CircRNA Information

General Information
circRNA Basic Information
CircID chr10:132373232|132373350
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGATGGGACAAGAGGAAAGGAAGTTAGAGGACGACCTGAGCAGAGCGAAGCATCCGGCAGGTTCCGGCAGGTTCCAGCAGGAGAGACGAGAGCAGACGGAGGGAGAAGGTGCAGGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:132373232|132373350 hsa-miR-370-5p 0 0 1
chr10:132373232|132373350 hsa-miR-370-3p 0 0 1
chr10:132373232|132373350 hsa-miR-1238-5p 0 0 1
chr10:132373232|132373350 hsa-miR-1238-3p 0 0 1
chr10:132373232|132373350 hsa-miR-1287-5p 0 0 1
chr10:132373232|132373350 hsa-miR-1287-3p 0 0 1
chr10:132373232|132373350 hsa-miR-767-3p 0 0 1
chr10:132373232|132373350 hsa-miR-346 1 0 0
chr10:132373232|132373350 hsa-miR-492 0 1 0
chr10:132373232|132373350 hsa-miR-632 1 0 0
chr10:132373232|132373350 hsa-miR-1203 1 0 0
chr10:132373232|132373350 hsa-miR-1976 1 1 0
chr10:132373232|132373350 hsa-miR-3183 1 0 0
chr10:132373232|132373350 hsa-miR-3909 1 0 0
chr10:132373232|132373350 hsa-miR-4469 1 1 0
chr10:132373232|132373350 hsa-miR-5193 1 0 0
chr10:132373232|132373350 hsa-miR-6892-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6881-3p 1 0 0
chr10:132373232|132373350 hsa-miR-486-5p 1 0 0
chr10:132373232|132373350 hsa-miR-6873-3p 1 1 0
chr10:132373232|132373350 hsa-miR-7110-3p 1 0 0
chr10:132373232|132373350 hsa-miR-877-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6728-3p 1 1 0
chr10:132373232|132373350 hsa-miR-3934-3p 0 1 0
chr10:132373232|132373350 hsa-miR-939-3p 1 0 0
chr10:132373232|132373350 hsa-miR-5001-3p 1 0 0
chr10:132373232|132373350 hsa-miR-7113-3p 1 0 0
chr10:132373232|132373350 hsa-miR-7111-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6780a-3p 1 1 0
chr10:132373232|132373350 hsa-miR-1237-3p 1 1 0
chr10:132373232|132373350 hsa-miR-1236-3p 1 0 0
chr10:132373232|132373350 hsa-miR-3120-5p 1 0 0
chr10:132373232|132373350 hsa-miR-6854-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6828-3p 0 1 0
chr10:132373232|132373350 hsa-miR-629-3p 0 1 0
chr10:132373232|132373350 hsa-miR-2276-5p 1 0 0
chr10:132373232|132373350 hsa-miR-6895-3p 0 1 0
chr10:132373232|132373350 hsa-miR-1468-5p 1 0 0
chr10:132373232|132373350 hsa-miR-6880-3p 1 1 0
chr10:132373232|132373350 hsa-miR-3124-3p 0 1 0
chr10:132373232|132373350 hsa-miR-6734-3p 1 0 0
chr10:132373232|132373350 hsa-miR-431-3p 1 1 0
chr10:132373232|132373350 hsa-miR-3127-3p 1 0 0
chr10:132373232|132373350 hsa-miR-320a-5p 1 1 0
chr10:132373232|132373350 hsa-miR-4685-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6754-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6852-3p 1 1 0
chr10:132373232|132373350 hsa-miR-7107-3p 1 1 0
chr10:132373232|132373350 hsa-miR-6893-3p 1 1 0
chr10:132373232|132373350 hsa-miR-6805-3p 1 0 0
chr10:132373232|132373350 hsa-miR-3059-5p 0 1 0
chr10:132373232|132373350 hsa-miR-6751-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6783-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6827-3p 1 0 0
chr10:132373232|132373350 hsa-miR-6833-3p 1 1 0
chr10:132373232|132373350 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:132373232|132373350
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MGQEERKLEDDLSRAKHPAGSGRFQQERREQTEGEGAGG
Nucleotide Sequence ATGGGACAAGAGGAAAGGAAGTTAGAGGACGACCTGAGCAGAGCGAAGCATCCGGCAGGTTCCGGCAGGTTCCAGCAGGAGAGACGAGAGCAGACGGAGGGAGAAGGTGCAGGAGGG

CircID chr10:132373232|132373350
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MHLLPPSALVSPAGTCRNLPDASLCSGRPLTSFPLVPS
Nucleotide Sequence CTGCACCTTCTCCCTCCGTCTGCTCTCGTCTCTCCTGCTGGAACCTGCCGGAACCTGCCGGATGCTTCGCTCTGCTCAGGTCGTCCTCTAACTTCCTTTCCTCTTGTCCCATCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites