CircRNA Information

General Information
circRNA Basic Information
CircID chr10:128103568|128103851
Strand -
CircType exon
Host Gene ENSG00000148773.11;
Algorism CIRI2;
Sequence CTGCTGGTTCTTTGTCTGCATCCGTGGTTTCCCCTGATGTTTGTGTGAACTTGACTGCTGAAGGCTCTTCTTTTACTTGTACCTTCTGCACACGTGTCCTGAGATGCCTCTTTGTGCTTGCTGTGGTGTCTACCACTTCTAGTGGGGGAGATTCGCAGGGTATTTTAGTGGCTTTGCCAGCAGTCAGTGATTCCTGAGTGTGACCTGATGTTTCAGAGAGCTCTGTGAAGCCGGCCAGGTCTTCCAGGGGTTGGGCCTTTTCCTTAGGTGCTCTTGGCCTTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:128103568|128103851 hsa-miR-27a-5p 0 0 1
chr10:128103568|128103851 hsa-miR-27a-3p 0 0 1
chr10:128103568|128103851 hsa-miR-10a-5p 0 0 1
chr10:128103568|128103851 hsa-miR-10a-3p 0 0 1
chr10:128103568|128103851 hsa-miR-10b-5p 0 0 1
chr10:128103568|128103851 hsa-miR-10b-3p 0 0 1
chr10:128103568|128103851 hsa-miR-214-5p 0 0 1
chr10:128103568|128103851 hsa-miR-214-3p 0 0 1
chr10:128103568|128103851 hsa-miR-27b-5p 0 0 1
chr10:128103568|128103851 hsa-miR-27b-3p 0 0 1
chr10:128103568|128103851 hsa-miR-34b-5p 0 0 1
chr10:128103568|128103851 hsa-miR-34b-3p 0 0 1
chr10:128103568|128103851 hsa-miR-377-5p 0 0 1
chr10:128103568|128103851 hsa-miR-377-3p 0 0 1
chr10:128103568|128103851 hsa-miR-379-5p 0 0 1
chr10:128103568|128103851 hsa-miR-379-3p 0 0 1
chr10:128103568|128103851 hsa-miR-335-5p 0 0 1
chr10:128103568|128103851 hsa-miR-335-3p 0 0 1
chr10:128103568|128103851 hsa-miR-494-5p 0 0 1
chr10:128103568|128103851 hsa-miR-494-3p 0 0 1
chr10:128103568|128103851 hsa-miR-510-5p 0 0 1
chr10:128103568|128103851 hsa-miR-510-3p 0 0 1
chr10:128103568|128103851 hsa-miR-583 0 0 1
chr10:128103568|128103851 hsa-miR-631 0 1 1
chr10:128103568|128103851 hsa-miR-634 0 0 1
chr10:128103568|128103851 hsa-miR-298 0 0 1
chr10:128103568|128103851 hsa-miR-873-5p 0 0 1
chr10:128103568|128103851 hsa-miR-873-3p 0 0 1
chr10:128103568|128103851 hsa-miR-922 0 0 1
chr10:128103568|128103851 hsa-miR-1266-5p 0 0 1
chr10:128103568|128103851 hsa-miR-1266-3p 0 0 1
chr10:128103568|128103851 hsa-miR-1197 0 0 1
chr10:128103568|128103851 hsa-miR-361-3p 0 0 1
chr10:128103568|128103851 hsa-miR-331-3p 0 0 1
chr10:128103568|128103851 hsa-miR-513a-5p 0 0 1
chr10:128103568|128103851 hsa-miR-140-3p 0 0 1
chr10:128103568|128103851 hsa-miR-548b-3p 0 0 1
chr10:128103568|128103851 hsa-miR-7 0 0 1
chr10:128103568|128103851 hsa-miR-650 1 0 0
chr10:128103568|128103851 hsa-miR-665 1 0 0
chr10:128103568|128103851 hsa-miR-548k 0 1 0
chr10:128103568|128103851 hsa-miR-3128 0 1 0
chr10:128103568|128103851 hsa-miR-3166 0 1 0
chr10:128103568|128103851 hsa-miR-3612 0 1 0
chr10:128103568|128103851 hsa-miR-3661 0 1 0
chr10:128103568|128103851 hsa-miR-4420 0 1 0
chr10:128103568|128103851 hsa-miR-4436a 0 1 0
chr10:128103568|128103851 hsa-miR-4513 0 1 0
chr10:128103568|128103851 hsa-miR-4518 0 1 0
chr10:128103568|128103851 hsa-miR-4521 0 1 0
chr10:128103568|128103851 hsa-miR-4526 1 0 0
chr10:128103568|128103851 hsa-miR-6068 0 1 0
chr10:128103568|128103851 hsa-miR-146a-3p 0 1 0
chr10:128103568|128103851 hsa-miR-3692-5p 0 1 0
chr10:128103568|128103851 hsa-miR-6783-5p 0 1 0
chr10:128103568|128103851 hsa-miR-6770-5p 0 1 0
chr10:128103568|128103851 hsa-miR-3120-3p 1 1 0
chr10:128103568|128103851 hsa-miR-5000-3p 0 1 0
chr10:128103568|128103851 hsa-miR-6868-5p 0 1 0
chr10:128103568|128103851 hsa-miR-5197-3p 0 1 0
chr10:128103568|128103851 hsa-miR-6768-3p 0 1 0
chr10:128103568|128103851 hsa-miR-3664-3p 0 1 0
chr10:128103568|128103851 hsa-miR-6743-5p 1 0 0
chr10:128103568|128103851 hsa-miR-675-5p 1 0 0
chr10:128103568|128103851 hsa-miR-23b-3p 0 1 0
chr10:128103568|128103851 hsa-miR-370-5p 0 1 0
chr10:128103568|128103851 hsa-miR-499a-3p 0 1 0
chr10:128103568|128103851 hsa-miR-3136-3p 0 1 0
chr10:128103568|128103851 hsa-miR-4536-5p 0 1 0
chr10:128103568|128103851 hsa-miR-499b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:128103568|128103851
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MSASVVSPDVCVNLTAEGSSFTCTFCTRVLRCLFVLAVVSTTSSGGDSQGILVALPAVSDS
Nucleotide Sequence TTGTCTGCATCCGTGGTTTCCCCTGATGTTTGTGTGAACTTGACTGCTGAAGGCTCTTCTTTTACTTGTACCTTCTGCACACGTGTCCTGAGATGCCTCTTTGTGCTTGCTGTGGTGTCTACCACTTCTAGTGGGGGAGATTCGCAGGGTATTTTAGTGGCTTTGCCAGCAGTCAGTGATTCCTGA

CircID chr10:128103568|128103851
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MRISPTRSGRHHSKHKEASQDTCAEGTSKRRAFSSQVHTNIRGNHGCRQRTS
Nucleotide Sequence CTGCGAATCTCCCCCACTAGAAGTGGTAGACACCACAGCAAGCACAAAGAGGCATCTCAGGACACGTGTGCAGAAGGTACAAGTAAAAGAAGAGCCTTCAGCAGTCAAGTTCACACAAACATCAGGGGAAACCACGGATGCAGACAAAGAACCAGC

CircID chr10:128103568|128103851
ORF Type ORF3
Protein Length 82
Nucleotide Length 246
Protein Sequence MEDLAGFTELSETSGHTQESLTAGKATKIPCESPPLEVVDTTASTKRHLRTRVQKVQVKEEPSAVKFTQTSGETTDADKEPA
Nucleotide Sequence CTGGAAGACCTGGCCGGCTTCACAGAGCTCTCTGAAACATCAGGTCACACTCAGGAATCACTGACTGCTGGCAAAGCCACTAAAATACCCTGCGAATCTCCCCCACTAGAAGTGGTAGACACCACAGCAAGCACAAAGAGGCATCTCAGGACACGTGTGCAGAAGGTACAAGTAAAAGAAGAGCCTTCAGCAGTCAAGTTCACACAAACATCAGGGGAAACCACGGATGCAGACAAAGAACCAGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites