CircRNA Information

General Information
circRNA Basic Information
CircID chr10:119672384|119672605
Strand -
CircType exon
Host Gene ENSG00000151929.8;
Algorism CIRI2;
Sequence GAGCAGAACGTTACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAGCCCAGAAGACGCACTACCCAGCGCAGCAGGGGGAGTACCAGACCCACCAGCCTGTGTACCACAAGATCCAGGGGGATGACTGGGAGCCCCGGCCCCTGCGGGCGGCATCCCCGTTCAGGTCATCTGTCCAGGGTGCATCGAGCCGGGAGGGCTCACCAGCCAGGAGCAGCACGCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:119672384|119672605 hsa-miR-370-5p 0 0 1
chr10:119672384|119672605 hsa-miR-370-3p 0 0 1
chr10:119672384|119672605 hsa-miR-581 0 0 1
chr10:119672384|119672605 hsa-miR-612 1 1 1
chr10:119672384|119672605 hsa-miR-631 0 0 1
chr10:119672384|119672605 hsa-miR-541-5p 0 0 1
chr10:119672384|119672605 hsa-miR-541-3p 0 0 1
chr10:119672384|119672605 hsa-miR-887-5p 0 0 1
chr10:119672384|119672605 hsa-miR-887-3p 0 0 1
chr10:119672384|119672605 hsa-miR-1225-3p 0 0 1
chr10:119672384|119672605 hsa-miR-542-5p 0 0 1
chr10:119672384|119672605 hsa-miR-193a-5p 0 0 1
chr10:119672384|119672605 hsa-miR-654-5p 0 0 1
chr10:119672384|119672605 hsa-miR-331-3p 0 0 1
chr10:119672384|119672605 hsa-miR-767-3p 0 0 1
chr10:119672384|119672605 hsa-miR-502-3p 0 1 1
chr10:119672384|119672605 hsa-miR-501-3p 0 1 1
chr10:119672384|119672605 hsa-miR-1233 0 0 1
chr10:119672384|119672605 hsa-miR-138 0 0 1
chr10:119672384|119672605 hsa-miR-1285 0 0 1
chr10:119672384|119672605 hsa-miR-602 1 0 0
chr10:119672384|119672605 hsa-miR-608 1 0 0
chr10:119672384|119672605 hsa-miR-663a 1 0 0
chr10:119672384|119672605 hsa-miR-658 1 0 0
chr10:119672384|119672605 hsa-miR-762 1 1 0
chr10:119672384|119672605 hsa-miR-1231 1 0 0
chr10:119672384|119672605 hsa-miR-1268a 1 0 0
chr10:119672384|119672605 hsa-miR-2861 1 0 0
chr10:119672384|119672605 hsa-miR-3147 1 0 0
chr10:119672384|119672605 hsa-miR-3154 1 0 0
chr10:119672384|119672605 hsa-miR-3621 1 0 0
chr10:119672384|119672605 hsa-miR-1268b 1 0 0
chr10:119672384|119672605 hsa-miR-378g 1 1 0
chr10:119672384|119672605 hsa-miR-378h 1 0 0
chr10:119672384|119672605 hsa-miR-4486 1 0 0
chr10:119672384|119672605 hsa-miR-4492 1 1 0
chr10:119672384|119672605 hsa-miR-4498 1 1 0
chr10:119672384|119672605 hsa-miR-4505 1 1 0
chr10:119672384|119672605 hsa-miR-4507 1 0 0
chr10:119672384|119672605 hsa-miR-4508 1 0 0
chr10:119672384|119672605 hsa-miR-4525 1 0 0
chr10:119672384|119672605 hsa-miR-4533 1 1 0
chr10:119672384|119672605 hsa-miR-1587 1 1 0
chr10:119672384|119672605 hsa-miR-4651 1 0 0
chr10:119672384|119672605 hsa-miR-4656 1 0 0
chr10:119672384|119672605 hsa-miR-4672 0 1 0
chr10:119672384|119672605 hsa-miR-4674 1 0 0
chr10:119672384|119672605 hsa-miR-4721 1 0 0
chr10:119672384|119672605 hsa-miR-4734 1 0 0
chr10:119672384|119672605 hsa-miR-4739 1 0 0
chr10:119672384|119672605 hsa-miR-4741 1 0 0
chr10:119672384|119672605 hsa-miR-4748 1 0 0
chr10:119672384|119672605 hsa-miR-5572 1 0 0
chr10:119672384|119672605 hsa-miR-5787 1 1 0
chr10:119672384|119672605 hsa-miR-6127 1 0 0
chr10:119672384|119672605 hsa-miR-6132 1 0 0
chr10:119672384|119672605 hsa-miR-6133 1 0 0
chr10:119672384|119672605 hsa-miR-6745 1 1 0
chr10:119672384|119672605 hsa-miR-6860 1 0 0
chr10:119672384|119672605 hsa-miR-9718 1 0 0
chr10:119672384|119672605 hsa-miR-12118 0 1 0
chr10:119672384|119672605 hsa-miR-187-3p 1 0 0
chr10:119672384|119672605 hsa-miR-150-3p 1 1 0
chr10:119672384|119672605 hsa-miR-6861-5p 1 1 0
chr10:119672384|119672605 hsa-miR-7106-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6894-5p 1 0 0
chr10:119672384|119672605 hsa-miR-4687-3p 1 0 0
chr10:119672384|119672605 hsa-miR-6799-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3692-5p 1 1 0
chr10:119672384|119672605 hsa-miR-8071 1 0 0
chr10:119672384|119672605 hsa-miR-6757-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6880-5p 1 0 0
chr10:119672384|119672605 hsa-miR-4695-5p 1 0 0
chr10:119672384|119672605 hsa-miR-4722-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3064-5p 0 1 0
chr10:119672384|119672605 hsa-miR-6842-3p 0 1 0
chr10:119672384|119672605 hsa-miR-23b-5p 1 0 0
chr10:119672384|119672605 hsa-miR-197-5p 1 0 0
chr10:119672384|119672605 hsa-miR-191-3p 0 1 0
chr10:119672384|119672605 hsa-miR-8069 1 0 0
chr10:119672384|119672605 hsa-miR-5589-5p 0 1 0
chr10:119672384|119672605 hsa-miR-3663-5p 1 0 0
chr10:119672384|119672605 hsa-miR-185-3p 1 0 0
chr10:119672384|119672605 hsa-miR-6829-5p 1 1 0
chr10:119672384|119672605 hsa-miR-3190-3p 0 1 0
chr10:119672384|119672605 hsa-miR-23a-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6765-3p 1 0 0
chr10:119672384|119672605 hsa-miR-7855-5p 0 1 0
chr10:119672384|119672605 hsa-miR-4711-3p 1 1 0
chr10:119672384|119672605 hsa-miR-615-5p 1 0 0
chr10:119672384|119672605 hsa-miR-5088-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6772-3p 0 1 0
chr10:119672384|119672605 hsa-miR-7109-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3944-3p 1 0 0
chr10:119672384|119672605 hsa-miR-1229-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6784-5p 0 1 0
chr10:119672384|119672605 hsa-miR-3127-5p 1 0 0
chr10:119672384|119672605 hsa-miR-296-3p 1 0 0
chr10:119672384|119672605 hsa-miR-4787-5p 0 1 0
chr10:119672384|119672605 hsa-miR-4638-3p 1 0 0
chr10:119672384|119672605 hsa-miR-4446-3p 1 1 0
chr10:119672384|119672605 hsa-miR-149-3p 1 0 0
chr10:119672384|119672605 hsa-miR-6781-5p 0 1 0
chr10:119672384|119672605 hsa-miR-1225-5p 1 0 0
chr10:119672384|119672605 hsa-miR-4687-5p 0 1 0
chr10:119672384|119672605 hsa-miR-744-5p 1 0 0
chr10:119672384|119672605 hsa-miR-1245b-3p 0 1 0
chr10:119672384|119672605 hsa-miR-2277-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6729-3p 0 1 0
chr10:119672384|119672605 hsa-miR-4520-3p 0 1 0
chr10:119672384|119672605 hsa-miR-1233-5p 1 0 0
chr10:119672384|119672605 hsa-miR-1273h-5p 1 0 0
chr10:119672384|119672605 hsa-miR-4763-3p 1 1 0
chr10:119672384|119672605 hsa-miR-6769b-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6778-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6816-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6775-5p 1 0 0
chr10:119672384|119672605 hsa-miR-5001-5p 1 1 0
chr10:119672384|119672605 hsa-miR-6726-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6752-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6754-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6756-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6769a-5p 0 1 0
chr10:119672384|119672605 hsa-miR-6813-5p 1 1 0
chr10:119672384|119672605 hsa-miR-1249-5p 1 1 0
chr10:119672384|119672605 hsa-miR-6722-3p 1 1 0
chr10:119672384|119672605 hsa-miR-6779-5p 1 1 0
chr10:119672384|119672605 hsa-miR-6780a-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6797-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6879-5p 1 0 0
chr10:119672384|119672605 hsa-miR-7111-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3620-5p 1 1 0
chr10:119672384|119672605 hsa-miR-4728-5p 1 0 0
chr10:119672384|119672605 hsa-miR-5189-5p 1 0 0
chr10:119672384|119672605 hsa-miR-10396a-5p 1 0 0
chr10:119672384|119672605 hsa-miR-10396b-5p 1 0 0
chr10:119672384|119672605 hsa-miR-1237-5p 1 0 0
chr10:119672384|119672605 hsa-miR-1909-3p 1 1 0
chr10:119672384|119672605 hsa-miR-328-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6794-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6846-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6848-5p 1 1 0
chr10:119672384|119672605 hsa-miR-6858-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6883-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3187-5p 1 0 0
chr10:119672384|119672605 hsa-miR-939-5p 1 0 0
chr10:119672384|119672605 hsa-miR-3940-5p 1 0 0
chr10:119672384|119672605 hsa-miR-7151-3p 1 0 0
chr10:119672384|119672605 hsa-miR-3173-3p 1 0 0
chr10:119672384|119672605 hsa-miR-4747-5p 1 1 0
chr10:119672384|119672605 hsa-miR-6785-5p 1 1 0
chr10:119672384|119672605 hsa-miR-10398-5p 0 1 0
chr10:119672384|119672605 hsa-miR-6791-5p 1 0 0
chr10:119672384|119672605 hsa-miR-9851-5p 1 0 0
chr10:119672384|119672605 hsa-miR-6810-3p 0 1 0
chr10:119672384|119672605 hsa-miR-10400-3p 1 0 0
chr10:119672384|119672605 hsa-miR-3085-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:119672384|119672605
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MRAASPFRSSVQGASSREGSPARSSTP
Nucleotide Sequence CTGCGGGCGGCATCCCCGTTCAGGTCATCTGTCCAGGGTGCATCGAGCCGGGAGGGCTCACCAGCCAGGAGCAGCACGCCA
CircID chr10:119672384|119672605
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MCTTRSRGMTGSPGPCGRHPRSGHLSRVHRAGRAHQPGAAR
Nucleotide Sequence CTGTGTACCACAAGATCCAGGGGGATGACTGGGAGCCCCGGCCCCTGCGGGCGGCATCCCCGTTCAGGTCATCTGTCCAGGGTGCATCGAGCCGGGAGGGCTCACCAGCCAGGAGCAGCACGC
CircID chr10:119672384|119672605
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MGAPAPAGGIPVQVICPGCIEPGGLTSQEQHA
Nucleotide Sequence CTGGGAGCCCCGGCCCCTGCGGGCGGCATCCCCGTTCAGGTCATCTGTCCAGGGTGCATCGAGCCGGGAGGGCTCACCAGCCAGGAGCAGCACGCC
CircID chr10:119672384|119672605
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MDLVVHRLVGLVLPLLRWVVRLLGLVEGGLGCWPGNVLL
Nucleotide Sequence CTGGATCTTGTGGTACACAGGCTGGTGGGTCTGGTACTCCCCCTGCTGCGCTGGGTAGTGCGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTGCTGGCCGGGTAACGTTCTGCTC
CircID chr10:119672384|119672605
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MLLAGEPSRLDAPWTDDLNGDAARRGRGSQSSPWILWYTGWWVWYSPCCAG
Nucleotide Sequence CTGCTCCTGGCTGGTGAGCCCTCCCGGCTCGATGCACCCTGGACAGATGACCTGAACGGGGATGCCGCCCGCAGGGGCCGGGGCTCCCAGTCATCCCCCTGGATCTTGTGGTACACAGGCTGGTGGGTCTGGTACTCCCCCTGCTGCGCTGGGTAG
CircID chr10:119672384|119672605
ORF Type ORF6
Protein Length 47
Nucleotide Length 144
Protein Sequence MPPAGAGAPSHPPGSCGTQAGGSGTPPAALGSASSGLGGRRAGLLAG
Nucleotide Sequence ATGCCGCCCGCAGGGGCCGGGGCTCCCAGTCATCCCCCTGGATCTTGTGGTACACAGGCTGGTGGGTCTGGTACTCCCCCTGCTGCGCTGGGTAGTGCGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTGCTGGCCGGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab