CircRNA Information

General Information
circRNA Basic Information
CircID chr10:12247413|12247627
Strand -
CircType exon
Host Gene ENSG00000228302.2;
Algorism CIRI2;
Sequence CTCCCACTCCGGACACTGTGTCCTCCTCTCTCACCTCCCCCTCAGGACACCGTGTCCCCCTCTCTCACCTCCCCCTCAGGACACTGTGTCCTCCTCTCTTACCTCCCCCTCAGGACACTGTGTCCTCCTCCTCTTTCTCCAGATGCCCTCTGCTCTTTTTGCAATTCTTCCTCTCTATCAACTCTGTCCATCCGGATTTAGTCATGCTCAGATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:12247413|12247627 hsa-miR-527 0 0 1
chr10:12247413|12247627 hsa-miR-583 0 0 1
chr10:12247413|12247627 hsa-miR-605-5p 0 0 1
chr10:12247413|12247627 hsa-miR-605-3p 0 0 1
chr10:12247413|12247627 hsa-miR-765 1 0 1
chr10:12247413|12247627 hsa-miR-1200 0 0 1
chr10:12247413|12247627 hsa-miR-1203 0 0 1
chr10:12247413|12247627 hsa-miR-1276 0 0 1
chr10:12247413|12247627 hsa-miR-1197 0 1 1
chr10:12247413|12247627 hsa-miR-423-5p 1 0 1
chr10:12247413|12247627 hsa-miR-518a-5p 0 0 1
chr10:12247413|12247627 hsa-miR-128 0 0 1
chr10:12247413|12247627 hsa-miR-516b 0 0 1
chr10:12247413|12247627 hsa-miR-219-1-3p 0 0 1
chr10:12247413|12247627 hsa-miR-198 1 0 0
chr10:12247413|12247627 hsa-miR-184 1 0 0
chr10:12247413|12247627 hsa-miR-608 1 0 0
chr10:12247413|12247627 hsa-miR-658 1 0 0
chr10:12247413|12247627 hsa-miR-151b 0 1 0
chr10:12247413|12247627 hsa-miR-936 1 0 0
chr10:12247413|12247627 hsa-miR-2278 0 1 0
chr10:12247413|12247627 hsa-miR-3125 1 1 0
chr10:12247413|12247627 hsa-miR-3132 1 0 0
chr10:12247413|12247627 hsa-miR-3138 1 1 0
chr10:12247413|12247627 hsa-miR-3141 1 0 0
chr10:12247413|12247627 hsa-miR-3147 1 0 0
chr10:12247413|12247627 hsa-miR-3175 1 0 0
chr10:12247413|12247627 hsa-miR-4257 1 0 0
chr10:12247413|12247627 hsa-miR-3612 1 0 0
chr10:12247413|12247627 hsa-miR-3916 0 1 0
chr10:12247413|12247627 hsa-miR-3945 1 0 0
chr10:12247413|12247627 hsa-miR-4441 1 0 0
chr10:12247413|12247627 hsa-miR-4450 1 0 0
chr10:12247413|12247627 hsa-miR-4462 1 1 0
chr10:12247413|12247627 hsa-miR-3689c 1 0 0
chr10:12247413|12247627 hsa-miR-4510 0 1 0
chr10:12247413|12247627 hsa-miR-4534 1 0 0
chr10:12247413|12247627 hsa-miR-4644 1 1 0
chr10:12247413|12247627 hsa-miR-4651 1 0 0
chr10:12247413|12247627 hsa-miR-4656 1 0 0
chr10:12247413|12247627 hsa-miR-4669 1 1 0
chr10:12247413|12247627 hsa-miR-4688 1 0 0
chr10:12247413|12247627 hsa-miR-4689 0 1 0
chr10:12247413|12247627 hsa-miR-4706 1 0 0
chr10:12247413|12247627 hsa-miR-4710 0 1 0
chr10:12247413|12247627 hsa-miR-4721 1 0 0
chr10:12247413|12247627 hsa-miR-4739 1 1 0
chr10:12247413|12247627 hsa-miR-4779 0 1 0
chr10:12247413|12247627 hsa-miR-5191 1 0 0
chr10:12247413|12247627 hsa-miR-5194 1 0 0
chr10:12247413|12247627 hsa-miR-5698 1 1 0
chr10:12247413|12247627 hsa-miR-6088 1 0 0
chr10:12247413|12247627 hsa-miR-6124 1 0 0
chr10:12247413|12247627 hsa-miR-6127 1 0 0
chr10:12247413|12247627 hsa-miR-6133 1 0 0
chr10:12247413|12247627 hsa-miR-6165 1 0 0
chr10:12247413|12247627 hsa-miR-6745 1 0 0
chr10:12247413|12247627 hsa-miR-6860 1 0 0
chr10:12247413|12247627 hsa-miR-8072 1 0 0
chr10:12247413|12247627 hsa-miR-8080 1 1 0
chr10:12247413|12247627 hsa-miR-8085 1 0 0
chr10:12247413|12247627 hsa-miR-8089 1 1 0
chr10:12247413|12247627 hsa-miR-12114 1 1 0
chr10:12247413|12247627 hsa-miR-12119 1 1 0
chr10:12247413|12247627 hsa-miR-6734-5p 1 1 0
chr10:12247413|12247627 hsa-miR-4731-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6765-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7106-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6825-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6894-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6799-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6510-5p 1 0 0
chr10:12247413|12247627 hsa-miR-8071 1 0 0
chr10:12247413|12247627 hsa-miR-6873-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6880-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7847-3p 1 1 0
chr10:12247413|12247627 hsa-miR-4695-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6746-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7154-3p 1 1 0
chr10:12247413|12247627 hsa-miR-4761-3p 1 0 0
chr10:12247413|12247627 hsa-miR-197-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3180-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6732-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6805-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6798-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6760-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6881-5p 0 1 0
chr10:12247413|12247627 hsa-miR-2467-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6782-5p 1 0 0
chr10:12247413|12247627 hsa-miR-5088-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7109-5p 1 0 0
chr10:12247413|12247627 hsa-miR-1226-5p 1 0 0
chr10:12247413|12247627 hsa-miR-185-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6771-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6823-5p 1 1 0
chr10:12247413|12247627 hsa-miR-877-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4732-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6847-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7854-3p 1 1 0
chr10:12247413|12247627 hsa-miR-4743-5p 1 0 0
chr10:12247413|12247627 hsa-miR-149-3p 1 0 0
chr10:12247413|12247627 hsa-miR-3616-3p 1 1 0
chr10:12247413|12247627 hsa-miR-6824-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3162-5p 1 0 0
chr10:12247413|12247627 hsa-miR-516b-5p 0 1 0
chr10:12247413|12247627 hsa-miR-4800-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7846-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6832-5p 1 1 0
chr10:12247413|12247627 hsa-miR-216a-3p 0 1 0
chr10:12247413|12247627 hsa-miR-483-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4766-5p 1 0 0
chr10:12247413|12247627 hsa-miR-219a-2-3p 1 0 0
chr10:12247413|12247627 hsa-miR-1298-3p 0 1 0
chr10:12247413|12247627 hsa-miR-6733-3p 0 1 0
chr10:12247413|12247627 hsa-miR-1233-5p 1 1 0
chr10:12247413|12247627 hsa-miR-3689b-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6769b-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6778-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6812-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6816-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6865-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6870-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6775-5p 1 0 0
chr10:12247413|12247627 hsa-miR-1343-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3180 1 0 0
chr10:12247413|12247627 hsa-miR-6743-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6752-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6754-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6756-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6803-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6819-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6851-5p 1 1 0
chr10:12247413|12247627 hsa-miR-7110-5p 1 1 0
chr10:12247413|12247627 hsa-miR-11181-3p 1 1 0
chr10:12247413|12247627 hsa-miR-1249-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6722-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6751-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6780a-5p 0 1 0
chr10:12247413|12247627 hsa-miR-6797-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6879-5p 1 0 0
chr10:12247413|12247627 hsa-miR-7111-5p 1 1 0
chr10:12247413|12247627 hsa-miR-4728-5p 1 0 0
chr10:12247413|12247627 hsa-miR-5189-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6780b-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6862-5p 1 0 0
chr10:12247413|12247627 hsa-miR-10526-3p 1 0 0
chr10:12247413|12247627 hsa-miR-328-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3689a-3p 1 0 0
chr10:12247413|12247627 hsa-miR-4632-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4649-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4725-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6735-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6738-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6794-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6795-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6848-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6858-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6887-5p 1 1 0
chr10:12247413|12247627 hsa-miR-4436b-3p 1 0 0
chr10:12247413|12247627 hsa-miR-4723-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6831-5p 1 0 0
chr10:12247413|12247627 hsa-miR-939-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4758-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6731-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6758-5p 1 1 0
chr10:12247413|12247627 hsa-miR-6856-5p 1 1 0
chr10:12247413|12247627 hsa-miR-7843-5p 1 0 0
chr10:12247413|12247627 hsa-miR-1914-3p 1 0 0
chr10:12247413|12247627 hsa-miR-4665-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4700-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3679-5p 1 0 0
chr10:12247413|12247627 hsa-miR-6891-5p 1 0 0
chr10:12247413|12247627 hsa-miR-4716-3p 1 1 0
chr10:12247413|12247627 hsa-miR-541-3p 1 0 0
chr10:12247413|12247627 hsa-miR-6785-5p 1 0 0
chr10:12247413|12247627 hsa-miR-3689d 0 1 0
chr10:12247413|12247627 hsa-miR-6529-5p 1 0 0
chr10:12247413|12247627 hsa-miR-151a-5p 0 1 0
chr10:12247413|12247627 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:12247413|12247627
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MCPPLSPPPQDTVSPSLTSPSGHCVLLSYLPLRTLCPPPLSPDALCSFCNSSSLSTLSIRI
Nucleotide Sequence CTGTGTCCTCCTCTCTCACCTCCCCCTCAGGACACCGTGTCCCCCTCTCTCACCTCCCCCTCAGGACACTGTGTCCTCCTCTCTTACCTCCCCCTCAGGACACTGTGTCCTCCTCCTCTTTCTCCAGATGCCCTCTGCTCTTTTTGCAATTCTTCCTCTCTATCAACTCTGTCCATCCGGATTTAG
CircID chr10:12247413|12247627
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MCPPLLPPPQDTVSSSSFSRCPLLFLQFFLSINSVHPDLVMLRY
Nucleotide Sequence CTGTGTCCTCCTCTCTTACCTCCCCCTCAGGACACTGTGTCCTCCTCCTCTTTCTCCAGATGCCCTCTGCTCTTTTTGCAATTCTTCCTCTCTATCAACTCTGTCCATCCGGATTTAGTCATGCTCAGATAC
CircID chr10:12247413|12247627
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MDRVDREEELQKEQRASGERGGGHSVLRGR
Nucleotide Sequence ATGGACAGAGTTGATAGAGAGGAAGAATTGCAAAAAGAGCAGAGGGCATCTGGAGAAAGAGGAGGAGGACACAGTGTCCTGAGGGGGAGGTAA
CircID chr10:12247413|12247627
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MSMTKSGWTELIERKNCKKSRGHLEKEEEDTVS
Nucleotide Sequence CTGAGCATGACTAAATCCGGATGGACAGAGTTGATAGAGAGGAAGAATTGCAAAAAGAGCAGAGGGCATCTGGAGAAAGAGGAGGAGGACACAGTGTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab