CircRNA Information

General Information
circRNA Basic Information
CircID chr10:24545990|24546181
Strand -
CircType exon
Host Gene ENSG00000120549.14;
Algorism CIRI2;
Sequence CATCGATTGCTTCTAACCCTCTCAGCCCCCAAACAGGACCACCTGCTCACTCTGCCTCCCTCATCCCTTCTGTCTCTAATGGCTCTTTGAAGTTTCAGAGCCTCACTCATACAGGTAAAGGTCACCATCTTTCATTCTCACCGCAGAGTCAAAATGGCCGAGCACCCCCTCCTTTGTCATTTTCCTCCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:24545990|24546181 hsa-miR-580-5p 0 0 1
chr10:24545990|24546181 hsa-miR-580-3p 0 0 1
chr10:24545990|24546181 hsa-miR-650 1 1 1
chr10:24545990|24546181 hsa-miR-765 1 1 1
chr10:24545990|24546181 hsa-miR-760 1 1 1
chr10:24545990|24546181 hsa-miR-1303 1 1 1
chr10:24545990|24546181 hsa-miR-1255a 0 0 1
chr10:24545990|24546181 hsa-miR-1275 1 0 1
chr10:24545990|24546181 hsa-miR-1276 0 1 1
chr10:24545990|24546181 hsa-miR-1321 1 1 1
chr10:24545990|24546181 hsa-miR-1827 0 0 1
chr10:24545990|24546181 hsa-miR-423-3p 0 0 1
chr10:24545990|24546181 hsa-miR-485-5p 0 0 1
chr10:24545990|24546181 hsa-miR-342-5p 0 1 1
chr10:24545990|24546181 hsa-miR-323-5p 0 0 1
chr10:24545990|24546181 hsa-miR-1255b 0 0 1
chr10:24545990|24546181 hsa-miR-564 1 0 0
chr10:24545990|24546181 hsa-miR-608 1 0 0
chr10:24545990|24546181 hsa-miR-637 1 0 0
chr10:24545990|24546181 hsa-miR-658 1 0 0
chr10:24545990|24546181 hsa-miR-762 1 0 0
chr10:24545990|24546181 hsa-miR-298 1 0 0
chr10:24545990|24546181 hsa-miR-920 1 0 0
chr10:24545990|24546181 hsa-miR-3132 1 0 0
chr10:24545990|24546181 hsa-miR-3154 1 1 0
chr10:24545990|24546181 hsa-miR-3185 1 0 0
chr10:24545990|24546181 hsa-miR-3196 1 0 0
chr10:24545990|24546181 hsa-miR-4298 1 0 0
chr10:24545990|24546181 hsa-miR-4321 1 0 0
chr10:24545990|24546181 hsa-miR-4271 1 0 0
chr10:24545990|24546181 hsa-miR-3612 1 1 0
chr10:24545990|24546181 hsa-miR-3665 1 0 0
chr10:24545990|24546181 hsa-miR-3907 0 1 0
chr10:24545990|24546181 hsa-miR-3936 1 0 0
chr10:24545990|24546181 hsa-miR-3945 1 0 0
chr10:24545990|24546181 hsa-miR-4447 1 0 0
chr10:24545990|24546181 hsa-miR-4462 1 0 0
chr10:24545990|24546181 hsa-miR-4466 1 0 0
chr10:24545990|24546181 hsa-miR-4481 1 1 0
chr10:24545990|24546181 hsa-miR-4488 1 0 0
chr10:24545990|24546181 hsa-miR-4498 1 0 0
chr10:24545990|24546181 hsa-miR-4505 1 0 0
chr10:24545990|24546181 hsa-miR-2392 1 0 0
chr10:24545990|24546181 hsa-miR-4508 1 0 0
chr10:24545990|24546181 hsa-miR-4510 1 1 0
chr10:24545990|24546181 hsa-miR-4516 1 0 0
chr10:24545990|24546181 hsa-miR-4534 1 0 0
chr10:24545990|24546181 hsa-miR-4647 0 1 0
chr10:24545990|24546181 hsa-miR-4651 1 0 0
chr10:24545990|24546181 hsa-miR-4656 1 1 0
chr10:24545990|24546181 hsa-miR-4689 1 0 0
chr10:24545990|24546181 hsa-miR-4706 1 0 0
chr10:24545990|24546181 hsa-miR-4710 1 0 0
chr10:24545990|24546181 hsa-miR-4736 1 0 0
chr10:24545990|24546181 hsa-miR-4739 1 1 0
chr10:24545990|24546181 hsa-miR-4741 1 0 0
chr10:24545990|24546181 hsa-miR-4779 1 0 0
chr10:24545990|24546181 hsa-miR-5090 1 0 0
chr10:24545990|24546181 hsa-miR-5192 1 0 0
chr10:24545990|24546181 hsa-miR-5194 1 0 0
chr10:24545990|24546181 hsa-miR-5572 1 0 0
chr10:24545990|24546181 hsa-miR-5698 1 0 0
chr10:24545990|24546181 hsa-miR-5787 1 0 0
chr10:24545990|24546181 hsa-miR-6076 1 0 0
chr10:24545990|24546181 hsa-miR-6085 1 0 0
chr10:24545990|24546181 hsa-miR-6124 1 0 0
chr10:24545990|24546181 hsa-miR-6125 1 0 0
chr10:24545990|24546181 hsa-miR-6127 1 1 0
chr10:24545990|24546181 hsa-miR-6129 1 1 0
chr10:24545990|24546181 hsa-miR-6130 0 1 0
chr10:24545990|24546181 hsa-miR-6133 1 1 0
chr10:24545990|24546181 hsa-miR-6165 1 0 0
chr10:24545990|24546181 hsa-miR-6860 1 0 0
chr10:24545990|24546181 hsa-miR-7150 1 0 0
chr10:24545990|24546181 hsa-miR-7515 1 1 0
chr10:24545990|24546181 hsa-miR-8057 1 1 0
chr10:24545990|24546181 hsa-miR-8085 1 0 0
chr10:24545990|24546181 hsa-miR-9500 1 0 0
chr10:24545990|24546181 hsa-miR-127-5p 0 1 0
