CircRNA Information

General Information
circRNA Basic Information
CircID chr10:119170065|119170274
Strand -
CircType exon
Host Gene ENSG00000165672.6;
Algorism CIRI2;
Sequence AGCAGGCTGCAGCCTCGAACTTCTGGCTCAACTGATCCTCCCACCTCAGACTCCCAAGTAGCGTGACTATAGGTGTGTGTCACTGTGTCCGGTTATTTAACCTACAGGTTTTAACAGTCTGTCTTAAAAGGATGTGGAAATTTCAGGTATCAATCACTCATGGAAAAGGCAGGTTAGAGAAAACTCAGGATAAAAGATGCTTCTCCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:119170065|119170274 hsa-miR-208a-5p 0 0 1
chr10:119170065|119170274 hsa-miR-208a-3p 0 0 1
chr10:119170065|119170274 hsa-miR-154-5p 0 0 1
chr10:119170065|119170274 hsa-miR-154-3p 0 0 1
chr10:119170065|119170274 hsa-miR-587 0 0 1
chr10:119170065|119170274 hsa-miR-596 0 0 1
chr10:119170065|119170274 hsa-miR-641 0 0 1
chr10:119170065|119170274 hsa-miR-649 0 1 1
chr10:119170065|119170274 hsa-miR-890 0 0 1
chr10:119170065|119170274 hsa-miR-208b-5p 0 0 1
chr10:119170065|119170274 hsa-miR-208b-3p 0 0 1
chr10:119170065|119170274 hsa-miR-1228-5p 0 0 1
chr10:119170065|119170274 hsa-miR-1228-3p 0 0 1
chr10:119170065|119170274 hsa-miR-1200 0 1 1
chr10:119170065|119170274 hsa-miR-485-5p 0 0 1
chr10:119170065|119170274 hsa-miR-1184 0 0 1
chr10:119170065|119170274 hsa-miR-490-3p 0 0 1
chr10:119170065|119170274 hsa-miR-501-5p 0 0 1
chr10:119170065|119170274 hsa-miR-513a-3p 0 0 1
chr10:119170065|119170274 hsa-miR-362-3p 0 0 1
chr10:119170065|119170274 hsa-miR-128 0 0 1
chr10:119170065|119170274 hsa-miR-329 0 0 1
chr10:119170065|119170274 hsa-miR-499-5p 0 0 1
chr10:119170065|119170274 hsa-miR-661 1 0 0
chr10:119170065|119170274 hsa-miR-4463 1 0 0
chr10:119170065|119170274 hsa-miR-4651 1 0 0
chr10:119170065|119170274 hsa-miR-4656 1 0 0
chr10:119170065|119170274 hsa-miR-4682 0 1 0
chr10:119170065|119170274 hsa-miR-4739 1 0 0
chr10:119170065|119170274 hsa-miR-4765 1 1 0
chr10:119170065|119170274 hsa-miR-5787 1 0 0
chr10:119170065|119170274 hsa-miR-6133 1 1 0
chr10:119170065|119170274 hsa-miR-6134 1 1 0
chr10:119170065|119170274 hsa-miR-8485 0 1 0
chr10:119170065|119170274 hsa-miR-12119 1 1 0
chr10:119170065|119170274 hsa-miR-6765-5p 1 0 0
chr10:119170065|119170274 hsa-miR-3150a-3p 1 0 0
chr10:119170065|119170274 hsa-miR-7106-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6894-5p 1 1 0
chr10:119170065|119170274 hsa-miR-7851-3p 1 1 0
chr10:119170065|119170274 hsa-miR-6807-5p 0 1 0
chr10:119170065|119170274 hsa-miR-6746-5p 1 0 0
chr10:119170065|119170274 hsa-miR-7160-5p 1 0 0
chr10:119170065|119170274 hsa-miR-1178-5p 0 1 0
chr10:119170065|119170274 hsa-miR-6742-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6871-5p 1 1 0
chr10:119170065|119170274 hsa-miR-6796-5p 1 0 0
chr10:119170065|119170274 hsa-miR-3126-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6782-5p 1 0 0
chr10:119170065|119170274 hsa-miR-5001-3p 1 0 0
chr10:119170065|119170274 hsa-miR-149-3p 1 0 0
chr10:119170065|119170274 hsa-miR-937-5p 1 0 0
chr10:119170065|119170274 hsa-miR-3162-5p 1 0 0
chr10:119170065|119170274 hsa-miR-7162-3p 0 1 0
chr10:119170065|119170274 hsa-miR-891a-3p 0 1 0
chr10:119170065|119170274 hsa-miR-6839-3p 0 1 0
chr10:119170065|119170274 hsa-miR-1233-5p 1 0 0
chr10:119170065|119170274 hsa-miR-1273h-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6769b-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6778-5p 1 1 0
chr10:119170065|119170274 hsa-miR-6787-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6812-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6752-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6756-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6769a-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6803-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6819-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6851-5p 1 0 0
chr10:119170065|119170274 hsa-miR-7110-5p 1 0 0
chr10:119170065|119170274 hsa-miR-1249-5p 1 1 0
chr10:119170065|119170274 hsa-miR-6751-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6763-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6779-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6780a-5p 1 1 0
chr10:119170065|119170274 hsa-miR-7111-5p 1 0 0
chr10:119170065|119170274 hsa-miR-4728-5p 1 0 0
chr10:119170065|119170274 hsa-miR-4726-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6795-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6848-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6887-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6511a-5p 1 0 0
chr10:119170065|119170274 hsa-miR-6766-5p 1 0 0
chr10:119170065|119170274 hsa-miR-329-3p 0 1 0
chr10:119170065|119170274 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:119170065|119170274
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MWKFQVSITHGKGRLEKTQDKRCFSL
Nucleotide Sequence ATGTGGAAATTTCAGGTATCAATCACTCATGGAAAAGGCAGGTTAGAGAAAACTCAGGATAAAAGATGCTTCTCCCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab