CircRNA Information

General Information
circRNA Basic Information
CircID chr10:21742622|21742855
Strand +
CircType exon
Host Gene ENSG00000078403.15;
Algorism CIRI2;
Sequence GGGATGATTCCTGCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCACAGTGGCCCCTTTCTGAAAGAAGTATTTAGCTTTGAATTGATCTGGTTCCCCCAGCAGCCTCAGAACTCACTTAACTCAAGATTTCTTCAAAATATGAGTAGGTCTTAACACTAAAGAAAGCAATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:21742622|21742855 hsa-miR-15a-5p 0 0 1
chr10:21742622|21742855 hsa-miR-15a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-17-5p 0 0 1
chr10:21742622|21742855 hsa-miR-17-3p 0 0 1
chr10:21742622|21742855 hsa-miR-20a-5p 0 0 1
chr10:21742622|21742855 hsa-miR-20a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-93-5p 0 0 1
chr10:21742622|21742855 hsa-miR-93-3p 0 0 1
chr10:21742622|21742855 hsa-miR-106a-5p 0 0 1
chr10:21742622|21742855 hsa-miR-106a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-208a-5p 0 0 1
chr10:21742622|21742855 hsa-miR-208a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-214-5p 0 0 1
chr10:21742622|21742855 hsa-miR-214-3p 0 0 1
chr10:21742622|21742855 hsa-miR-15b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-15b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-136-5p 0 0 1
chr10:21742622|21742855 hsa-miR-136-3p 0 0 1
chr10:21742622|21742855 hsa-miR-195-5p 0 0 1
chr10:21742622|21742855 hsa-miR-195-3p 0 0 1
chr10:21742622|21742855 hsa-miR-106b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-106b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-302a-5p 0 0 1
chr10:21742622|21742855 hsa-miR-302a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-302b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-302b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-302c-5p 0 0 1
chr10:21742622|21742855 hsa-miR-302c-3p 0 0 1
chr10:21742622|21742855 hsa-miR-302d-5p 0 0 1
chr10:21742622|21742855 hsa-miR-302d-3p 0 0 1
chr10:21742622|21742855 hsa-miR-372-5p 0 0 1
chr10:21742622|21742855 hsa-miR-372-3p 0 0 1
chr10:21742622|21742855 hsa-miR-373-5p 0 0 1
chr10:21742622|21742855 hsa-miR-373-3p 0 0 1
chr10:21742622|21742855 hsa-miR-424-5p 0 0 1
chr10:21742622|21742855 hsa-miR-424-3p 0 0 1
chr10:21742622|21742855 hsa-miR-20b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-20b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-497-5p 0 0 1
chr10:21742622|21742855 hsa-miR-497-3p 0 0 1
chr10:21742622|21742855 hsa-miR-520e-5p 0 0 1
chr10:21742622|21742855 hsa-miR-520e-3p 0 0 1
chr10:21742622|21742855 hsa-miR-519e-5p 0 0 1
chr10:21742622|21742855 hsa-miR-519e-3p 0 0 1
chr10:21742622|21742855 hsa-miR-526b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-526b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-520b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-520b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-519d-5p 0 0 1
chr10:21742622|21742855 hsa-miR-519d-3p 0 0 1
chr10:21742622|21742855 hsa-miR-625-5p 0 0 1
chr10:21742622|21742855 hsa-miR-625-3p 0 0 1
chr10:21742622|21742855 hsa-miR-637 0 0 1
chr10:21742622|21742855 hsa-miR-874-5p 0 0 1
chr10:21742622|21742855 hsa-miR-874-3p 0 0 1
chr10:21742622|21742855 hsa-miR-541-5p 0 0 1
chr10:21742622|21742855 hsa-miR-541-3p 0 0 1
chr10:21742622|21742855 hsa-miR-208b-5p 0 0 1
chr10:21742622|21742855 hsa-miR-208b-3p 0 0 1
chr10:21742622|21742855 hsa-miR-938 0 0 1
chr10:21742622|21742855 hsa-miR-1275 0 0 1
chr10:21742622|21742855 hsa-miR-302e 0 0 1
chr10:21742622|21742855 hsa-miR-302f 0 0 1
chr10:21742622|21742855 hsa-miR-1279 0 0 1
chr10:21742622|21742855 hsa-miR-512-3p 0 0 1
chr10:21742622|21742855 hsa-miR-615-3p 0 0 1
chr10:21742622|21742855 hsa-miR-485-5p 0 0 1
chr10:21742622|21742855 hsa-miR-654-5p 0 0 1
chr10:21742622|21742855 hsa-miR-330-3p 0 0 1
chr10:21742622|21742855 hsa-miR-515-3p 0 1 1
chr10:21742622|21742855 hsa-miR-1302 0 0 1
chr10:21742622|21742855 hsa-miR-520d-3p 0 1 1
chr10:21742622|21742855 hsa-miR-455-3p 0 0 1
chr10:21742622|21742855 hsa-miR-520a-3p 0 0 1
chr10:21742622|21742855 hsa-miR-520c-3p 0 0 1
chr10:21742622|21742855 hsa-miR-16 0 0 1
chr10:21742622|21742855 hsa-miR-138 0 0 1
chr10:21742622|21742855 hsa-miR-218 0 0 1
chr10:21742622|21742855 hsa-miR-1826 0 0 1
chr10:21742622|21742855 hsa-miR-499-5p 0 0 1
chr10:21742622|21742855 hsa-miR-610 1 0 0
chr10:21742622|21742855 hsa-miR-762 1 0 0
chr10:21742622|21742855 hsa-miR-761 0 1 0
chr10:21742622|21742855 hsa-miR-3174 1 1 0
chr10:21742622|21742855 hsa-miR-3196 1 0 0
chr10:21742622|21742855 hsa-miR-4289 0 1 0
chr10:21742622|21742855 hsa-miR-4654 1 0 0
chr10:21742622|21742855 hsa-miR-4675 0 1 0
chr10:21742622|21742855 hsa-miR-4688 1 0 0
chr10:21742622|21742855 hsa-miR-4689 1 0 0
chr10:21742622|21742855 hsa-miR-4741 0 1 0
chr10:21742622|21742855 hsa-miR-6085 1 0 0
chr10:21742622|21742855 hsa-miR-8089 1 0 0
chr10:21742622|21742855 hsa-miR-370-3p 1 0 0
chr10:21742622|21742855 hsa-miR-92a-2-5p 0 1 0
chr10:21742622|21742855 hsa-miR-128-1-5p 1 0 0
chr10:21742622|21742855 hsa-miR-4731-5p 0 1 0
chr10:21742622|21742855 hsa-miR-4687-3p 1 1 0
chr10:21742622|21742855 hsa-miR-6510-5p 0 1 0
chr10:21742622|21742855 hsa-miR-3692-5p 0 1 0
chr10:21742622|21742855 hsa-miR-6833-5p 0 1 0
chr10:21742622|21742855 hsa-miR-1227-5p 1 0 0
chr10:21742622|21742855 hsa-miR-7114-5p 1 1 0
chr10:21742622|21742855 hsa-miR-4653-3p 1 0 0
chr10:21742622|21742855 hsa-miR-503-5p 0 1 0
chr10:21742622|21742855 hsa-miR-6793-5p 1 1 0
chr10:21742622|21742855 hsa-miR-6805-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6827-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6874-5p 1 0 0
chr10:21742622|21742855 hsa-miR-615-5p 1 0 0
chr10:21742622|21742855 hsa-miR-1909-5p 1 0 0
chr10:21742622|21742855 hsa-miR-4640-5p 1 0 0
chr10:21742622|21742855 hsa-miR-2276-3p 0 1 0
chr10:21742622|21742855 hsa-miR-4763-3p 1 0 0
chr10:21742622|21742855 hsa-miR-6743-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6756-5p 0 1 0
chr10:21742622|21742855 hsa-miR-6813-5p 1 0 0
chr10:21742622|21742855 hsa-miR-10401-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6722-3p 1 0 0
chr10:21742622|21742855 hsa-miR-10526-3p 1 1 0
chr10:21742622|21742855 hsa-miR-1909-3p 1 0 0
chr10:21742622|21742855 hsa-miR-328-5p 1 0 0
chr10:21742622|21742855 hsa-miR-4726-5p 1 0 0
chr10:21742622|21742855 hsa-miR-4745-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6795-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6846-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6887-5p 1 0 0
chr10:21742622|21742855 hsa-miR-4723-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6845-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6885-5p 1 0 0
chr10:21742622|21742855 hsa-miR-939-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6856-5p 1 0 0
chr10:21742622|21742855 hsa-miR-6855-5p 0 1 0
chr10:21742622|21742855 hsa-miR-324-3p 1 0 0
chr10:21742622|21742855 hsa-miR-6766-5p 0 1 0
chr10:21742622|21742855 hsa-miR-6762-5p 1 1 0
chr10:21742622|21742855 hsa-miR-6822-5p 1 0 0
chr10:21742622|21742855 hsa-miR-33b-3p 0 1 0
chr10:21742622|21742855 hsa-miR-892c-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr10:21742622|21742855
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MIPAARRTDCPTLLSTALAAQWRHLIKGKPHQHFPQWPLSERSI
Nucleotide Sequence ATGATTCCTGCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCACAGTGGCCCCTTTCTGAAAGAAGTATTTAG
CircID chr10:21742622|21742855
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MKEVFSFELIWFPQQPQNSLNSRFLQNMSRS
Nucleotide Sequence CTGAAAGAAGTATTTAGCTTTGAATTGATCTGGTTCCCCCAGCAGCCTCAGAACTCACTTAACTCAAGATTTCTTCAAAATATGAGTAGGTCTTAA
CircID chr10:21742622|21742855
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MSHPAVYSPCSTMEALDQGQTPPALSTVAPF
Nucleotide Sequence CTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCACAGTGGCCCCTTTCTGA
CircID chr10:21742622|21742855
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MWKVLVGFALDQVPPLCCKGCRQQGGTVSPPSSRNHP
Nucleotide Sequence CTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCAGGAATCATCCC
CircID chr10:21742622|21742855
ORF Type ORF5
Protein Length 29
Nucleotide Length 87
Protein Sequence MPLIKCLHCAARAVDSRVGQSVLRAAGII
Nucleotide Sequence TTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCAGGAATCATC
CircID chr10:21742622|21742855
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MRLLGEPDQFKAKYFFQKGATVESAGGVCP
Nucleotide Sequence CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab