CircRNA Information

General Information
circRNA Basic Information
CircID chr10:116058114|116058301
Strand -
CircType exon
Host Gene ENSG00000151892.13;
Algorism CIRI2;
Sequence CTGCACTGCCACAGTCACCCGGTCTCGCCCCAGGTAATCAACCTTTACTGATTTTCAACGGCCCTGGTTCCCTATACTCAGGACATCCACTGGATTTTCTAATTCTTCTTCCTACTTCACTCTAGTCTTAGGATCTGTGTTATGCTTGCAGGTGTCAGGGGTCAATGTGCACATTCGAAGTTTTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:116058114|116058301 hsa-miR-148a-5p 0 0 1
chr10:116058114|116058301 hsa-miR-148a-3p 0 0 1
chr10:116058114|116058301 hsa-miR-34a-5p 0 0 1
chr10:116058114|116058301 hsa-miR-34a-3p 0 0 1
chr10:116058114|116058301 hsa-miR-152-5p 0 0 1
chr10:116058114|116058301 hsa-miR-152-3p 0 0 1
chr10:116058114|116058301 hsa-miR-134-5p 0 0 1
chr10:116058114|116058301 hsa-miR-134-3p 0 0 1
chr10:116058114|116058301 hsa-miR-148b-5p 0 0 1
chr10:116058114|116058301 hsa-miR-148b-3p 0 0 1
chr10:116058114|116058301 hsa-miR-449a 0 0 1
chr10:116058114|116058301 hsa-miR-496 0 0 1
chr10:116058114|116058301 hsa-miR-619-5p 0 0 1
chr10:116058114|116058301 hsa-miR-619-3p 0 0 1
chr10:116058114|116058301 hsa-miR-449b-5p 0 0 1
chr10:116058114|116058301 hsa-miR-449b-3p 0 0 1
chr10:116058114|116058301 hsa-miR-1323 0 0 1
chr10:116058114|116058301 hsa-miR-943 0 0 1
chr10:116058114|116058301 hsa-miR-1200 0 0 1
chr10:116058114|116058301 hsa-miR-548m 0 0 1
chr10:116058114|116058301 hsa-miR-548o-3p 0 0 1
chr10:116058114|116058301 hsa-miR-548p 0 0 1
chr10:116058114|116058301 hsa-miR-1825 0 0 1
chr10:116058114|116058301 hsa-miR-548o 0 0 1
chr10:116058114|116058301 hsa-miR-199a-5p 0 0 1
chr10:116058114|116058301 hsa-miR-199b-5p 0 0 1
chr10:116058114|116058301 hsa-miR-34c-5p 0 0 1
chr10:116058114|116058301 hsa-miR-499-5p 0 0 1
chr10:116058114|116058301 hsa-miR-2110 1 1 0
chr10:116058114|116058301 hsa-miR-4458 1 0 0
chr10:116058114|116058301 hsa-miR-4463 1 0 0
chr10:116058114|116058301 hsa-miR-4506 1 0 0
chr10:116058114|116058301 hsa-miR-4682 1 0 0
chr10:116058114|116058301 hsa-miR-4741 1 0 0
chr10:116058114|116058301 hsa-miR-6090 1 0 0
chr10:116058114|116058301 hsa-miR-8089 1 0 0
chr10:116058114|116058301 hsa-miR-12115 1 0 0
chr10:116058114|116058301 hsa-miR-135a-3p 1 1 0
chr10:116058114|116058301 hsa-miR-4433a-3p 1 0 0
chr10:116058114|116058301 hsa-miR-6861-5p 1 0 0
chr10:116058114|116058301 hsa-miR-4687-3p 1 0 0
chr10:116058114|116058301 hsa-miR-7851-3p 0 1 0
chr10:116058114|116058301 hsa-miR-6089 1 1 0
chr10:116058114|116058301 hsa-miR-7847-3p 1 0 0
chr10:116058114|116058301 hsa-miR-6746-5p 1 0 0
chr10:116058114|116058301 hsa-miR-593-5p 1 0 0
chr10:116058114|116058301 hsa-miR-4655-5p 1 0 0
chr10:116058114|116058301 hsa-miR-197-5p 1 0 0
chr10:116058114|116058301 hsa-miR-8069 1 0 0
chr10:116058114|116058301 hsa-miR-6776-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6742-5p 1 0 0
chr10:116058114|116058301 hsa-miR-1292-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6829-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6760-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6850-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6784-5p 1 0 0
chr10:116058114|116058301 hsa-miR-1228-5p 1 0 0
chr10:116058114|116058301 hsa-miR-92b-5p 1 0 0
chr10:116058114|116058301 hsa-miR-149-3p 1 0 0
chr10:116058114|116058301 hsa-miR-193a-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6789-5p 1 0 0
chr10:116058114|116058301 hsa-miR-2276-3p 0 1 0
chr10:116058114|116058301 hsa-miR-6781-5p 1 0 0
chr10:116058114|116058301 hsa-let-7e-5p 1 0 0
chr10:116058114|116058301 hsa-miR-483-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6802-3p 1 0 0
chr10:116058114|116058301 hsa-miR-5582-3p 0 1 0
chr10:116058114|116058301 hsa-miR-6812-5p 1 1 0
chr10:116058114|116058301 hsa-miR-6816-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6752-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6797-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6836-5p 1 0 0
chr10:116058114|116058301 hsa-miR-4649-5p 1 1 0
chr10:116058114|116058301 hsa-miR-4685-5p 1 1 0
chr10:116058114|116058301 hsa-miR-6729-5p 1 1 0
chr10:116058114|116058301 hsa-miR-1266-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6791-5p 1 0 0
chr10:116058114|116058301 hsa-miR-6822-5p 1 1 0
chr10:116058114|116058301 hsa-miR-6837-5p 0 1 0
chr10:116058114|116058301 hsa-miR-383-5p 1 0 0
chr10:116058114|116058301 hsa-miR-10522-5p 0 1 0
chr10:116058114|116058301 hsa-miR-499a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:116058114|116058301
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MPQSPGLAPGNQPLLIFNGPGSLYSGHPLDFLILLPTSL
Nucleotide Sequence CTGCCACAGTCACCCGGTCTCGCCCCAGGTAATCAACCTTTACTGATTTTCAACGGCCCTGGTTCCCTATACTCAGGACATCCACTGGATTTTCTAATTCTTCTTCCTACTTCACTCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab