CircRNA Information

General Information
circRNA Basic Information
CircID chr10:123746597|123746935
Strand +
CircType exon
Host Gene ENSG00000121898.11;
Algorism CIRI2;
Sequence CAAGAACTGTATGGTTGGCTATGACATGGGGGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGAAGCTGCGGGGGCAGAAGAGACGACAGCGTGGGTGACCCTCCTGGGCCCTTGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTCACTCACTGTTGTTTCCTCTGTAATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAAGGCTGGAGGCTGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:123746597|123746935 hsa-miR-204-5p 0 0 1
chr10:123746597|123746935 hsa-miR-204-3p 0 0 1
chr10:123746597|123746935 hsa-miR-211-5p 0 0 1
chr10:123746597|123746935 hsa-miR-211-3p 0 0 1
chr10:123746597|123746935 hsa-miR-224-5p 0 0 1
chr10:123746597|123746935 hsa-miR-224-3p 0 0 1
chr10:123746597|123746935 hsa-miR-136-5p 0 0 1
chr10:123746597|123746935 hsa-miR-136-3p 0 0 1
chr10:123746597|123746935 hsa-miR-492 0 0 1
chr10:123746597|123746935 hsa-miR-526b-5p 0 0 1
chr10:123746597|123746935 hsa-miR-526b-3p 0 0 1
chr10:123746597|123746935 hsa-miR-595 0 0 1
chr10:123746597|123746935 hsa-miR-623 0 0 1
chr10:123746597|123746935 hsa-miR-766-5p 0 0 1
chr10:123746597|123746935 hsa-miR-766-3p 0 0 1
chr10:123746597|123746935 hsa-miR-665 0 0 1
chr10:123746597|123746935 hsa-miR-1228-5p 0 0 1
chr10:123746597|123746935 hsa-miR-1228-3p 0 0 1
chr10:123746597|123746935 hsa-miR-1236-5p 0 0 1
chr10:123746597|123746935 hsa-miR-1236-3p 0 0 1
chr10:123746597|123746935 hsa-miR-663b 0 0 1
chr10:123746597|123746935 hsa-miR-513c-5p 0 0 1
chr10:123746597|123746935 hsa-miR-513c-3p 0 0 1
chr10:123746597|123746935 hsa-miR-127-3p 0 0 1
chr10:123746597|123746935 hsa-miR-582-5p 0 0 1
chr10:123746597|123746935 hsa-miR-299-5p 0 0 1
chr10:123746597|123746935 hsa-miR-1207-5p 0 0 1
chr10:123746597|123746935 hsa-miR-324-3p 0 0 1
chr10:123746597|123746935 hsa-miR-1302 0 0 1
chr10:123746597|123746935 hsa-miR-502-3p 0 0 1
chr10:123746597|123746935 hsa-miR-501-3p 0 0 1
chr10:123746597|123746935 hsa-miR-515-5p 0 0 1
chr10:123746597|123746935 hsa-miR-516a-3p 0 0 1
chr10:123746597|123746935 hsa-miR-1308 0 0 1
chr10:123746597|123746935 hsa-miR-768-3p 0 0 1
chr10:123746597|123746935 hsa-miR-220a 0 0 1
chr10:123746597|123746935 hsa-miR-661 1 0 0
chr10:123746597|123746935 hsa-miR-662 1 0 0
chr10:123746597|123746935 hsa-miR-4489 1 0 0
chr10:123746597|123746935 hsa-miR-5092 1 0 0
chr10:123746597|123746935 hsa-miR-9901 1 0 0
chr10:123746597|123746935 hsa-miR-6879-3p 1 0 0
chr10:123746597|123746935 hsa-miR-187-5p 1 0 0
chr10:123746597|123746935 hsa-miR-3622a-5p 1 0 0
chr10:123746597|123746935 hsa-miR-7114-5p 1 0 0
chr10:123746597|123746935 hsa-miR-4653-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6762-3p 1 0 0
chr10:123746597|123746935 hsa-miR-942-5p 1 0 0
chr10:123746597|123746935 hsa-miR-6874-5p 1 0 0
chr10:123746597|123746935 hsa-miR-6821-5p 1 0 0
chr10:123746597|123746935 hsa-miR-6716-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6859-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6761-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6722-3p 1 0 0
chr10:123746597|123746935 hsa-miR-320a-5p 1 0 0
chr10:123746597|123746935 hsa-miR-939-5p 1 0 0
chr10:123746597|123746935 hsa-miR-4758-5p 1 0 0
chr10:123746597|123746935 hsa-miR-4633-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6750-5p 1 0 0
chr10:123746597|123746935 hsa-miR-5591-5p 1 0 0
chr10:123746597|123746935 hsa-miR-6862-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6848-3p 1 0 0
chr10:123746597|123746935 hsa-miR-6500-5p 1 0 0
chr10:123746597|123746935 hsa-miR-6827-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:123746597|123746935
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MVGYDMGATRCDFTLSKTNMARIREIMEKFGKQPVSLPARRLKLRGQKRRQRG
Nucleotide Sequence ATGGTTGGCTATGACATGGGGGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGAAGCTGCGGGGGCAGAAGAGACGACAGCGTGGGTGA

CircID chr10:123746597|123746935
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MAMTWGPQGVTSHLAKPTWPGSERSWRSLGSSPSACQPGG
Nucleotide Sequence TTGGCTATGACATGGGGGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGA

CircID chr10:123746597|123746935
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MRLVWDPCKLNQPGSSSIVDSLTVVSSVIQEVPGREGAL
Nucleotide Sequence TTGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTCACTCACTGTTGTTTCCTCTGTAATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGA

CircID chr10:123746597|123746935
ORF Type ORF4
Protein Length 62
Nucleotide Length 189
Protein Sequence MGPRRVSRAQEGHPRCRLFCPRSFSRLAGRLTGCFPNFSMISRILAMLVLLSVKSHLVAPMS
Nucleotide Sequence ATGGGTCCCAGACGAGTCTCAAGGGCCCAGGAGGGTCACCCACGCTGTCGTCTCTTCTGCCCCCGCAGCTTCAGCCGCCTGGCTGGCAGGCTGACGGGCTGCTTCCCAAACTTCTCCATGATCTCTCGGATCCTGGCCATGTTGGTTTTGCTAAGTGTGAAGTCACACCTTGTGGCCCCCATGTCATAG

CircID chr10:123746597|123746935
ORF Type ORF5
Protein Length 79
Nucleotide Length 237
Protein Sequence MELLPGWFNLHGSQTSLKGPGGSPTLSSLLPPQLQPPGWQADGLLPKLLHDLSDPGHVGFAKCEVTPCGPHVIANHTVL
Nucleotide Sequence ATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCAAGGGCCCAGGAGGGTCACCCACGCTGTCGTCTCTTCTGCCCCCGCAGCTTCAGCCGCCTGGCTGGCAGGCTGACGGGCTGCTTCCCAAACTTCTCCATGATCTCTCGGATCCTGGCCATGTTGGTTTTGCTAAGTGTGAAGTCACACCTTGTGGCCCCCATGTCATAGCCAACCATACAGTTCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites