CircRNA Information

General Information
circRNA Basic Information
CircID chr10:37301379|37301529
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTGTGCTGCCATAAAACACACCACAGACTTGGTGACTTAAACCACAGATATTTATCTTCTCACAATCCTGGAGGCTGGAAGTCTGCAATCACGGTGCCAGCATGGTCAGGTTCTGGTGAGGGCCTCTTTCCTTCTCACTGTGTGCTCTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:37301379|37301529 hsa-miR-183-5p 0 0 1
chr10:37301379|37301529 hsa-miR-183-3p 0 0 1
chr10:37301379|37301529 hsa-miR-224-5p 0 0 1
chr10:37301379|37301529 hsa-miR-224-3p 0 0 1
chr10:37301379|37301529 hsa-miR-577 0 0 1
chr10:37301379|37301529 hsa-miR-583 0 0 1
chr10:37301379|37301529 hsa-miR-591 0 0 1
chr10:37301379|37301529 hsa-miR-617 0 1 1
chr10:37301379|37301529 hsa-miR-665 0 0 1
chr10:37301379|37301529 hsa-miR-1226-5p 0 0 1
chr10:37301379|37301529 hsa-miR-1226-3p 0 0 1
chr10:37301379|37301529 hsa-miR-1253 0 0 1
chr10:37301379|37301529 hsa-miR-1276 0 0 1
chr10:37301379|37301529 hsa-miR-1252-5p 0 0 1
chr10:37301379|37301529 hsa-miR-1252-3p 0 0 1
chr10:37301379|37301529 hsa-miR-885-3p 0 0 1
chr10:37301379|37301529 hsa-miR-299-5p 0 0 1
chr10:37301379|37301529 hsa-miR-128 0 0 1
chr10:37301379|37301529 hsa-miR-1300 0 0 1
chr10:37301379|37301529 hsa-miR-3139 1 0 0
chr10:37301379|37301529 hsa-miR-4502 1 0 0
chr10:37301379|37301529 hsa-miR-4672 1 0 0
chr10:37301379|37301529 hsa-miR-4739 1 0 0
chr10:37301379|37301529 hsa-miR-134-3p 1 0 0
chr10:37301379|37301529 hsa-miR-1273h-3p 0 1 0
chr10:37301379|37301529 hsa-miR-6747-5p 1 0 0
chr10:37301379|37301529 hsa-miR-3663-3p 1 0 0
chr10:37301379|37301529 hsa-miR-6768-5p 1 0 0
chr10:37301379|37301529 hsa-miR-6770-5p 0 1 0
chr10:37301379|37301529 hsa-miR-5008-5p 1 0 0
chr10:37301379|37301529 hsa-miR-3691-3p 0 1 0
chr10:37301379|37301529 hsa-miR-5088-5p 1 0 0
chr10:37301379|37301529 hsa-miR-585-5p 1 0 0
chr10:37301379|37301529 hsa-miR-28-5p 1 0 0
chr10:37301379|37301529 hsa-miR-3670 1 0 0
chr10:37301379|37301529 hsa-miR-3177-5p 1 0 0
chr10:37301379|37301529 hsa-miR-6735-5p 1 0 0
chr10:37301379|37301529 hsa-miR-6856-5p 1 0 0
chr10:37301379|37301529 hsa-miR-7843-5p 1 0 0
chr10:37301379|37301529 hsa-miR-9851-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:37301379|37301529
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence LCCHKTHHRLGDLNHRYLSSHNPGGWKSAITVPAWSGSGEGLFPSHCVLF
Nucleotide Sequence TTGTGCTGCCATAAAACACACCACAGACTTGGTGACTTAAACCACAGATATTTATCTTCTCACAATCCTGGAGGCTGGAAGTCTGCAATCACGGTGCCAGCATGGTCAGGTTCTGGTGAGGGCCTCTTTCCTTCTCACTGTGTGCTCTTT

CircID chr10:37301379|37301529
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MEAGSLQSRCQHGQVLVRASFLLTVCS
Nucleotide Sequence CTGGAGGCTGGAAGTCTGCAATCACGGTGCCAGCATGGTCAGGTTCTGGTGAGGGCCTCTTTCCTTCTCACTGTGTGCTCT

CircID chr10:37301379|37301529
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MQTSSLQDCEKINICGLSHQVCGVFYGST
Nucleotide Sequence TTGCAGACTTCCAGCCTCCAGGATTGTGAGAAGATAAATATCTGTGGTTTAAGTCACCAAGTCTGTGGTGTGTTTTATGGCAGCACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites