CircNet

General Information

circRNA Basic Information

CircID	chr10:11999906\|12014184
Strand	-
CircType	exon
Host Gene	ENSG00000151461.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCGCATTCTACATTCTAAAGGGGAGCTCAGTGAAGATAGACATAAACAGTATGAGGAATTTGCTATGTCTTACCAGAAGCTGCTGGCAAATTCTCAATCCTTAGCAGACCTTTTGGATGAAAATATGCCAGATCTTCCTCAAGACAAACCAACACCAGAAGAGGCAAAAGAATCTAAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGGAACTTGAGTTGGAGAATCTAGAAATTAATGATGACACCTTAGAATTAGAGGGTGGAGATGAAGCTGAAGATCTTACAAAGAAACTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGTAGATGCTTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGATCTGATAGACAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:11999906\|12014184	hsa-miR-143-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:11999906\|12014184
ORF Type	ORF1
Protein Length	117
Nucleotide Length	351
Protein Sequence	MSYQKLLANSQSLADLLDENMPDLPQDKPTPEEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDK
Nucleotide Sequence	ATGTCTTACCAGAAGCTGCTGGCAAATTCTCAATCCTTAGCAGACCTTTTGGATGAAAATATGCCAGATCTTCCTCAAGACAAACCAACACCAGAAGAGGCAAAAGAATCTAAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGGAACTTGAGTTGGAGAATCTAGAAATTAATGATGACACCTTAGAATTAGAGGGTGGAGATGAAGCTGAAGATCTTACAAAGAAACTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCCAGCACTGGATCTCATCTCAAGCTCATAGTAGATGCTTTCCTACAGCAGTTACCCAACTGTGTCAACCGAGATCTGATAGACAAG

CircID	chr10:11999906\|12014184
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MKICQIFLKTNQHQKRQKNLRRIRRYQVPMIWNLSWRI*
Nucleotide Sequence	ATGAAAATATGCCAGATCTTCCTCAAGACAAACCAACACCAGAAGAGGCAAAAGAATCTAAGGAGAATAAGGAGGTATCAAGTCCCGATGATTTGGAACTTGAGTTGGAGAATCTAG

CircID	chr10:11999906\|12014184
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRSSAGFLIFLFLFIKKFLCKIFSFISTL*
Nucleotide Sequence	ATGAGATCCAGTGCTGGCTTCCTCATCTTCTTGTTCTTGTTCATCAAGAAGTTTCTTTGTAAGATCTTCAGCTTCATCTCCACCCTCTAA

CircID	chr10:11999906\|12014184
ORF Type	ORF4
Protein Length	30
Nucleotide Length	90
Protein Sequence	MKLKILQRNFLMNKNKKMRKPALDLISSS*
Nucleotide Sequence	ATGAAGCTGAAGATCTTACAAAGAAACTTCTTGATGAACAAGAACAAGAAGATGAGGAAGCCAGCACTGGATCTCATCTCAAGCTCATAG

CircID	chr10:11999906\|12014184
ORF Type	ORF5
Protein Length	66
Nucleotide Length	198
Protein Sequence	VLASSSSCSCSSRSFFVRSSASSPPSNSKVSSLISRFSNSSSKSSGLDTSLFSLDSFASSGVGLS*
Nucleotide Sequence	GTGCTGGCTTCCTCATCTTCTTGTTCTTGTTCATCAAGAAGTTTCTTTGTAAGATCTTCAGCTTCATCTCCACCCTCTAATTCTAAGGTGTCATCATTAATTTCTAGATTCTCCAACTCAAGTTCCAAATCATCGGGACTTGATACCTCCTTATTCTCCTTAGATTCTTTTGCCTCTTCTGGTGTTGGTTTGTCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:11999906\|12014184	MOV10	3	0	0
chr10:11999906\|12014184	ELAVL1	5	3	1
chr10:11999906\|12014184	PRPF8	0	1	1
chr10:11999906\|12014184	SRSF10	0	1	1
chr10:11999906\|12014184	NOP58	1	0	9
chr10:11999906\|12014184	U2AF2	10	4	2
chr10:11999906\|12014184	DDX54	0	0	16
chr10:11999906\|12014184	RBM10	1	1	0
chr10:11999906\|12014184	HNRNPM	8	0	0
chr10:11999906\|12014184	PTBP1	0	1	0
chr10:11999906\|12014184	HNRNPC	0	9	0
chr10:11999906\|12014184	ACIN1	1	0	4
chr10:11999906\|12014184	FXR1	0	0	1
chr10:11999906\|12014184	FXR2	0	1	1
chr10:11999906\|12014184	IGF2BP1	0	1	1
chr10:11999906\|12014184	IGF2BP3	0	1	0
chr10:11999906\|12014184	IGF2BP2	1	1	9
chr10:11999906\|12014184	TARDBP	2	0	0
chr10:11999906\|12014184	BUD13	0	0	1
chr10:11999906\|12014184	RBM47	1	0	2
chr10:11999906\|12014184	CSTF2T	0	1	3
chr10:11999906\|12014184	TIA1	0	1	0
chr10:11999906\|12014184	EIF4A3	1	2	6
chr10:11999906\|12014184	FBL	0	0	6

CircRNA Information