CircRNA Information

General Information
circRNA Basic Information
CircID chr10:133356959|133357278
Strand +
CircType exon
Host Gene ENSG00000148803.10;
Algorism CIRI2;
Sequence GGGCTGTCCTCCCGGCTGTTTAGTTCTTGCGGACTTGAACTTCCCGGCCTCCTCCATCTGCCAGTGTGGGCCCATGGAGATCCGTGCAGACGGTGAGCGAGCCCCAGGTCCCCCAGGGCAGGGCGGGCGGGTGAGCGGTGCTCCTGGCTCTGAGGCTCCTCTGTGGCCTGCCGTGGCCCCAAGTCCATGCTTGCAGTGTGAAGGGTGCAGACAGGCAGGCGGGCGGGCGGGCTGGAGACTGAGTGCTGCCTCCTCTGCCCTCCAGGCCTGGGCATCCCGCAGCTCCTGGAGGCCGTGCTGAAGCTGCTGCCCCTGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:133356959|133357278 hsa-miR-26b-5p 0 0 1
chr10:133356959|133357278 hsa-miR-26b-3p 0 0 1
chr10:133356959|133357278 hsa-miR-198 0 0 1
chr10:133356959|133357278 hsa-miR-136-5p 0 0 1
chr10:133356959|133357278 hsa-miR-136-3p 0 0 1
chr10:133356959|133357278 hsa-miR-377-5p 0 0 1
chr10:133356959|133357278 hsa-miR-377-3p 0 0 1
chr10:133356959|133357278 hsa-miR-346 0 1 1
chr10:133356959|133357278 hsa-miR-492 0 0 1
chr10:133356959|133357278 hsa-miR-558 0 0 1
chr10:133356959|133357278 hsa-miR-622 0 0 1
chr10:133356959|133357278 hsa-miR-625-5p 0 0 1
chr10:133356959|133357278 hsa-miR-625-3p 0 0 1
chr10:133356959|133357278 hsa-miR-631 0 0 1
chr10:133356959|133357278 hsa-miR-632 0 1 1
chr10:133356959|133357278 hsa-miR-637 1 1 1
chr10:133356959|133357278 hsa-miR-646 0 0 1
chr10:133356959|133357278 hsa-miR-650 1 1 1
chr10:133356959|133357278 hsa-miR-766-5p 0 0 1
chr10:133356959|133357278 hsa-miR-766-3p 0 0 1
chr10:133356959|133357278 hsa-miR-765 0 1 1
chr10:133356959|133357278 hsa-miR-874-5p 0 0 1
chr10:133356959|133357278 hsa-miR-874-3p 0 0 1
chr10:133356959|133357278 hsa-miR-708-5p 0 0 1
chr10:133356959|133357278 hsa-miR-708-3p 0 0 1
chr10:133356959|133357278 hsa-miR-665 0 1 1
chr10:133356959|133357278 hsa-miR-1297 0 0 1
chr10:133356959|133357278 hsa-miR-1275 0 0 1
chr10:133356959|133357278 hsa-miR-1827 0 0 1
chr10:133356959|133357278 hsa-miR-296-5p 0 0 1
chr10:133356959|133357278 hsa-miR-486-3p 1 1 1
chr10:133356959|133357278 hsa-miR-146b-3p 0 0 1
chr10:133356959|133357278 hsa-miR-28-5p 0 0 1
chr10:133356959|133357278 hsa-miR-26a 0 0 1
chr10:133356959|133357278 hsa-miR-1254 0 0 1
chr10:133356959|133357278 hsa-miR-507 0 1 0
chr10:133356959|133357278 hsa-miR-661 1 0 0
chr10:133356959|133357278 hsa-miR-762 1 0 0
chr10:133356959|133357278 hsa-miR-940 1 0 0
chr10:133356959|133357278 hsa-miR-1203 1 0 0
chr10:133356959|133357278 hsa-miR-3132 0 1 0
chr10:133356959|133357278 hsa-miR-3139 0 1 0
chr10:133356959|133357278 hsa-miR-3196 1 0 0
chr10:133356959|133357278 hsa-miR-4449 1 0 0
chr10:133356959|133357278 hsa-miR-4479 1 0 0
chr10:133356959|133357278 hsa-miR-4674 1 0 0
chr10:133356959|133357278 hsa-miR-4688 1 0 0
chr10:133356959|133357278 hsa-miR-4739 1 0 0
chr10:133356959|133357278 hsa-miR-5787 1 0 0
chr10:133356959|133357278 hsa-miR-6133 1 0 0
chr10:133356959|133357278 hsa-miR-8082 0 1 0
chr10:133356959|133357278 hsa-miR-9899 0 1 0
chr10:133356959|133357278 hsa-miR-12126 0 1 0
chr10:133356959|133357278 hsa-miR-214-5p 0 1 0
chr10:133356959|133357278 hsa-miR-1247-3p 0 1 0
chr10:133356959|133357278 hsa-miR-6879-3p 1 1 0
chr10:133356959|133357278 hsa-miR-6825-5p 0 1 0
chr10:133356959|133357278 hsa-miR-6894-5p 1 0 0
chr10:133356959|133357278 hsa-miR-1972 0 1 0
chr10:133356959|133357278 hsa-miR-1227-5p 0 1 0
chr10:133356959|133357278 hsa-miR-6089 1 0 0
chr10:133356959|133357278 hsa-miR-7847-3p 0 1 0
chr10:133356959|133357278 hsa-miR-505-5p 0 1 0
chr10:133356959|133357278 hsa-miR-6727-5p 1 0 0
chr10:133356959|133357278 hsa-miR-197-5p 1 1 0
chr10:133356959|133357278 hsa-miR-3180-3p 1 1 0
chr10:133356959|133357278 hsa-miR-185-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6798-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6735-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6858-3p 1 0 0
chr10:133356959|133357278 hsa-miR-1343-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6852-5p 0 1 0
chr10:133356959|133357278 hsa-miR-5088-5p 1 0 0
chr10:133356959|133357278 hsa-miR-4763-5p 1 0 0
chr10:133356959|133357278 hsa-miR-7108-3p 0 1 0
chr10:133356959|133357278 hsa-miR-4640-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6749-5p 1 0 0
chr10:133356959|133357278 hsa-miR-425-3p 1 1 0
chr10:133356959|133357278 hsa-miR-6824-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6789-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6781-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6825-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6743-3p 1 0 0
chr10:133356959|133357278 hsa-miR-3120-5p 0 1 0
chr10:133356959|133357278 hsa-miR-2114-3p 0 1 0
chr10:133356959|133357278 hsa-miR-490-5p 0 1 0
chr10:133356959|133357278 hsa-miR-1178-3p 0 1 0
chr10:133356959|133357278 hsa-miR-1207-5p 1 0 0
chr10:133356959|133357278 hsa-miR-4763-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6870-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6726-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6743-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6803-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6813-5p 0 1 0
chr10:133356959|133357278 hsa-miR-6722-3p 1 0 0
chr10:133356959|133357278 hsa-miR-6879-5p 0 1 0
chr10:133356959|133357278 hsa-miR-1909-3p 1 0 0
chr10:133356959|133357278 hsa-miR-328-5p 1 1 0
chr10:133356959|133357278 hsa-miR-4726-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6777-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6794-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6848-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6889-5p 1 1 0
chr10:133356959|133357278 hsa-miR-6845-5p 0 1 0
chr10:133356959|133357278 hsa-miR-6885-5p 1 0 0
chr10:133356959|133357278 hsa-miR-939-5p 1 1 0
chr10:133356959|133357278 hsa-miR-7843-5p 0 1 0
chr10:133356959|133357278 hsa-miR-3116 0 1 0
chr10:133356959|133357278 hsa-miR-3184-5p 1 1 0
chr10:133356959|133357278 hsa-miR-6724-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6791-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6862-3p 0 1 0
chr10:133356959|133357278 hsa-miR-4756-5p 1 0 0
chr10:133356959|133357278 hsa-miR-6884-5p 0 1 0
chr10:133356959|133357278 hsa-miR-23a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:133356959|133357278
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MSSRLFSSCGLELPGLLHLPVWAHGDPCRR
Nucleotide Sequence CTGTCCTCCCGGCTGTTTAGTTCTTGCGGACTTGAACTTCCCGGCCTCCTCCATCTGCCAGTGTGGGCCCATGGAGATCCGTGCAGACGGTGA
CircID chr10:133356959|133357278
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence METECCLLCPPGLGIPQLLEAVLKLLPLD
Nucleotide Sequence CTGGAGACTGAGTGCTGCCTCCTCTGCCCTCCAGGCCTGGGCATCCCGCAGCTCCTGGAGGCCGTGCTGAAGCTGCTGCCCCTGGAC
CircID chr10:133356959|133357278
ORF Type ORF3
Protein Length 88
Nucleotide Length 267
Protein Sequence MNFPASSICQCGPMEIRADGERAPGPPGQGGRVSGAPGSEAPLWPAVAPSPCLQCEGCRQAGGRAGWRLSAASSALQAWASRSSWRPC
Nucleotide Sequence TTGAACTTCCCGGCCTCCTCCATCTGCCAGTGTGGGCCCATGGAGATCCGTGCAGACGGTGAGCGAGCCCCAGGTCCCCCAGGGCAGGGCGGGCGGGTGAGCGGTGCTCCTGGCTCTGAGGCTCCTCTGTGGCCTGCCGTGGCCCCAAGTCCATGCTTGCAGTGTGAAGGGTGCAGACAGGCAGGCGGGCGGGCGGGCTGGAGACTGAGTGCTGCCTCCTCTGCCCTCCAGGCCTGGGCATCCCGCAGCTCCTGGAGGCCGTGCTGA
CircID chr10:133356959|133357278
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MALRLLCGLPWPQVHACSVKGADRQAGGRAGD
Nucleotide Sequence CTGGCTCTGAGGCTCCTCTGTGGCCTGCCGTGGCCCCAAGTCCATGCTTGCAGTGTGAAGGGTGCAGACAGGCAGGCGGGCGGGCGGGCTGGAGACTGA
CircID chr10:133356959|133357278
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MPPLPSRPGHPAAPGGRAEAAAPGH
Nucleotide Sequence CTGCCTCCTCTGCCCTCCAGGCCTGGGCATCCCGCAGCTCCTGGAGGCCGTGCTGAAGCTGCTGCCCCTGGACAC
CircID chr10:133356959|133357278
ORF Type ORF6
Protein Length 91
Nucleotide Length 273
Protein Sequence MPRPGGQRRQHSVSSPPARLPVCTLHTASMDLGPRQATEEPQSQEHRSPARPALGDLGLAHRLHGSPWAHTGRWRRPGSSSPQELNSREDS
Nucleotide Sequence ATGCCCAGGCCTGGAGGGCAGAGGAGGCAGCACTCAGTCTCCAGCCCGCCCGCCCGCCTGCCTGTCTGCACCCTTCACACTGCAAGCATGGACTTGGGGCCACGGCAGGCCACAGAGGAGCCTCAGAGCCAGGAGCACCGCTCACCCGCCCGCCCTGCCCTGGGGGACCTGGGGCTCGCTCACCGTCTGCACGGATCTCCATGGGCCCACACTGGCAGATGGAGGAGGCCGGGAAGTTCAAGTCCGCAAGAACTAAACAGCCGGGAGGACAGC
CircID chr10:133356959|133357278
ORF Type ORF7
Protein Length 81
Nucleotide Length 246
Protein Sequence MEGRGGSTQSPARPPACLSAPFTLQAWTWGHGRPQRSLRARSTAHPPALPWGTWGSLTVCTDLHGPTLADGGGREVQVRKN
Nucleotide Sequence CTGGAGGGCAGAGGAGGCAGCACTCAGTCTCCAGCCCGCCCGCCCGCCTGCCTGTCTGCACCCTTCACACTGCAAGCATGGACTTGGGGCCACGGCAGGCCACAGAGGAGCCTCAGAGCCAGGAGCACCGCTCACCCGCCCGCCCTGCCCTGGGGGACCTGGGGCTCGCTCACCGTCTGCACGGATCTCCATGGGCCCACACTGGCAGATGGAGGAGGCCGGGAAGTTCAAGTCCGCAAGAACTAA
CircID chr10:133356959|133357278
ORF Type ORF8
Protein Length 94
Nucleotide Length 282
Protein Sequence MRDAQAWRAEEAALSLQPARPPACLHPSHCKHGLGATAGHRGASEPGAPLTRPPCPGGPGARSPSARISMGPHWQMEEAGKFKSARTKQPGGQP
Nucleotide Sequence CTGCGGGATGCCCAGGCCTGGAGGGCAGAGGAGGCAGCACTCAGTCTCCAGCCCGCCCGCCCGCCTGCCTGTCTGCACCCTTCACACTGCAAGCATGGACTTGGGGCCACGGCAGGCCACAGAGGAGCCTCAGAGCCAGGAGCACCGCTCACCCGCCCGCCCTGCCCTGGGGGACCTGGGGCTCGCTCACCGTCTGCACGGATCTCCATGGGCCCACACTGGCAGATGGAGGAGGCCGGGAAGTTCAAGTCCGCAAGAACTAAACAGCCGGGAGGACAGCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab