CircRNA Information

General Information
circRNA Basic Information
CircID chr10:119677001|119677114
Strand -
CircType exon
Host Gene ENSG00000151929.8;
Algorism CIRI2;
Sequence GGTGTCAGGAAGGTTCAGACCATCTTGGAAAAACTTGAACAGAAAGCCATTGATGTCCCAGGTCAAGTCCAGGTCTATGAACTCCAGCCCAGCAACCTTGAAGCAGATCAGCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:119677001|119677114 hsa-miR-26b-5p 0 0 1
chr10:119677001|119677114 hsa-miR-26b-3p 0 0 1
chr10:119677001|119677114 hsa-miR-192-5p 0 0 1
chr10:119677001|119677114 hsa-miR-192-3p 0 0 1
chr10:119677001|119677114 hsa-miR-215-5p 0 0 1
chr10:119677001|119677114 hsa-miR-215-3p 0 0 1
chr10:119677001|119677114 hsa-miR-135b-5p 0 0 1
chr10:119677001|119677114 hsa-miR-135b-3p 0 0 1
chr10:119677001|119677114 hsa-miR-422a 0 0 1
chr10:119677001|119677114 hsa-miR-376b-5p 0 0 1
chr10:119677001|119677114 hsa-miR-376b-3p 0 0 1
chr10:119677001|119677114 hsa-miR-619-5p 0 0 1
chr10:119677001|119677114 hsa-miR-619-3p 0 0 1
chr10:119677001|119677114 hsa-miR-631 0 1 1
chr10:119677001|119677114 hsa-miR-1200 0 0 1
chr10:119677001|119677114 hsa-miR-1297 0 0 1
chr10:119677001|119677114 hsa-miR-1302 0 0 1
chr10:119677001|119677114 hsa-miR-378 0 0 1
chr10:119677001|119677114 hsa-miR-26a 0 0 1
chr10:119677001|119677114 hsa-miR-135a 0 0 1
chr10:119677001|119677114 hsa-miR-376a 0 0 1
chr10:119677001|119677114 hsa-miR-632 1 0 0
chr10:119677001|119677114 hsa-miR-762 1 0 0
chr10:119677001|119677114 hsa-miR-1293 1 0 0
chr10:119677001|119677114 hsa-miR-378b 0 1 0
chr10:119677001|119677114 hsa-miR-378c 0 1 0
chr10:119677001|119677114 hsa-miR-3661 1 1 0
chr10:119677001|119677114 hsa-miR-378e 0 1 0
chr10:119677001|119677114 hsa-miR-378f 0 1 0
chr10:119677001|119677114 hsa-miR-378g 0 1 0
chr10:119677001|119677114 hsa-miR-4430 0 1 0
chr10:119677001|119677114 hsa-miR-378h 0 1 0
chr10:119677001|119677114 hsa-miR-4505 1 0 0
chr10:119677001|119677114 hsa-miR-1587 0 1 0
chr10:119677001|119677114 hsa-miR-4539 1 0 0
chr10:119677001|119677114 hsa-miR-4656 1 0 0
chr10:119677001|119677114 hsa-miR-4686 1 1 0
chr10:119677001|119677114 hsa-miR-8058 0 1 0
chr10:119677001|119677114 hsa-miR-8075 1 0 0
chr10:119677001|119677114 hsa-miR-3692-5p 0 1 0
chr10:119677001|119677114 hsa-miR-7851-3p 0 1 0
chr10:119677001|119677114 hsa-miR-3663-5p 1 0 0
chr10:119677001|119677114 hsa-miR-5001-5p 0 1 0
chr10:119677001|119677114 hsa-miR-3620-5p 1 1 0
chr10:119677001|119677114 hsa-miR-10392-5p 1 0 0
chr10:119677001|119677114 hsa-miR-378a-3p 0 1 0
chr10:119677001|119677114 hsa-miR-378d 0 1 0
chr10:119677001|119677114 hsa-miR-6506-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:119677001|119677114
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MEKLEQKAIDVPGQVQVYELQPSNLEADQP
Nucleotide Sequence TTGGAAAAACTTGAACAGAAAGCCATTGATGTCCCAGGTCAAGTCCAGGTCTATGAACTCCAGCCCAGCAACCTTGAAGCAGATCAGCCA

CircID chr10:119677001|119677114
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MNRKPLMSQVKSRSMNSSPATLKQIS
Nucleotide Sequence TTGAACAGAAAGCCATTGATGTCCCAGGTCAAGTCCAGGTCTATGAACTCCAGCCCAGCAACCTTGAAGCAGATCAGC

CircID chr10:119677001|119677114
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MICFKVAGLEFIDLDLTWDINGFLFKFFQDGLNLPDT
Nucleotide Sequence CTGATCTGCTTCAAGGTTGCTGGGCTGGAGTTCATAGACCTGGACTTGACCTGGGACATCAATGGCTTTCTGTTCAAGTTTTTCCAAGATGGTCTGAACCTTCCTGACACC

CircID chr10:119677001|119677114
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MLQGCWAGVHRPGLDLGHQWLSVQVFPRWSEPS
Nucleotide Sequence CTGCTTCAAGGTTGCTGGGCTGGAGTTCATAGACCTGGACTTGACCTGGGACATCAATGGCTTTCTGTTCAAGTTTTTCCAAGATGGTCTGAACCTTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites