CircRNA Information

General Information
circRNA Basic Information
CircID chr10:37299035|37299257
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGAGAAGTTAATTAACCTCTGAAGTGTTGCAGTCTAAGGCACAGAGGCACAGTTCCAGGCAAGGTTCATCTGAATCTTAAGTCCTCACTCTTTGCCACCATCCTCCACTGCTGAGACCATCCCTGTGAGTCCTGCCGCTCTCCTCCCCTGGTCCATATTCACTGCTACTCAATGAGGCCAAGGAAGCCAATGGTCGTGTCCCCAAGAGGATATCTCTCCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:37299035|37299257 hsa-miR-214-5p 0 0 1
chr10:37299035|37299257 hsa-miR-214-3p 0 0 1
chr10:37299035|37299257 hsa-miR-185-5p 0 0 1
chr10:37299035|37299257 hsa-miR-185-3p 0 0 1
chr10:37299035|37299257 hsa-miR-635 0 0 1
chr10:37299035|37299257 hsa-miR-661 1 1 1
chr10:37299035|37299257 hsa-miR-765 1 1 1
chr10:37299035|37299257 hsa-miR-922 0 0 1
chr10:37299035|37299257 hsa-miR-942-5p 0 0 1
chr10:37299035|37299257 hsa-miR-942-3p 0 0 1
chr10:37299035|37299257 hsa-miR-1286 0 0 1
chr10:37299035|37299257 hsa-miR-1224-5p 0 1 1
chr10:37299035|37299257 hsa-miR-502-5p 0 0 1
chr10:37299035|37299257 hsa-miR-513a-5p 1 1 1
chr10:37299035|37299257 hsa-miR-516a-3p 0 0 1
chr10:37299035|37299257 hsa-miR-550 0 0 1
chr10:37299035|37299257 hsa-miR-220c 0 0 1
chr10:37299035|37299257 hsa-miR-1254 0 0 1
chr10:37299035|37299257 hsa-miR-151-3p 0 0 1
chr10:37299035|37299257 hsa-miR-601 1 0 0
chr10:37299035|37299257 hsa-miR-608 1 0 0
chr10:37299035|37299257 hsa-miR-658 1 0 0
chr10:37299035|37299257 hsa-miR-1293 1 0 0
chr10:37299035|37299257 hsa-miR-2861 1 0 0
chr10:37299035|37299257 hsa-miR-3132 1 0 0
chr10:37299035|37299257 hsa-miR-3141 1 0 0
chr10:37299035|37299257 hsa-miR-1193 0 1 0
chr10:37299035|37299257 hsa-miR-3175 1 1 0
chr10:37299035|37299257 hsa-miR-4298 1 0 0
chr10:37299035|37299257 hsa-miR-4270 1 0 0
chr10:37299035|37299257 hsa-miR-4281 1 0 0
chr10:37299035|37299257 hsa-miR-2392 1 1 0
chr10:37299035|37299257 hsa-miR-4519 1 0 0
chr10:37299035|37299257 hsa-miR-3960 1 0 0
chr10:37299035|37299257 hsa-miR-4651 1 0 0
chr10:37299035|37299257 hsa-miR-4688 1 0 0
chr10:37299035|37299257 hsa-miR-4721 1 0 0
chr10:37299035|37299257 hsa-miR-4739 1 1 0
chr10:37299035|37299257 hsa-miR-4754 1 0 0
chr10:37299035|37299257 hsa-miR-4784 0 1 0
chr10:37299035|37299257 hsa-miR-4788 1 0 0
chr10:37299035|37299257 hsa-miR-5192 1 0 0
chr10:37299035|37299257 hsa-miR-6081 1 0 0
chr10:37299035|37299257 hsa-miR-6090 1 0 0
chr10:37299035|37299257 hsa-miR-6860 1 0 0
chr10:37299035|37299257 hsa-miR-7702 0 1 0
chr10:37299035|37299257 hsa-miR-8072 1 0 0
chr10:37299035|37299257 hsa-miR-12114 1 0 0
chr10:37299035|37299257 hsa-miR-12115 1 1 0
chr10:37299035|37299257 hsa-miR-12126 0 1 0
chr10:37299035|37299257 hsa-miR-12128 1 1 0
chr10:37299035|37299257 hsa-miR-29b-1-5p 1 0 0
chr10:37299035|37299257 hsa-miR-211-3p 1 0 0
chr10:37299035|37299257 hsa-miR-135a-3p 1 0 0
chr10:37299035|37299257 hsa-miR-4433b-3p 1 1 0
chr10:37299035|37299257 hsa-miR-4433a-3p 1 0 0
chr10:37299035|37299257 hsa-miR-3150a-3p 1 0 0
chr10:37299035|37299257 hsa-miR-7106-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6825-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6894-5p 1 1 0
chr10:37299035|37299257 hsa-miR-29b-2-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6799-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6510-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6728-5p 1 0 0
chr10:37299035|37299257 hsa-miR-8071 1 0 0
chr10:37299035|37299257 hsa-miR-1236-5p 1 0 0
chr10:37299035|37299257 hsa-miR-5187-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6515-5p 0 1 0
chr10:37299035|37299257 hsa-miR-6807-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6757-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6880-5p 1 1 0
chr10:37299035|37299257 hsa-miR-7847-3p 1 1 0
chr10:37299035|37299257 hsa-miR-197-5p 1 0 0
chr10:37299035|37299257 hsa-miR-8069 1 0 0
chr10:37299035|37299257 hsa-miR-3605-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6798-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6782-5p 1 0 0
chr10:37299035|37299257 hsa-miR-3150b-3p 0 1 0
chr10:37299035|37299257 hsa-miR-6810-5p 1 1 0
chr10:37299035|37299257 hsa-miR-5006-5p 1 0 0
chr10:37299035|37299257 hsa-miR-5088-5p 1 0 0
chr10:37299035|37299257 hsa-miR-7109-5p 1 0 0
chr10:37299035|37299257 hsa-miR-1226-5p 1 0 0
chr10:37299035|37299257 hsa-miR-1229-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4640-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6753-5p 1 1 0
chr10:37299035|37299257 hsa-miR-885-3p 1 0 0
chr10:37299035|37299257 hsa-miR-92b-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4787-5p 1 0 0
chr10:37299035|37299257 hsa-miR-149-3p 1 0 0
chr10:37299035|37299257 hsa-miR-6824-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6789-5p 1 0 0
chr10:37299035|37299257 hsa-miR-550b-2-5p 0 1 0
chr10:37299035|37299257 hsa-miR-450a-2-3p 0 1 0
chr10:37299035|37299257 hsa-miR-5010-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4800-5p 1 1 0
chr10:37299035|37299257 hsa-miR-4776-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6869-5p 1 0 0
chr10:37299035|37299257 hsa-miR-423-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6505-5p 1 0 0
chr10:37299035|37299257 hsa-miR-2116-5p 1 0 0
chr10:37299035|37299257 hsa-miR-1207-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4763-3p 1 0 0
chr10:37299035|37299257 hsa-miR-6769b-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6778-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6865-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6870-5p 1 0 0
chr10:37299035|37299257 hsa-miR-1343-5p 1 0 0
chr10:37299035|37299257 hsa-miR-5001-5p 0 1 0
chr10:37299035|37299257 hsa-miR-6737-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6743-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6754-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6756-5p 1 0 0
chr10:37299035|37299257 hsa-miR-11181-3p 1 1 0
chr10:37299035|37299257 hsa-miR-1249-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6722-3p 1 0 0
chr10:37299035|37299257 hsa-miR-6797-5p 1 0 0
chr10:37299035|37299257 hsa-miR-7111-5p 1 1 0
chr10:37299035|37299257 hsa-miR-4728-5p 1 1 0
chr10:37299035|37299257 hsa-miR-6780b-5p 1 0 0
chr10:37299035|37299257 hsa-miR-328-5p 1 0 0
chr10:37299035|37299257 hsa-miR-449c-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4649-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4685-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4726-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6729-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6738-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6795-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6846-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6848-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6883-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6887-5p 1 1 0
chr10:37299035|37299257 hsa-miR-939-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4758-5p 1 0 0
chr10:37299035|37299257 hsa-miR-7843-5p 1 0 0
chr10:37299035|37299257 hsa-miR-3116 0 1 0
chr10:37299035|37299257 hsa-miR-6791-3p 1 0 0
chr10:37299035|37299257 hsa-miR-3679-5p 1 0 0
chr10:37299035|37299257 hsa-miR-4747-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6785-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6849-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6724-5p 1 0 0
chr10:37299035|37299257 hsa-miR-6529-3p 0 1 0
chr10:37299035|37299257 hsa-miR-3619-5p 1 0 0
chr10:37299035|37299257 hsa-miR-7162-5p 0 1 0
chr10:37299035|37299257 hsa-miR-151a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:37299035|37299257
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MKCCSLRHRGTVPGKVHLNLKSSLFATILHC
Nucleotide Sequence CTGAAGTGTTGCAGTCTAAGGCACAGAGGCACAGTTCCAGGCAAGGTTCATCTGAATCTTAAGTCCTCACTCTTTGCCACCATCCTCCACTGCTGA
CircID chr10:37299035|37299257
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MVHIHCYSMRPRKPMVVSPRGYLSP
Nucleotide Sequence CTGGTCCATATTCACTGCTACTCAATGAGGCCAAGGAAGCCAATGGTCGTGTCCCCAAGAGGATATCTCTCCCCT
CircID chr10:37299035|37299257
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MPPSSTAETIPVSPAALLPWSIFTATQ
Nucleotide Sequence TTGCCACCATCCTCCACTGCTGAGACCATCCCTGTGAGTCCTGCCGCTCTCCTCCCCTGGTCCATATTCACTGCTACTCAATGA
CircID chr10:37299035|37299257
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MPLSSPGPYSLLLNEAKEANGRVPKRISLP
Nucleotide Sequence CTGCCGCTCTCCTCCCCTGGTCCATATTCACTGCTACTCAATGAGGCCAAGGAAGCCAATGGTCGTGTCCCCAAGAGGATATCTCTCCCC
CircID chr10:37299035|37299257
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MGTRPLASLASLSSSEYGPGEESGRTHRDGLSSGGWWQRVRT
Nucleotide Sequence TTGGGGACACGACCATTGGCTTCCTTGGCCTCATTGAGTAGCAGTGAATATGGACCAGGGGAGGAGAGCGGCAGGACTCACAGGGATGGTCTCAGCAGTGGAGGATGGTGGCAAAGAGTGAGGACTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab