CircRNA Information

General Information
circRNA Basic Information
CircID chr10:29422128|29422229
Strand -
CircType exon
Host Gene ENSG00000224597.8;
Algorism CIRI2;
Sequence CAGCAGATTGGAGGTGGAATTGGCCTCAGTGCTTGTCCTGGAGGTGGAGAAGCGGTCAGAGTCCTTGGTGGTGAAGTGGCCCTGCACAAAACGTTGCTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:29422128|29422229 hsa-miR-197-5p 0 0 1
chr10:29422128|29422229 hsa-miR-197-3p 0 0 1
chr10:29422128|29422229 hsa-miR-412-5p 0 0 1
chr10:29422128|29422229 hsa-miR-412-3p 0 0 1
chr10:29422128|29422229 hsa-miR-665 1 0 1
chr10:29422128|29422229 hsa-miR-939-5p 0 0 1
chr10:29422128|29422229 hsa-miR-939-3p 0 0 1
chr10:29422128|29422229 hsa-miR-515-5p 0 0 1
chr10:29422128|29422229 hsa-miR-220b 0 0 1
chr10:29422128|29422229 hsa-miR-107 1 0 0
chr10:29422128|29422229 hsa-miR-663a 1 0 0
chr10:29422128|29422229 hsa-miR-657 1 0 0
chr10:29422128|29422229 hsa-miR-2113 0 1 0
chr10:29422128|29422229 hsa-miR-4436a 0 1 0
chr10:29422128|29422229 hsa-miR-6081 1 0 0
chr10:29422128|29422229 hsa-miR-6090 1 0 0
chr10:29422128|29422229 hsa-miR-6132 1 0 0
chr10:29422128|29422229 hsa-miR-138-1-3p 1 1 0
chr10:29422128|29422229 hsa-miR-3191-5p 1 0 0
chr10:29422128|29422229 hsa-miR-103a-3p 1 0 0
chr10:29422128|29422229 hsa-miR-1306-5p 0 1 0
chr10:29422128|29422229 hsa-miR-135b-3p 1 0 0
chr10:29422128|29422229 hsa-miR-3944-5p 1 0 0
chr10:29422128|29422229 hsa-miR-744-5p 1 0 0
chr10:29422128|29422229 hsa-miR-6837-3p 1 0 0
chr10:29422128|29422229 hsa-miR-1296-5p 1 0 0
chr10:29422128|29422229 hsa-miR-4649-3p 1 1 0
chr10:29422128|29422229 hsa-miR-541-5p 1 0 0
chr10:29422128|29422229 hsa-miR-4714-5p 0 1 0
chr10:29422128|29422229 hsa-miR-885-5p 1 0 0
chr10:29422128|29422229 hsa-miR-6836-5p 1 0 0
chr10:29422128|29422229 hsa-miR-1909-3p 1 0 0
chr10:29422128|29422229 hsa-miR-4685-5p 1 1 0
chr10:29422128|29422229 hsa-miR-11181-5p 0 1 0
chr10:29422128|29422229 hsa-miR-4691-5p 0 1 0
chr10:29422128|29422229 hsa-miR-301a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:29422128|29422229
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MEVELASVLVLEVEKRSESLVVKWPCTKRCS
Nucleotide Sequence TTGGAGGTGGAATTGGCCTCAGTGCTTGTCCTGGAGGTGGAGAAGCGGTCAGAGTCCTTGGTGGTGAAGTGGCCCTGCACAAAACGTTGCTCC

CircID chr10:29422128|29422229
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MCRATSPPRTLTASPPPGQALRPIPPPIC
Nucleotide Sequence TTGTGCAGGGCCACTTCACCACCAAGGACTCTGACCGCTTCTCCACCTCCAGGACAAGCACTGAGGCCAATTCCACCTCCAATCTGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites