CircRNA Information

General Information
circRNA Basic Information
CircID chr10:128098953|128099092
Strand -
CircType exon
Host Gene ENSG00000148773.11;
Algorism CIRI2;
Sequence CTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGAGTTTATGAAGCCGATTCAGACCCAGCAAATCCAAAGTTTTCTTCCCTTAAGCAGACTGACAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:128098953|128099092 hsa-miR-223-5p 0 0 1
chr10:128098953|128099092 hsa-miR-223-3p 0 0 1
chr10:128098953|128099092 hsa-miR-422a 0 1 1
chr10:128098953|128099092 hsa-miR-580-5p 0 0 1
chr10:128098953|128099092 hsa-miR-580-3p 0 0 1
chr10:128098953|128099092 hsa-miR-612 0 0 1
chr10:128098953|128099092 hsa-miR-622 1 1 1
chr10:128098953|128099092 hsa-miR-758-5p 0 0 1
chr10:128098953|128099092 hsa-miR-758-3p 0 0 1
chr10:128098953|128099092 hsa-miR-920 0 0 1
chr10:128098953|128099092 hsa-miR-1290 0 0 1
chr10:128098953|128099092 hsa-miR-1288-5p 0 0 1
chr10:128098953|128099092 hsa-miR-1288-3p 0 0 1
chr10:128098953|128099092 hsa-miR-1252-5p 0 0 1
chr10:128098953|128099092 hsa-miR-1252-3p 0 0 1
chr10:128098953|128099092 hsa-miR-193a-5p 0 0 1
chr10:128098953|128099092 hsa-miR-876-5p 0 0 1
chr10:128098953|128099092 hsa-miR-378 0 0 1
chr10:128098953|128099092 hsa-miR-1269 0 0 1
chr10:128098953|128099092 hsa-miR-1285 0 0 1
chr10:128098953|128099092 hsa-miR-637 1 1 0
chr10:128098953|128099092 hsa-miR-760 1 0 0
chr10:128098953|128099092 hsa-miR-1269a 0 1 0
chr10:128098953|128099092 hsa-miR-3185 1 0 0
chr10:128098953|128099092 hsa-miR-3188 1 0 0
chr10:128098953|128099092 hsa-miR-378c 0 1 0
chr10:128098953|128099092 hsa-miR-4259 1 0 0
chr10:128098953|128099092 hsa-miR-4271 1 0 0
chr10:128098953|128099092 hsa-miR-3916 1 0 0
chr10:128098953|128099092 hsa-miR-378e 0 1 0
chr10:128098953|128099092 hsa-miR-378g 0 1 0
chr10:128098953|128099092 hsa-miR-4505 1 0 0
chr10:128098953|128099092 hsa-miR-4507 1 0 0
chr10:128098953|128099092 hsa-miR-1269b 0 1 0
chr10:128098953|128099092 hsa-miR-378i 0 1 0
chr10:128098953|128099092 hsa-miR-1587 1 0 0
chr10:128098953|128099092 hsa-miR-4656 1 0 0
chr10:128098953|128099092 hsa-miR-4663 1 0 0
chr10:128098953|128099092 hsa-miR-4674 1 0 0
chr10:128098953|128099092 hsa-miR-4689 1 0 0
chr10:128098953|128099092 hsa-miR-4734 1 0 0
chr10:128098953|128099092 hsa-miR-4739 1 0 0
chr10:128098953|128099092 hsa-miR-6090 1 0 0
chr10:128098953|128099092 hsa-miR-8089 1 0 0
chr10:128098953|128099092 hsa-miR-6734-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4731-5p 1 0 0
chr10:128098953|128099092 hsa-miR-7155-5p 1 0 0
chr10:128098953|128099092 hsa-miR-3150a-3p 1 0 0
chr10:128098953|128099092 hsa-miR-6861-5p 1 0 0
chr10:128098953|128099092 hsa-miR-7106-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4687-3p 1 0 0
chr10:128098953|128099092 hsa-miR-3692-5p 0 1 0
chr10:128098953|128099092 hsa-miR-766-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4655-5p 1 0 0
chr10:128098953|128099092 hsa-miR-23b-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6776-5p 1 0 0
chr10:128098953|128099092 hsa-miR-423-3p 1 0 0
chr10:128098953|128099092 hsa-miR-6796-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6829-5p 1 0 0
chr10:128098953|128099092 hsa-miR-23a-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6760-5p 1 0 0
chr10:128098953|128099092 hsa-miR-1226-5p 1 0 0
chr10:128098953|128099092 hsa-miR-193b-5p 0 1 0
chr10:128098953|128099092 hsa-miR-6784-5p 1 0 0
chr10:128098953|128099092 hsa-miR-5004-3p 0 1 0
chr10:128098953|128099092 hsa-miR-6834-5p 1 0 0
chr10:128098953|128099092 hsa-miR-3690 0 1 0
chr10:128098953|128099092 hsa-miR-6824-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6878-5p 1 0 0
chr10:128098953|128099092 hsa-miR-887-5p 0 1 0
chr10:128098953|128099092 hsa-miR-6869-5p 1 0 0
chr10:128098953|128099092 hsa-miR-526b-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6837-3p 0 1 0
chr10:128098953|128099092 hsa-miR-181d-3p 1 1 0
chr10:128098953|128099092 hsa-miR-6787-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6812-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6752-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6754-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6779-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6797-5p 1 0 0
chr10:128098953|128099092 hsa-miR-3620-5p 1 0 0
chr10:128098953|128099092 hsa-miR-5196-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6780b-5p 1 0 0
chr10:128098953|128099092 hsa-miR-10396a-5p 1 0 0
chr10:128098953|128099092 hsa-miR-1237-5p 1 0 0
chr10:128098953|128099092 hsa-miR-328-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4725-3p 1 0 0
chr10:128098953|128099092 hsa-miR-6735-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6846-5p 1 1 0
chr10:128098953|128099092 hsa-miR-6848-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6885-5p 1 0 0
chr10:128098953|128099092 hsa-miR-3940-5p 1 0 0
chr10:128098953|128099092 hsa-miR-6856-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4646-5p 1 0 0
chr10:128098953|128099092 hsa-miR-4747-5p 1 1 0
chr10:128098953|128099092 hsa-miR-378a-3p 0 1 0
chr10:128098953|128099092 hsa-miR-6750-5p 1 0 0
chr10:128098953|128099092 hsa-miR-10400-3p 1 1 0
chr10:128098953|128099092 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:128098953|128099092
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LAQTPSQSPRCSTILSPGAQQCSQWSL
Nucleotide Sequence TTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGAGTTTATGA
CircID chr10:128098953|128099092
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MDLLGLNRLHKLHWEHCWAPGLRIVEHRGLCEGVWAK
Nucleotide Sequence TTGGATTTGCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab