CircRNA Information

General Information
circRNA Basic Information
CircID chr10:124997630|124997778
Strand -
CircType exon
Host Gene ENSG00000273599.1;
Algorism CIRI2;
Sequence CTCCATACAGCCCCTGCCCTTCACCCCTGCCCAGGGAAATTTACTGGGCACAGCGCCTTGCCCGCTGCCCCACAGCAAAGAATGCTGTCCTGCCAGACACTACAGACAGCAGTGGACACGCATTCTTCCAGAACCAGCCCAGATCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:124997630|124997778 hsa-miR-612 1 1 1
chr10:124997630|124997778 hsa-miR-626 0 1 1
chr10:124997630|124997778 hsa-miR-1179 0 0 1
chr10:124997630|124997778 hsa-miR-1231 1 1 1
chr10:124997630|124997778 hsa-miR-1286 0 0 1
chr10:124997630|124997778 hsa-miR-1299 0 1 1
chr10:124997630|124997778 hsa-miR-491-5p 0 0 1
chr10:124997630|124997778 hsa-miR-486-3p 0 0 1
chr10:124997630|124997778 hsa-miR-885-3p 0 1 1
chr10:124997630|124997778 hsa-miR-875-3p 0 0 1
chr10:124997630|124997778 hsa-miR-1207-5p 1 1 1
chr10:124997630|124997778 hsa-miR-513a-3p 0 0 1
chr10:124997630|124997778 hsa-miR-524-3p 0 1 1
chr10:124997630|124997778 hsa-miR-525-3p 0 1 1
chr10:124997630|124997778 hsa-miR-142-3p 0 0 1
chr10:124997630|124997778 hsa-miR-1274a 0 0 1
chr10:124997630|124997778 hsa-miR-7 0 0 1
chr10:124997630|124997778 hsa-miR-1285 0 0 1
chr10:124997630|124997778 hsa-miR-516b 0 0 1
chr10:124997630|124997778 hsa-miR-601 1 0 0
chr10:124997630|124997778 hsa-miR-608 1 0 0
chr10:124997630|124997778 hsa-miR-645 1 0 0
chr10:124997630|124997778 hsa-miR-762 1 0 0
chr10:124997630|124997778 hsa-miR-760 1 0 0
chr10:124997630|124997778 hsa-miR-1182 1 0 0
chr10:124997630|124997778 hsa-miR-1268a 1 0 0
chr10:124997630|124997778 hsa-miR-3132 1 0 0
chr10:124997630|124997778 hsa-miR-3141 1 0 0
chr10:124997630|124997778 hsa-miR-3147 1 0 0
chr10:124997630|124997778 hsa-miR-4322 1 0 0
chr10:124997630|124997778 hsa-miR-4292 0 1 0
chr10:124997630|124997778 hsa-miR-3660 0 1 0
chr10:124997630|124997778 hsa-miR-3936 1 0 0
chr10:124997630|124997778 hsa-miR-1268b 1 0 0
chr10:124997630|124997778 hsa-miR-4440 1 0 0
chr10:124997630|124997778 hsa-miR-4466 1 0 0
chr10:124997630|124997778 hsa-miR-4498 1 1 0
chr10:124997630|124997778 hsa-miR-4505 1 0 0
chr10:124997630|124997778 hsa-miR-4507 1 0 0
chr10:124997630|124997778 hsa-miR-4516 1 0 0
chr10:124997630|124997778 hsa-miR-1587 1 1 0
chr10:124997630|124997778 hsa-miR-4651 1 0 0
chr10:124997630|124997778 hsa-miR-4656 1 0 0
chr10:124997630|124997778 hsa-miR-4688 1 0 0
chr10:124997630|124997778 hsa-miR-4710 1 0 0
chr10:124997630|124997778 hsa-miR-4741 1 1 0
chr10:124997630|124997778 hsa-miR-5090 1 0 0
chr10:124997630|124997778 hsa-miR-5572 1 0 0
chr10:124997630|124997778 hsa-miR-5787 1 0 0
chr10:124997630|124997778 hsa-miR-6085 0 1 0
chr10:124997630|124997778 hsa-miR-6860 1 1 0
chr10:124997630|124997778 hsa-miR-7150 1 1 0
chr10:124997630|124997778 hsa-miR-12114 1 0 0
chr10:124997630|124997778 hsa-miR-6734-5p 1 0 0
chr10:124997630|124997778 hsa-miR-504-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6747-5p 1 0 0
chr10:124997630|124997778 hsa-miR-4433a-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6861-5p 1 0 0
chr10:124997630|124997778 hsa-miR-7106-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6880-5p 1 0 0
chr10:124997630|124997778 hsa-miR-7847-3p 1 0 0
chr10:124997630|124997778 hsa-miR-4722-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6727-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6842-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6721-5p 1 1 0
chr10:124997630|124997778 hsa-miR-197-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6742-5p 1 0 0
chr10:124997630|124997778 hsa-miR-3151-5p 1 1 0
chr10:124997630|124997778 hsa-miR-659-3p 0 1 0
chr10:124997630|124997778 hsa-miR-3180-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6772-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6796-5p 1 1 0
chr10:124997630|124997778 hsa-miR-185-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6732-5p 1 0 0
chr10:124997630|124997778 hsa-miR-3190-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6798-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6782-5p 1 1 0
chr10:124997630|124997778 hsa-miR-6774-3p 0 1 0
chr10:124997630|124997778 hsa-miR-6786-5p 1 0 0
chr10:124997630|124997778 hsa-miR-1226-5p 1 0 0
chr10:124997630|124997778 hsa-miR-3944-3p 1 0 0
chr10:124997630|124997778 hsa-miR-1229-5p 1 1 0
chr10:124997630|124997778 hsa-miR-30c-2-3p 0 1 0
chr10:124997630|124997778 hsa-miR-1228-5p 1 0 0
chr10:124997630|124997778 hsa-miR-296-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6823-5p 1 0 0
chr10:124997630|124997778 hsa-miR-889-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6834-5p 1 0 0
chr10:124997630|124997778 hsa-miR-4787-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6824-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6789-5p 1 0 0
chr10:124997630|124997778 hsa-miR-3189-3p 1 0 0
chr10:124997630|124997778 hsa-miR-7112-5p 1 1 0
chr10:124997630|124997778 hsa-miR-423-5p 1 0 0
chr10:124997630|124997778 hsa-miR-3120-5p 0 1 0
chr10:124997630|124997778 hsa-miR-6889-3p 0 1 0
chr10:124997630|124997778 hsa-miR-744-5p 1 0 0
chr10:124997630|124997778 hsa-miR-20b-3p 0 1 0
chr10:124997630|124997778 hsa-miR-10400-5p 1 0 0
chr10:124997630|124997778 hsa-miR-4763-3p 1 1 0
chr10:124997630|124997778 hsa-miR-6787-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6812-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6816-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6870-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6893-5p 0 1 0
chr10:124997630|124997778 hsa-miR-6775-5p 0 1 0
chr10:124997630|124997778 hsa-miR-1343-5p 1 0 0
chr10:124997630|124997778 hsa-miR-5001-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6726-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6743-5p 1 1 0
chr10:124997630|124997778 hsa-miR-6752-5p 1 1 0
chr10:124997630|124997778 hsa-miR-6813-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6819-5p 0 1 0
chr10:124997630|124997778 hsa-miR-7110-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6722-3p 1 1 0
chr10:124997630|124997778 hsa-miR-6774-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6779-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6797-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6808-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6879-5p 1 1 0
chr10:124997630|124997778 hsa-miR-3620-5p 1 1 0
chr10:124997630|124997778 hsa-miR-4728-5p 1 0 0
chr10:124997630|124997778 hsa-miR-5189-5p 1 1 0
chr10:124997630|124997778 hsa-miR-5196-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6780b-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6836-5p 1 0 0
chr10:124997630|124997778 hsa-miR-10396b-5p 1 0 0
chr10:124997630|124997778 hsa-miR-1237-5p 1 0 0
chr10:124997630|124997778 hsa-miR-1909-3p 1 1 0
chr10:124997630|124997778 hsa-miR-328-5p 1 0 0
chr10:124997630|124997778 hsa-miR-4632-5p 1 1 0
chr10:124997630|124997778 hsa-miR-4649-5p 1 0 0
chr10:124997630|124997778 hsa-miR-4725-3p 1 0 0
chr10:124997630|124997778 hsa-miR-6729-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6735-5p 0 1 0
chr10:124997630|124997778 hsa-miR-6795-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6846-5p 0 1 0
chr10:124997630|124997778 hsa-miR-3187-5p 1 1 0
chr10:124997630|124997778 hsa-miR-4436b-3p 1 0 0
chr10:124997630|124997778 hsa-miR-3940-5p 1 0 0
chr10:124997630|124997778 hsa-miR-30c-1-3p 0 1 0
chr10:124997630|124997778 hsa-miR-6785-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6791-5p 1 1 0
chr10:124997630|124997778 hsa-miR-330-5p 1 0 0
chr10:124997630|124997778 hsa-miR-6876-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:124997630|124997778
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPAAPQQRMLSCQTLQTAVDTHSSRTSPDP
Nucleotide Sequence TTGCCCGCTGCCCCACAGCAAAGAATGCTGTCCTGCCAGACACTACAGACAGCAGTGGACACGCATTCTTCCAGAACCAGCCCAGATCCT
CircID chr10:124997630|124997778
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MPFTPAQGNLLGTAPCPLPHSKECCPARHYRQQWTRILPEPAQIL
Nucleotide Sequence CTGCCCTTCACCCCTGCCCAGGGAAATTTACTGGGCACAGCGCCTTGCCCGCTGCCCCACAGCAAAGAATGCTGTCCTGCCAGACACTACAGACAGCAGTGGACACGCATTCTTCCAGAACCAGCCCAGATCCTG
CircID chr10:124997630|124997778
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MPREIYWAQRLARCPTAKNAVLPDTTDSSGHAFFQNQPRSC
Nucleotide Sequence CTGCCCAGGGAAATTTACTGGGCACAGCGCCTTGCCCGCTGCCCCACAGCAAAGAATGCTGTCCTGCCAGACACTACAGACAGCAGTGGACACGCATTCTTCCAGAACCAGCCCAGATCCTGC
CircID chr10:124997630|124997778
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MVLEECVSTAVCSVWQDSILCCGAAGKALCPVNFPGQG
Nucleotide Sequence CTGGTTCTGGAAGAATGCGTGTCCACTGCTGTCTGTAGTGTCTGGCAGGACAGCATTCTTTGCTGTGGGGCAGCGGGCAAGGCGCTGTGCCCAGTAAATTTCCCTGGGCAGGGGTGA
CircID chr10:124997630|124997778
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MGWFWKNACPLLSVVSGRTAFFAVGQRARRCAQ
Nucleotide Sequence CTGGGCTGGTTCTGGAAGAATGCGTGTCCACTGCTGTCTGTAGTGTCTGGCAGGACAGCATTCTTTGCTGTGGGGCAGCGGGCAAGGCGCTGTGCCCAGTAA
CircID chr10:124997630|124997778
ORF Type ORF6
Protein Length 32
Nucleotide Length 96
Protein Sequence MAGQHSLLWGSGQGAVPSKFPWAGVKGRGCME
Nucleotide Sequence CTGGCAGGACAGCATTCTTTGCTGTGGGGCAGCGGGCAAGGCGCTGTGCCCAGTAAATTTCCCTGGGCAGGGGTGAAGGGCAGGGGCTGTATGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab