTTGGACAGGAACGATCCTGGTGGGCCTGGTGGGCCTGGCAAACCCTCCCCTAGGAAAGAGAACCCCCAAGACTTATTAGTGCCAAGAGGGGAGCCAGGAACCCTCTGCTCAGGAGGAGGCAGCAGGGAAGCTCTTTCCTATAAGCCAGCCCAGAGGGCCCTGGGCTCAGGGTCCCATTGCTACCCACCTCTCACCTCCCCCTCCCACCTCCCAGTGGTAAGCTCGGCTCTCACCTGGTGGGCCTCGGGGTCCTGGTGGGCCTGGAATGGAAGGCCCTGGTGGCCCGCGTGGGCCGGGTGGGCCTGGGGG
CircID chr10:104040351|104041520
ORF Type ORF4
Protein Length 63
Nucleotide Length 189
Protein Sequence MLPPPEQRVPGSPLGTNKSWGFSFLGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQ
Nucleotide Sequence CTGCTGCCTCCTCCTGAGCAGAGGGTTCCTGGCTCCCCTCTTGGCACTAATAAGTCTTGGGGGTTCTCTTTCCTAGGGGAGGGTTTGCCAGGCCCACCAGGCCCACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCCTCTCCGGCCCCCCAGGCCCACCTGGCCCCCCAGGTCCCAAGGGAGACCAA
CircID chr10:104040351|104041520
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MSPGPSGLAYRKELPCCLLLSRGFLAPLLALISLGGSLS
Nucleotide Sequence CTGAGCCCAGGGCCCTCTGGGCTGGCTTATAGGAAAGAGCTTCCCTGCTGCCTCCTCCTGAGCAGAGGGTTCCTGGCTCCCCTCTTGGCACTAATAAGTCTTGGGGGTTCTCTTTCCTAG
CircID chr10:104040351|104041520
ORF Type ORF6
Protein Length 44
Nucleotide Length 132
Protein Sequence MGVLFPRGGFARPTRPTRIVPVQLRNLPLRPPRPTWPPRSQGRP
Nucleotide Sequence TTGGGGGTTCTCTTTCCTAGGGGAGGGTTTGCCAGGCCCACCAGGCCCACCAGGATCGTTCCTGTCCAACTCAGAAACCTTCCTCTCCGGCCCCCCAGGCCCACCTGGCCCCCCAGGTCCCAAGGGAGACCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab