CircRNA Information

General Information
circRNA Basic Information
CircID chr10:128104736|128105052
Strand -
CircType exon
Host Gene ENSG00000148773.11;
Algorism CIRI2;
Sequence GTCTGCTTTCCTGAGGTTTCTCTTGGGCCGTTGCTTTGTGCTTGCTGGGGTGTCCACTGGGTCTGGTTGTGGAGATTTGCAGGCTATTTTGGTAGTTTTCTCATCAGTCGTGGGCTTGTCAGTGCCTGGTGTCTGGAAGAGCTCTTTGAAGCCAGCCAGGTCTTCTAGAGCCTGGGCCTTTTCCTTAGGAGTTTGTGGCCATCTTTTGCTGCCAGGTAAATTTCCTGGCAGGTCCAATTTCTGCACTGGAGTTCCCATAAATGCTTTCATGTCTTTCTCATCACCTCCTGCTGGTTTGGGTGTGTCCATAGCTTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:128104736|128105052 hsa-miR-148a-5p 0 0 1
chr10:128104736|128105052 hsa-miR-148a-3p 0 0 1
chr10:128104736|128105052 hsa-miR-214-5p 0 0 1
chr10:128104736|128105052 hsa-miR-214-3p 0 0 1
chr10:128104736|128105052 hsa-miR-152-5p 0 0 1
chr10:128104736|128105052 hsa-miR-152-3p 0 0 1
chr10:128104736|128105052 hsa-miR-148b-5p 0 0 1
chr10:128104736|128105052 hsa-miR-148b-3p 0 0 1
chr10:128104736|128105052 hsa-miR-484 0 0 1
chr10:128104736|128105052 hsa-miR-492 0 1 1
chr10:128104736|128105052 hsa-miR-539-5p 0 0 1
chr10:128104736|128105052 hsa-miR-539-3p 0 0 1
chr10:128104736|128105052 hsa-miR-545-5p 0 0 1
chr10:128104736|128105052 hsa-miR-545-3p 0 0 1
chr10:128104736|128105052 hsa-miR-588 0 0 1
chr10:128104736|128105052 hsa-miR-596 0 1 1
chr10:128104736|128105052 hsa-miR-619-5p 0 0 1
chr10:128104736|128105052 hsa-miR-619-3p 0 0 1
chr10:128104736|128105052 hsa-miR-631 1 0 1
chr10:128104736|128105052 hsa-miR-634 0 0 1
chr10:128104736|128105052 hsa-miR-641 0 0 1
chr10:128104736|128105052 hsa-miR-298 0 0 1
chr10:128104736|128105052 hsa-miR-873-5p 0 0 1
chr10:128104736|128105052 hsa-miR-873-3p 0 0 1
chr10:128104736|128105052 hsa-miR-1236-5p 0 0 1
chr10:128104736|128105052 hsa-miR-1236-3p 0 0 1
chr10:128104736|128105052 hsa-miR-1276 0 1 1
chr10:128104736|128105052 hsa-miR-548p 0 0 1
chr10:128104736|128105052 hsa-miR-1292-5p 0 0 1
chr10:128104736|128105052 hsa-miR-1292-3p 0 0 1
chr10:128104736|128105052 hsa-miR-1825 0 0 1
chr10:128104736|128105052 hsa-miR-885-3p 0 0 1
chr10:128104736|128105052 hsa-miR-199a-5p 0 0 1
chr10:128104736|128105052 hsa-miR-525-5p 0 0 1
chr10:128104736|128105052 hsa-miR-330-3p 1 1 1
chr10:128104736|128105052 hsa-miR-508-5p 0 0 1
chr10:128104736|128105052 hsa-miR-199b-5p 0 0 1
chr10:128104736|128105052 hsa-miR-520a-5p 0 0 1
chr10:128104736|128105052 hsa-miR-362-3p 0 1 1
chr10:128104736|128105052 hsa-miR-329 0 0 1
chr10:128104736|128105052 hsa-miR-4269 1 1 0
chr10:128104736|128105052 hsa-miR-3652 1 0 0
chr10:128104736|128105052 hsa-miR-3661 0 1 0
chr10:128104736|128105052 hsa-miR-3916 1 0 0
chr10:128104736|128105052 hsa-miR-3929 1 0 0
chr10:128104736|128105052 hsa-miR-4471 0 1 0
chr10:128104736|128105052 hsa-miR-4521 0 1 0
chr10:128104736|128105052 hsa-miR-4530 1 1 0
chr10:128104736|128105052 hsa-miR-4535 0 1 0
chr10:128104736|128105052 hsa-miR-4647 0 1 0
chr10:128104736|128105052 hsa-miR-4689 1 0 0
chr10:128104736|128105052 hsa-miR-6075 0 1 0
chr10:128104736|128105052 hsa-miR-6165 1 1 0
chr10:128104736|128105052 hsa-miR-8059 0 1 0
chr10:128104736|128105052 hsa-miR-8073 0 1 0
chr10:128104736|128105052 hsa-miR-8089 1 0 0
chr10:128104736|128105052 hsa-miR-4747-3p 0 1 0
chr10:128104736|128105052 hsa-miR-4433a-3p 1 0 0
chr10:128104736|128105052 hsa-miR-6825-5p 1 0 0
chr10:128104736|128105052 hsa-miR-3692-3p 1 0 0
chr10:128104736|128105052 hsa-miR-187-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6510-5p 1 0 0
chr10:128104736|128105052 hsa-miR-4695-5p 1 0 0
chr10:128104736|128105052 hsa-miR-769-5p 0 1 0
chr10:128104736|128105052 hsa-miR-4722-5p 1 1 0
chr10:128104736|128105052 hsa-miR-4755-3p 0 1 0
chr10:128104736|128105052 hsa-miR-6806-5p 0 1 0
chr10:128104736|128105052 hsa-miR-2467-5p 0 1 0
chr10:128104736|128105052 hsa-miR-6798-5p 1 0 0
chr10:128104736|128105052 hsa-miR-2467-3p 1 0 0
chr10:128104736|128105052 hsa-miR-6765-3p 1 0 0
chr10:128104736|128105052 hsa-miR-6858-3p 1 0 0
chr10:128104736|128105052 hsa-miR-6771-5p 1 0 0
chr10:128104736|128105052 hsa-miR-7854-3p 1 0 0
chr10:128104736|128105052 hsa-miR-4638-3p 1 1 0
chr10:128104736|128105052 hsa-miR-4733-3p 0 1 0
chr10:128104736|128105052 hsa-miR-7160-3p 0 1 0
chr10:128104736|128105052 hsa-miR-1911-3p 0 1 0
chr10:128104736|128105052 hsa-miR-3180-5p 1 1 0
chr10:128104736|128105052 hsa-miR-6715a-3p 0 1 0
chr10:128104736|128105052 hsa-miR-4746-5p 1 0 0
chr10:128104736|128105052 hsa-miR-3664-3p 0 1 0
chr10:128104736|128105052 hsa-miR-888-3p 0 1 0
chr10:128104736|128105052 hsa-miR-6812-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6726-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6752-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6803-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6842-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6851-5p 1 1 0
chr10:128104736|128105052 hsa-miR-7110-5p 1 1 0
chr10:128104736|128105052 hsa-miR-6722-3p 1 0 0
chr10:128104736|128105052 hsa-miR-4728-5p 1 0 0
chr10:128104736|128105052 hsa-miR-1909-3p 1 0 0
chr10:128104736|128105052 hsa-miR-4722-3p 0 1 0
chr10:128104736|128105052 hsa-miR-769-3p 1 0 0
chr10:128104736|128105052 hsa-miR-9851-3p 1 1 0
chr10:128104736|128105052 hsa-miR-4701-5p 0 1 0
chr10:128104736|128105052 hsa-miR-3619-5p 1 1 0
chr10:128104736|128105052 hsa-miR-6715b-5p 0 1 0
chr10:128104736|128105052 hsa-miR-6504-5p 0 1 0
chr10:128104736|128105052 hsa-miR-1271-5p 1 0 0
chr10:128104736|128105052 hsa-miR-4482-5p 0 1 0
chr10:128104736|128105052 hsa-miR-7155-3p 1 1 0
chr10:128104736|128105052 hsa-miR-6733-5p 1 0 0
chr10:128104736|128105052 hsa-miR-6502-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:128104736|128105052
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MLCACWGVHWVWLWRFAGYFGSFLISRGLVSAWCLEELFEASQVF
Nucleotide Sequence TTGCTTTGTGCTTGCTGGGGTGTCCACTGGGTCTGGTTGTGGAGATTTGCAGGCTATTTTGGTAGTTTTCTCATCAGTCGTGGGCTTGTCAGTGCCTGGTGTCTGGAAGAGCTCTTTGAAGCCAGCCAGGTCTTCTAG

CircID chr10:128104736|128105052
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MHWSSHKCFHVFLITSCWFGCVHSF
Nucleotide Sequence CTGCACTGGAGTTCCCATAAATGCTTTCATGTCTTTCTCATCACCTCCTGCTGGTTTGGGTGTGTCCATAGCTTT

CircID chr10:128104736|128105052
ORF Type ORF3
Protein Length 102
Nucleotide Length 306
Protein Sequence MRFLLGRCFVLAGVSTGSGCGDLQAILVVFSSVVGLSVPGVWKSSLKPARSSRAWAFSLGVCGHLLLPGKFPGRSNFCTGVPINAFMSFSSPPAGLGVSIAF
Nucleotide Sequence CTGAGGTTTCTCTTGGGCCGTTGCTTTGTGCTTGCTGGGGTGTCCACTGGGTCTGGTTGTGGAGATTTGCAGGCTATTTTGGTAGTTTTCTCATCAGTCGTGGGCTTGTCAGTGCCTGGTGTCTGGAAGAGCTCTTTGAAGCCAGCCAGGTCTTCTAGAGCCTGGGCCTTTTCCTTAGGAGTTTGTGGCCATCTTTTGCTGCCAGGTAAATTTCCTGGCAGGTCCAATTTCTGCACTGGAGTTCCCATAAATGCTTTCATGTCTTTCTCATCACCTCCTGCTGGTTTGGGTGTGTCCATAGCTTTC

CircID chr10:128104736|128105052
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MQISTTRPSGHPSKHKATAQEKPQESR
Nucleotide Sequence CTGCAAATCTCCACAACCAGACCCAGTGGACACCCCAGCAAGCACAAAGCAACGGCCCAAGAGAAACCTCAGGAAAGCAGA

CircID chr10:128104736|128105052
ORF Type ORF5
Protein Length 103
Nucleotide Length 309
Protein Sequence MDTPKPAGGDEKDMKAFMGTPVQKLDLPGNLPGSKRWPQTPKEKAQALEDLAGFKELFQTPGTDKPTTDEKTTKIACKSPQPDPVDTPASTKQRPKRNLRKAD
Nucleotide Sequence ATGGACACACCCAAACCAGCAGGAGGTGATGAGAAAGACATGAAAGCATTTATGGGAACTCCAGTGCAGAAATTGGACCTGCCAGGAAATTTACCTGGCAGCAAAAGATGGCCACAAACTCCTAAGGAAAAGGCCCAGGCTCTAGAAGACCTGGCTGGCTTCAAAGAGCTCTTCCAGACACCAGGCACTGACAAGCCCACGACTGATGAGAAAACTACCAAAATAGCCTGCAAATCTCCACAACCAGACCCAGTGGACACCCCAGCAAGCACAAAGCAACGGCCCAAGAGAAACCTCAGGAAAGCAGAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites