CircRNA Information

General Information
circRNA Basic Information
CircID chr10:1571782|1571958
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCCTACTCACCTGTCCGCTCACCAGCATATCACCTGCCTACTCACCTTTCCACTCACCAGCACACTCACCTGCCTACTCGCCTGCACACTCACCTGCATACTCACCTGCCCACTCACCAGCATATCACCTGCATACTCACCTGTCCACTCACCTGTCCACTCACCAGCATATCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:1571782|1571958 hsa-miR-496 0 0 1
chr10:1571782|1571958 hsa-miR-552-5p 0 0 1
chr10:1571782|1571958 hsa-miR-552-3p 0 0 1
chr10:1571782|1571958 hsa-miR-648 1 1 1
chr10:1571782|1571958 hsa-miR-657 0 0 1
chr10:1571782|1571958 hsa-miR-190b-5p 0 0 1
chr10:1571782|1571958 hsa-miR-190b-3p 0 0 1
chr10:1571782|1571958 hsa-miR-940 0 0 1
chr10:1571782|1571958 hsa-miR-125a-3p 1 1 1
chr10:1571782|1571958 hsa-miR-574-5p 1 1 1
chr10:1571782|1571958 hsa-miR-138 0 0 1
chr10:1571782|1571958 hsa-miR-190 0 0 1
chr10:1571782|1571958 hsa-miR-571 1 0 0
chr10:1571782|1571958 hsa-miR-595 1 0 0
chr10:1571782|1571958 hsa-miR-612 1 0 0
chr10:1571782|1571958 hsa-miR-933 1 0 0
chr10:1571782|1571958 hsa-miR-1293 1 0 0
chr10:1571782|1571958 hsa-miR-1321 1 0 0
chr10:1571782|1571958 hsa-miR-3138 1 1 0
chr10:1571782|1571958 hsa-miR-3141 1 0 0
chr10:1571782|1571958 hsa-miR-3147 1 0 0
chr10:1571782|1571958 hsa-miR-4299 1 1 0
chr10:1571782|1571958 hsa-miR-3659 1 0 0
chr10:1571782|1571958 hsa-miR-3665 1 1 0
chr10:1571782|1571958 hsa-miR-3937 1 0 0
chr10:1571782|1571958 hsa-miR-4455 1 0 0
chr10:1571782|1571958 hsa-miR-4458 1 0 0
chr10:1571782|1571958 hsa-miR-4466 1 0 0
chr10:1571782|1571958 hsa-miR-3689e 1 1 0
chr10:1571782|1571958 hsa-miR-4481 1 1 0
chr10:1571782|1571958 hsa-miR-4487 1 0 0
chr10:1571782|1571958 hsa-miR-4507 1 0 0
chr10:1571782|1571958 hsa-miR-1587 1 0 0
chr10:1571782|1571958 hsa-miR-4651 1 0 0
chr10:1571782|1571958 hsa-miR-4658 1 1 0
chr10:1571782|1571958 hsa-miR-4669 1 0 0
chr10:1571782|1571958 hsa-miR-4706 1 0 0
chr10:1571782|1571958 hsa-miR-4710 1 0 0
chr10:1571782|1571958 hsa-miR-4734 1 0 0
chr10:1571782|1571958 hsa-miR-4736 1 1 0
chr10:1571782|1571958 hsa-miR-4767 1 0 0
chr10:1571782|1571958 hsa-miR-5192 1 0 0
chr10:1571782|1571958 hsa-miR-5698 1 0 0
chr10:1571782|1571958 hsa-miR-6131 1 0 0
chr10:1571782|1571958 hsa-miR-6745 1 0 0
chr10:1571782|1571958 hsa-miR-6860 1 0 0
chr10:1571782|1571958 hsa-miR-7150 1 0 0
chr10:1571782|1571958 hsa-miR-12115 1 0 0
chr10:1571782|1571958 hsa-miR-12131 1 0 0
chr10:1571782|1571958 hsa-miR-138-5p 1 1 0
chr10:1571782|1571958 hsa-miR-122-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6734-5p 1 0 0
chr10:1571782|1571958 hsa-miR-504-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6747-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6861-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6825-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6799-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6728-5p 1 0 0
chr10:1571782|1571958 hsa-miR-3692-5p 1 1 0
chr10:1571782|1571958 hsa-miR-8071 1 0 0
chr10:1571782|1571958 hsa-miR-6804-5p 1 0 0
chr10:1571782|1571958 hsa-miR-3934-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4695-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6730-5p 1 1 0
chr10:1571782|1571958 hsa-miR-1301-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6806-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6759-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6721-5p 1 1 0
chr10:1571782|1571958 hsa-miR-3180-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6748-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6772-5p 1 0 0
chr10:1571782|1571958 hsa-miR-3190-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6770-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4693-3p 1 0 0
chr10:1571782|1571958 hsa-miR-1229-5p 1 0 0
chr10:1571782|1571958 hsa-miR-1908-5p 1 0 0
chr10:1571782|1571958 hsa-miR-1228-5p 1 1 0
chr10:1571782|1571958 hsa-miR-4690-5p 1 0 0
chr10:1571782|1571958 hsa-miR-92b-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6824-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6800-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6802-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4800-5p 1 0 0
chr10:1571782|1571958 hsa-miR-7112-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6869-5p 1 0 0
chr10:1571782|1571958 hsa-miR-654-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4727-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6792-5p 1 0 0
chr10:1571782|1571958 hsa-miR-2277-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6509-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4520-2-3p 1 0 0
chr10:1571782|1571958 hsa-miR-4520-3p 1 1 0
chr10:1571782|1571958 hsa-miR-1207-5p 1 0 0
chr10:1571782|1571958 hsa-miR-1233-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4763-3p 1 0 0
chr10:1571782|1571958 hsa-miR-6769b-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6778-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6787-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6816-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6893-5p 1 1 0
chr10:1571782|1571958 hsa-miR-1343-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6752-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6756-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6769a-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6803-5p 1 0 0
chr10:1571782|1571958 hsa-miR-7110-5p 1 0 0
chr10:1571782|1571958 hsa-miR-10401-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6751-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6763-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6808-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6879-5p 1 0 0
chr10:1571782|1571958 hsa-miR-3620-5p 1 0 0
chr10:1571782|1571958 hsa-miR-5196-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6780b-5p 1 0 0
chr10:1571782|1571958 hsa-miR-328-5p 1 0 0
chr10:1571782|1571958 hsa-miR-449c-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4649-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4725-3p 1 0 0
chr10:1571782|1571958 hsa-miR-4745-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6729-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6795-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6858-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6883-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6887-5p 1 0 0
chr10:1571782|1571958 hsa-miR-3187-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4436b-3p 1 0 0
chr10:1571782|1571958 hsa-miR-1238-5p 1 1 0
chr10:1571782|1571958 hsa-miR-4758-5p 1 1 0
chr10:1571782|1571958 hsa-miR-4769-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6511a-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6511b-5p 1 1 0
chr10:1571782|1571958 hsa-miR-3940-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6736-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4646-5p 1 0 0
chr10:1571782|1571958 hsa-miR-4747-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6785-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6790-5p 1 1 0
chr10:1571782|1571958 hsa-miR-6849-5p 1 1 0
chr10:1571782|1571958 hsa-miR-10394-5p 1 0 0
chr10:1571782|1571958 hsa-miR-6811-5p 1 1 0
chr10:1571782|1571958 hsa-miR-3689a-5p 1 1 0
chr10:1571782|1571958 hsa-miR-3689b-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:1571782|1571958
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence LPTHLSAHQHITCLLTFPLTSTLTCLLACTLTCILTCPLTSISPAYSPVHSPVHSPAYH
Nucleotide Sequence CTGCCTACTCACCTGTCCGCTCACCAGCATATCACCTGCCTACTCACCTTTCCACTCACCAGCACACTCACCTGCCTACTCGCCTGCACACTCACCTGCATACTCACCTGCCCACTCACCAGCATATCACCTGCATACTCACCTGTCCACTCACCTGTCCACTCACCAGCATATCAC
CircID chr10:1571782|1571958
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MPTHLSTHQHTHLPTRLHTHLHTHLPTHQHITCILTCPLTCPLTSIS
Nucleotide Sequence CTGCCTACTCACCTTTCCACTCACCAGCACACTCACCTGCCTACTCGCCTGCACACTCACCTGCATACTCACCTGCCCACTCACCAGCATATCACCTGCATACTCACCTGTCCACTCACCTGTCCACTCACCAGCATATCA
CircID chr10:1571782|1571958
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MLVSGQVSMQVSVQASRQVSVLVSGKVSRQVICW
Nucleotide Sequence ATGCTGGTGAGTGGGCAGGTGAGTATGCAGGTGAGTGTGCAGGCGAGTAGGCAGGTGAGTGTGCTGGTGAGTGGAAAGGTGAGTAGGCAGGTGATATGCTGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab