CircNet

General Information

circRNA Basic Information

CircID	chr10:42798486\|42798625
Strand	+
CircType	exon
Host Gene	ENSG00000165733.7;
Algorism	CIRI2;
Sequence	CTCCTCTAAATCCCAGTCATGGGGGGCCTCCACAAGAAATCTGGAGCAGTCCAAAGAGTCAGCCTTGTGCTTACACTCTCTGTCAGGCTGGTTGACACGAAACAACCCTCCAAGCTCTTCTAGAGTATCATCATCTTCTT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:42798486\|42798625	hsa-miR-187-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-187-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-345-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-345-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-432-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-432-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-505-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-505-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-578	0	0	1
chr10:42798486\|42798625	hsa-miR-581	0	0	1
chr10:42798486\|42798625	hsa-miR-650	0	0	1
chr10:42798486\|42798625	hsa-miR-877-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-877-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-1303	0	0	1
chr10:42798486\|42798625	hsa-miR-1272	0	0	1
chr10:42798486\|42798625	hsa-miR-1288-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-1288-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-296-3p	0	0	1
chr10:42798486\|42798625	hsa-miR-9	0	0	1
chr10:42798486\|42798625	hsa-miR-1269	0	0	1
chr10:42798486\|42798625	hsa-miR-768-5p	0	0	1
chr10:42798486\|42798625	hsa-miR-1269a	0	1	0
chr10:42798486\|42798625	hsa-miR-4293	0	1	0
chr10:42798486\|42798625	hsa-miR-3660	0	1	0
chr10:42798486\|42798625	hsa-miR-4457	0	1	0
chr10:42798486\|42798625	hsa-miR-1269b	0	1	0
chr10:42798486\|42798625	hsa-miR-4526	1	0	0
chr10:42798486\|42798625	hsa-miR-4538	0	1	0
chr10:42798486\|42798625	hsa-miR-4647	0	1	0
chr10:42798486\|42798625	hsa-miR-6077	1	0	0
chr10:42798486\|42798625	hsa-miR-12115	1	0	0
chr10:42798486\|42798625	hsa-miR-6894-5p	1	0	0
chr10:42798486\|42798625	hsa-miR-6806-5p	1	0	0
chr10:42798486\|42798625	hsa-miR-3682-3p	0	1	0
chr10:42798486\|42798625	hsa-miR-6772-5p	0	1	0
chr10:42798486\|42798625	hsa-miR-4529-3p	1	1	0
chr10:42798486\|42798625	hsa-miR-3620-5p	1	0	0
chr10:42798486\|42798625	hsa-miR-5009-5p	1	1	0
chr10:42798486\|42798625	hsa-miR-619-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:42798486\|42798625
ORF Type	ORF1
Protein Length	34
Nucleotide Length	105
Protein Sequence	MGGLHKKSGAVQRVSLVLTLSVRLVDTKQPSKLF
Nucleotide Sequence	ATGGGGGGCCTCCACAAGAAATCTGGAGCAGTCCAAAGAGTCAGCCTTGTGCTTACACTCTCTGTCAGGCTGGTTGACACGAAACAACCCTCCAAGCTCTTCTAG

CircID	chr10:42798486\|42798625
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MEQSKESALCLHSLSGWLTRNNPPSSSRVSSSS
Nucleotide Sequence	CTGGAGCAGTCCAAAGAGTCAGCCTTGTGCTTACACTCTCTGTCAGGCTGGTTGACACGAAACAACCCTCCAAGCTCTTCTAGAGTATCATCATCTTCT

CircID	chr10:42798486\|42798625
ORF Type	ORF3
Protein Length	35
Nucleotide Length	108
Protein Sequence	MEGCFVSTSLTESVSTRLTLWTAPDFLWRPPMTGI
Nucleotide Sequence	TTGGAGGGTTGTTTCGTGTCAACCAGCCTGACAGAGAGTGTAAGCACAAGGCTGACTCTTTGGACTGCTCCAGATTTCTTGTGGAGGCCCCCCATGACTGGGATTTAG

CircID	chr10:42798486\|42798625
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MFRVNQPDRECKHKADSLDCSRFLVEAPHDWDLEE
Nucleotide Sequence	TTGTTTCGTGTCAACCAGCCTGACAGAGAGTGTAAGCACAAGGCTGACTCTTTGGACTGCTCCAGATTTCTTGTGGAGGCCCCCCATGACTGGGATTTAGAGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information