CircRNA Information

General Information
circRNA Basic Information
CircID chr10:17233587|17233881
Strand +
CircType exon
Host Gene ENSG00000026025.12;
Algorism CIRI2;
Sequence TTTCATATTGCTGACGTACGTCACGCAGGGCAGCCGTGAGGTCAGGCTTGGAAACATCCACATCGATTTGGACATGCTGTTCCTGAATCTGAGCCTGCAGCTCCTGGATTTCCTGCAAAAAGAACAGACAGACGGTCAGCTCTGCCAACCGTGGGGGCTGCCTTACCCTCATTCATTCCCCGAAAGTCACTCCACTAACCTCTTCGTGGAGTTTCTTCAAAAAGGCAATCTCTTCTTGCAAAGATTCCACTTTGCGTTCAAGGTCAAGACGTGCCAGAGACGCATTGTCAACATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:17233587|17233881 hsa-miR-192-5p 0 0 1
chr10:17233587|17233881 hsa-miR-192-3p 0 0 1
chr10:17233587|17233881 hsa-miR-215-5p 0 0 1
chr10:17233587|17233881 hsa-miR-215-3p 0 0 1
chr10:17233587|17233881 hsa-miR-122-5p 0 0 1
chr10:17233587|17233881 hsa-miR-122-3p 0 0 1
chr10:17233587|17233881 hsa-miR-326 0 0 1
chr10:17233587|17233881 hsa-miR-484 0 1 1
chr10:17233587|17233881 hsa-miR-520g-5p 0 0 1
chr10:17233587|17233881 hsa-miR-520g-3p 0 0 1
chr10:17233587|17233881 hsa-miR-520h 0 0 1
chr10:17233587|17233881 hsa-miR-506-5p 0 0 1
chr10:17233587|17233881 hsa-miR-506-3p 0 0 1
chr10:17233587|17233881 hsa-miR-507 0 0 1
chr10:17233587|17233881 hsa-miR-545-5p 0 0 1
chr10:17233587|17233881 hsa-miR-545-3p 0 0 1
chr10:17233587|17233881 hsa-miR-555 0 0 1
chr10:17233587|17233881 hsa-miR-557 0 0 1
chr10:17233587|17233881 hsa-miR-558 0 0 1
chr10:17233587|17233881 hsa-miR-564 0 0 1
chr10:17233587|17233881 hsa-miR-593-5p 0 0 1
chr10:17233587|17233881 hsa-miR-593-3p 0 0 1
chr10:17233587|17233881 hsa-miR-598-5p 0 0 1
chr10:17233587|17233881 hsa-miR-598-3p 0 0 1
chr10:17233587|17233881 hsa-miR-874-5p 0 0 1
chr10:17233587|17233881 hsa-miR-874-3p 0 0 1
chr10:17233587|17233881 hsa-miR-708-5p 0 0 1
chr10:17233587|17233881 hsa-miR-708-3p 0 0 1
chr10:17233587|17233881 hsa-miR-887-5p 0 0 1
chr10:17233587|17233881 hsa-miR-887-3p 0 0 1
chr10:17233587|17233881 hsa-miR-665 0 1 1
chr10:17233587|17233881 hsa-miR-873-5p 0 0 1
chr10:17233587|17233881 hsa-miR-873-3p 0 0 1
chr10:17233587|17233881 hsa-miR-1205 0 0 1
chr10:17233587|17233881 hsa-miR-1286 0 0 1
chr10:17233587|17233881 hsa-miR-129-5p 0 0 1
chr10:17233587|17233881 hsa-miR-542-5p 0 0 1
chr10:17233587|17233881 hsa-miR-146b-3p 0 0 1
chr10:17233587|17233881 hsa-miR-28-5p 0 0 1
chr10:17233587|17233881 hsa-miR-330-5p 0 0 1
chr10:17233587|17233881 hsa-miR-450b-5p 0 0 1
chr10:17233587|17233881 hsa-miR-124 0 0 1
chr10:17233587|17233881 hsa-miR-24 0 0 1
chr10:17233587|17233881 hsa-miR-3155a 0 1 0
chr10:17233587|17233881 hsa-miR-3164 0 1 0
chr10:17233587|17233881 hsa-miR-3943 0 1 0
chr10:17233587|17233881 hsa-miR-4421 1 0 0
chr10:17233587|17233881 hsa-miR-4657 0 1 0
chr10:17233587|17233881 hsa-miR-4734 0 1 0
chr10:17233587|17233881 hsa-miR-5705 1 0 0
chr10:17233587|17233881 hsa-miR-6081 1 0 0
chr10:17233587|17233881 hsa-miR-12115 1 0 0
chr10:17233587|17233881 hsa-miR-12124 0 1 0
chr10:17233587|17233881 hsa-miR-211-3p 1 0 0
chr10:17233587|17233881 hsa-miR-18a-3p 0 1 0
chr10:17233587|17233881 hsa-miR-6747-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6857-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6854-5p 0 1 0
chr10:17233587|17233881 hsa-miR-1236-5p 1 1 0
chr10:17233587|17233881 hsa-miR-4768-3p 0 1 0
chr10:17233587|17233881 hsa-miR-6880-5p 1 0 0
chr10:17233587|17233881 hsa-miR-7847-3p 1 0 0
chr10:17233587|17233881 hsa-miR-4722-5p 1 0 0
chr10:17233587|17233881 hsa-miR-24-3p 1 1 0
chr10:17233587|17233881 hsa-miR-6727-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6716-5p 1 1 0
chr10:17233587|17233881 hsa-miR-1226-5p 1 0 0
chr10:17233587|17233881 hsa-miR-3191-5p 1 1 0
chr10:17233587|17233881 hsa-miR-425-3p 1 1 0
chr10:17233587|17233881 hsa-miR-5010-5p 1 0 0
chr10:17233587|17233881 hsa-miR-4695-3p 0 1 0
chr10:17233587|17233881 hsa-miR-4520-5p 0 1 0
chr10:17233587|17233881 hsa-miR-4763-3p 1 0 0
chr10:17233587|17233881 hsa-miR-6812-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6775-5p 1 0 0
chr10:17233587|17233881 hsa-miR-1343-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6803-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6813-5p 0 1 0
chr10:17233587|17233881 hsa-miR-6751-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6777-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6846-5p 1 0 0
chr10:17233587|17233881 hsa-miR-939-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6799-3p 0 1 0
chr10:17233587|17233881 hsa-miR-6750-5p 1 0 0
chr10:17233587|17233881 hsa-miR-6849-5p 1 0 0
chr10:17233587|17233881 hsa-miR-10394-5p 0 1 0
chr10:17233587|17233881 hsa-miR-9983-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:17233587|17233881
ORF Type ORF1
Protein Length 96
Nucleotide Length 288
Protein Sequence MLTYVTQGSREVRLGNIHIDLDMLFLNLSLQLLDFLQKEQTDGQLCQPWGLPYPHSFPESHSTNLFVEFLQKGNLFLQRFHFAFKVKTCQRRIVNI
Nucleotide Sequence TTGCTGACGTACGTCACGCAGGGCAGCCGTGAGGTCAGGCTTGGAAACATCCACATCGATTTGGACATGCTGTTCCTGAATCTGAGCCTGCAGCTCCTGGATTTCCTGCAAAAAGAACAGACAGACGGTCAGCTCTGCCAACCGTGGGGGCTGCCTTACCCTCATTCATTCCCCGAAAGTCACTCCACTAACCTCTTCGTGGAGTTTCTTCAAAAAGGCAATCTCTTCTTGCAAAGATTCCACTTTGCGTTCAAGGTCAAGACGTGCCAGAGACGCATTGTCAACATC
CircID chr10:17233587|17233881
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MARLDLERKVESLQEEIAFLKKLHEEVSGVTFGE
Nucleotide Sequence CTGGCACGTCTTGACCTTGAACGCAAAGTGGAATCTTTGCAAGAAGAGATTGCCTTTTTGAAGAAACTCCACGAAGAGGTTAGTGGAGTGACTTTCGGGGAATGA
CircID chr10:17233587|17233881
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MRVRQPPRLAELTVCLFFLQEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYE
Nucleotide Sequence ATGAGGGTAAGGCAGCCCCCACGGTTGGCAGAGCTGACCGTCTGTCTGTTCTTTTTGCAGGAAATCCAGGAGCTGCAGGCTCAGATTCAGGAACAGCATGTCCAAATCGATGTGGATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAA
CircID chr10:17233587|17233881
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MLTMRLWHVLTLNAKWNLCKKRLPF
Nucleotide Sequence ATGTTGACAATGCGTCTCTGGCACGTCTTGACCTTGAACGCAAAGTGGAATCTTTGCAAGAAGAGATTGCCTTTTTGA
CircID chr10:17233587|17233881
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MSKSMWMFPSLTSRLPCVTYVSNMK
Nucleotide Sequence ATGTCCAAATCGATGTGGATGTTTCCAAGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAA
CircID chr10:17233587|17233881
ORF Type ORF6
Protein Length 44
Nucleotide Length 135
Protein Sequence MNEGKAAPTVGRADRLSVLFAGNPGAAGSDSGTACPNRCGCFQA
Nucleotide Sequence ATGAATGAGGGTAAGGCAGCCCCCACGGTTGGCAGAGCTGACCGTCTGTCTGTTCTTTTTGCAGGAAATCCAGGAGCTGCAGGCTCAGATTCAGGAACAGCATGTCCAAATCGATGTGGATGTTTCCAAGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab