CircNet

General Information

circRNA Basic Information

CircID	chr10:112159911\|112164610
Strand	-
CircType	exon
Host Gene	ENSG00000119927.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAATATTTAGAAAGCCAAAGTCAGAAACCGGTGTCTGCTCTACTTTCCCTGGAGCAAGCGTTGTTACCAGCTATACTTCCTTCAAGACCCAGTGATGCTGCTGATGAAGGTAGAGACACGTCCATTAATGAGTCCAGAAATGCAACAGATGAATCCCTACGAAGGAGGTTGATTGCAAATCTGGCTGAGCATATTCTATTCACTTGCAGCCTTTATGCAGTTCTGAACAAGAGGGGACTGGGGGGTCCCACTAGCACCCCACCTAACCTGATCAGCCAGGAGCAGCTGGTGCGGAAGGCGGCCAGCCTGTGCTACCTTCTCTCCAATGAAGGCACCATCTCACTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:112159911\|112164610	hsa-miR-198	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:112159911\|112164610
ORF Type	ORF1
Protein Length	105
Nucleotide Length	315
Protein Sequence	VSALLSLEQALLPAILPSRPSDAADEGRDTSINESRNATDESLRRRLIANLAEHILFTCSLYAVLNKRGLGGPTSTPPNLISQEQLVRKAASLCYLLSNEGTISL
Nucleotide Sequence	GTGTCTGCTCTACTTTCCCTGGAGCAAGCGTTGTTACCAGCTATACTTCCTTCAAGACCCAGTGATGCTGCTGATGAAGGTAGAGACACGTCCATTAATGAGTCCAGAAATGCAACAGATGAATCCCTACGAAGGAGGTTGATTGCAAATCTGGCTGAGCATATTCTATTCACTTGCAGCCTTTATGCAGTTCTGAACAAGAGGGGACTGGGGGGTCCCACTAGCACCCCACCTAACCTGATCAGCCAGGAGCAGCTGGTGCGGAAGGCGGCCAGCCTGTGCTACCTTCTCTCCAATGAAGGCACCATCTCACTG

CircID	chr10:112159911\|112164610
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MDVSLPSSAASLGLEGSIAGNNACSRESRADTGF*
Nucleotide Sequence	ATGGACGTGTCTCTACCTTCATCAGCAGCATCACTGGGTCTTGAAGGAAGTATAGCTGGTAACAACGCTTGCTCCAGGGAAAGTAGAGCAGACACCGGTTTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:112159911\|112164610	ELAVL1	2	2	0
chr10:112159911\|112164610	SF3B4	2	0	0
chr10:112159911\|112164610	PRPF8	0	4	4
chr10:112159911\|112164610	FMR1	0	0	2
chr10:112159911\|112164610	NUDT21	0	2	1
chr10:112159911\|112164610	CPSF1	0	1	0
chr10:112159911\|112164610	SRSF7	0	0	1
chr10:112159911\|112164610	SRSF1	0	0	1
chr10:112159911\|112164610	NOP58	0	2	0
chr10:112159911\|112164610	U2AF1	0	0	2
chr10:112159911\|112164610	U2AF2	3	0	2
chr10:112159911\|112164610	SRSF9	0	0	1
chr10:112159911\|112164610	RBM10	1	1	0
chr10:112159911\|112164610	SF3A3	2	0	0
chr10:112159911\|112164610	PTBP1	0	1	0
chr10:112159911\|112164610	HNRNPC	11	7	0
chr10:112159911\|112164610	RANGAP1	0	0	1
chr10:112159911\|112164610	LIN28B	0	1	0
chr10:112159911\|112164610	FXR1	0	0	1
chr10:112159911\|112164610	FXR2	0	0	1
chr10:112159911\|112164610	IGF2BP1	0	0	2
chr10:112159911\|112164610	IGF2BP3	0	0	2
chr10:112159911\|112164610	TARDBP	0	2	0
chr10:112159911\|112164610	YTHDC1	1	0	0
chr10:112159911\|112164610	BUD13	0	0	2
chr10:112159911\|112164610	RBFOX2	0	3	0
chr10:112159911\|112164610	CSTF2T	1	2	1
chr10:112159911\|112164610	CPSF7	0	1	0
chr10:112159911\|112164610	EIF4A3	0	1	5
chr10:112159911\|112164610	AGO2	0	0	1

CircRNA Information