chr10:24545990|24546181 hsa-miR-211-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6734-5p 1 0 0
chr10:24545990|24546181 hsa-miR-323a-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6747-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4433a-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6765-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7106-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6825-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6894-5p 1 0 0
chr10:24545990|24546181 hsa-miR-125a-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6799-5p 1 0 0
chr10:24545990|24546181 hsa-miR-766-5p 1 0 0
chr10:24545990|24546181 hsa-miR-1236-5p 1 0 0
chr10:24545990|24546181 hsa-miR-3622a-5p 1 0 0
chr10:24545990|24546181 hsa-miR-5187-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6515-5p 1 0 0
chr10:24545990|24546181 hsa-miR-3192-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6757-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6880-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7847-3p 1 0 0
chr10:24545990|24546181 hsa-miR-4695-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6744-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4722-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6890-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6820-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6741-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6721-5p 1 0 0
chr10:24545990|24546181 hsa-miR-197-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7845-5p 1 0 0
chr10:24545990|24546181 hsa-miR-3180-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6829-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6732-5p 1 1 0
chr10:24545990|24546181 hsa-miR-2467-5p 0 1 0
chr10:24545990|24546181 hsa-miR-6798-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6760-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6881-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6782-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6835-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7109-5p 1 0 0
chr10:24545990|24546181 hsa-miR-1226-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6740-5p 1 1 0
chr10:24545990|24546181 hsa-miR-185-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4690-5p 1 0 0
chr10:24545990|24546181 hsa-let-7b-5p 1 0 0
chr10:24545990|24546181 hsa-miR-149-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6824-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6802-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6892-5p 1 0 0
chr10:24545990|24546181 hsa-miR-5010-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7152-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6792-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6761-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6759-3p 0 1 0
chr10:24545990|24546181 hsa-miR-1244 1 0 0
chr10:24545990|24546181 hsa-miR-431-3p 1 0 0
chr10:24545990|24546181 hsa-miR-1207-5p 1 0 0
chr10:24545990|24546181 hsa-miR-1233-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4763-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6778-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6787-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6812-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6870-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6893-5p 1 0 0
chr10:24545990|24546181 hsa-miR-5001-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6726-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6743-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6752-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6754-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6803-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6813-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6842-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6851-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7110-5p 1 0 0
chr10:24545990|24546181 hsa-miR-10401-5p 1 0 0
chr10:24545990|24546181 hsa-miR-11181-3p 1 1 0
chr10:24545990|24546181 hsa-miR-1249-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6722-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6751-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6779-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6780a-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6797-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6808-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6875-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6879-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7111-5p 1 1 0
chr10:24545990|24546181 hsa-miR-3620-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4728-5p 1 1 0
chr10:24545990|24546181 hsa-miR-5196-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6780b-5p 1 0 0
chr10:24545990|24546181 hsa-miR-1237-5p 1 0 0
chr10:24545990|24546181 hsa-miR-328-5p 1 1 0
chr10:24545990|24546181 hsa-miR-4649-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4725-3p 1 0 0
chr10:24545990|24546181 hsa-miR-4726-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4745-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6729-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6735-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6738-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6794-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6846-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6848-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6858-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6883-5p 1 0 0
chr10:24545990|24546181 hsa-miR-3187-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4697-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4723-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6831-5p 1 1 0
chr10:24545990|24546181 hsa-miR-939-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4758-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4769-5p 1 0 0
chr10:24545990|24546181 hsa-miR-5586-3p 0 1 0
chr10:24545990|24546181 hsa-miR-1910-3p 1 1 0
chr10:24545990|24546181 hsa-miR-6511a-5p 1 1 0
chr10:24545990|24546181 hsa-miR-6758-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6856-5p 1 0 0
chr10:24545990|24546181 hsa-miR-7843-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4665-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6736-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6855-5p 1 0 0
chr10:24545990|24546181 hsa-miR-3173-3p 1 1 0
chr10:24545990|24546181 hsa-miR-6891-5p 1 1 0
chr10:24545990|24546181 hsa-miR-4716-3p 1 0 0
chr10:24545990|24546181 hsa-miR-6785-5p 1 0 0
chr10:24545990|24546181 hsa-miR-4756-5p 1 0 0
chr10:24545990|24546181 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:24545990|24546181
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MLLTLSAPKQDHLLTLPPSSLLSLMAL
Nucleotide Sequence TTGCTTCTAACCCTCTCAGCCCCCAAACAGGACCACCTGCTCACTCTGCCTCCCTCATCCCTTCTGTCTCTAATGGCTCTTTGA
CircID chr10:24545990|24546181
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MKFQSLTHTGKGHHLSFSPQSQNGRAPPPLSFSSS
Nucleotide Sequence TTGAAGTTTCAGAGCCTCACTCATACAGGTAAAGGTCACCATCTTTCATTCTCACCGCAGAGTCAAAATGGCCGAGCACCCCCTCCTTTGTCATTTTCCTCCTCC
CircID chr10:24545990|24546181
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MTKEGVLGHFDSAVRMKDGDLYLYE
Nucleotide Sequence ATGACAAAGGAGGGGGTGCTCGGCCATTTTGACTCTGCGGTGAGAATGAAAGATGGTGACCTTTACCTGTATGAGTGA
CircID chr10:24545990|24546181
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MVTFTCMSEALKLQRAIRDRRDEGGRVSRWSCLGAERVRSNR
Nucleotide Sequence ATGGTGACCTTTACCTGTATGAGTGAGGCTCTGAAACTTCAAAGAGCCATTAGAGACAGAAGGGATGAGGGAGGCAGAGTGAGCAGGTGGTCCTGTTTGGGGGCTGAGAGGGTTAGAAGCAATCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab