CircRNA Information

General Information
circRNA Basic Information
CircID chr10:22601714|22601841
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTGCTCCAACCTCATTCAGAGTTGTGACCCAGAATGCCCAATGCAGGCCACAAGCCTCACCAGGTATCCTACCACTACGGTAAGTCAACAGGTCAAAAACTCAACTCCATCTTCCTTTCTATCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:22601714|22601841 hsa-miR-33a-5p 0 0 1
chr10:22601714|22601841 hsa-miR-33a-3p 0 0 1
chr10:22601714|22601841 hsa-miR-192-5p 0 0 1
chr10:22601714|22601841 hsa-miR-192-3p 0 0 1
chr10:22601714|22601841 hsa-miR-215-5p 0 0 1
chr10:22601714|22601841 hsa-miR-215-3p 0 0 1
chr10:22601714|22601841 hsa-miR-619-5p 0 0 1
chr10:22601714|22601841 hsa-miR-619-3p 0 0 1
chr10:22601714|22601841 hsa-miR-631 0 0 1
chr10:22601714|22601841 hsa-miR-33b-5p 0 0 1
chr10:22601714|22601841 hsa-miR-33b-3p 0 0 1
chr10:22601714|22601841 hsa-miR-663b 0 0 1
chr10:22601714|22601841 hsa-miR-1267 0 0 1
chr10:22601714|22601841 hsa-miR-140-5p 0 0 1
chr10:22601714|22601841 hsa-miR-485-5p 0 0 1
chr10:22601714|22601841 hsa-miR-219-1-3p 0 0 1
chr10:22601714|22601841 hsa-miR-1183 1 0 0
chr10:22601714|22601841 hsa-miR-3125 1 0 0
chr10:22601714|22601841 hsa-miR-3132 1 0 0
chr10:22601714|22601841 hsa-miR-3138 0 1 0
chr10:22601714|22601841 hsa-miR-3154 1 0 0
chr10:22601714|22601841 hsa-miR-1193 1 0 0
chr10:22601714|22601841 hsa-miR-4316 0 1 0
chr10:22601714|22601841 hsa-miR-4533 1 0 0
chr10:22601714|22601841 hsa-miR-4647 0 1 0
chr10:22601714|22601841 hsa-miR-4710 0 1 0
chr10:22601714|22601841 hsa-miR-5191 1 1 0
chr10:22601714|22601841 hsa-miR-6086 0 1 0
chr10:22601714|22601841 hsa-miR-7515 1 1 0
chr10:22601714|22601841 hsa-miR-8082 0 1 0
chr10:22601714|22601841 hsa-miR-9500 1 0 0
chr10:22601714|22601841 hsa-miR-92a-2-5p 0 1 0
chr10:22601714|22601841 hsa-miR-6765-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6894-5p 1 0 0
chr10:22601714|22601841 hsa-miR-219a-1-3p 0 1 0
chr10:22601714|22601841 hsa-miR-6730-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6890-5p 0 1 0
chr10:22601714|22601841 hsa-miR-197-5p 1 1 0
chr10:22601714|22601841 hsa-miR-7108-5p 1 1 0
chr10:22601714|22601841 hsa-miR-185-5p 1 0 0
chr10:22601714|22601841 hsa-miR-1229-5p 1 0 0
chr10:22601714|22601841 hsa-miR-483-5p 1 0 0
chr10:22601714|22601841 hsa-miR-4714-5p 0 1 0
chr10:22601714|22601841 hsa-miR-6726-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6756-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6797-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6758-5p 1 0 0
chr10:22601714|22601841 hsa-miR-6856-5p 1 0 0
chr10:22601714|22601841 hsa-miR-549a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr10:22601714|22601841
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MQATSLTRYPTTTVSQQVKNSTPSSFLS
Nucleotide Sequence ATGCAGGCCACAAGCCTCACCAGGTATCCTACCACTACGGTAAGTCAACAGGTCAAAAACTCAACTCCATCTTCCTTTCTATCC

CircID chr10:22601714|22601841
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPNAGHKPHQVSYHYGKSTGQKLNSIFLSIH
Nucleotide Sequence ATGCCCAATGCAGGCCACAAGCCTCACCAGGTATCCTACCACTACGGTAAGTCAACAGGTCAAAAACTCAACTCCATCTTCCTTTCTATCCAC

CircID chr10:22601714|22601841
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MLTYRSGRIPGEACGLHWAFWVTTLNEVGAE
Nucleotide Sequence CTGTTGACTTACCGTAGTGGTAGGATACCTGGTGAGGCTTGTGGCCTGCATTGGGCATTCTGGGTCACAACTCTGAATGAGGTTGGAGCAGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites