CircNet

General Information

circRNA Basic Information

CircID	chr10:43129395\|43129560
Strand	+
CircType	exon
Host Gene	ENSG00000165731.16;
Algorism	CIRI2;
Sequence	TTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACAAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAACAGAAACATCTTGTAGCAGCATTAAATTACAAACACAGGAAGAGCTGATCCATGGGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:43129395\|43129560	hsa-miR-221-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-221-3p	0	0	1
chr10:43129395\|43129560	hsa-miR-222-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-222-3p	0	0	1
chr10:43129395\|43129560	hsa-miR-155-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-155-3p	0	0	1
chr10:43129395\|43129560	hsa-miR-578	0	0	1
chr10:43129395\|43129560	hsa-miR-581	0	0	1
chr10:43129395\|43129560	hsa-miR-591	0	0	1
chr10:43129395\|43129560	hsa-miR-616-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-616-3p	0	0	1
chr10:43129395\|43129560	hsa-miR-1236-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-1236-3p	0	0	1
chr10:43129395\|43129560	hsa-miR-491-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-486-3p	0	1	1
chr10:43129395\|43129560	hsa-miR-490-5p	0	0	1
chr10:43129395\|43129560	hsa-miR-483-3p	0	1	1
chr10:43129395\|43129560	hsa-miR-4447	0	1	0
chr10:43129395\|43129560	hsa-miR-4641	0	1	0
chr10:43129395\|43129560	hsa-miR-5683	0	1	0
chr10:43129395\|43129560	hsa-miR-12122	0	1	0
chr10:43129395\|43129560	hsa-miR-6805-5p	0	1	0
chr10:43129395\|43129560	hsa-miR-4762-3p	0	1	0
chr10:43129395\|43129560	hsa-miR-3140-3p	0	1	0
chr10:43129395\|43129560	hsa-miR-5003-5p	0	1	0
chr10:43129395\|43129560	hsa-miR-4472	0	1	0
chr10:43129395\|43129560	hsa-miR-5195-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:43129395\|43129560
ORF Type	ORF1
Protein Length	29
Nucleotide Length	90
Protein Sequence	MCICDHKQAMKNDKKLMSHGQNLRNRNIL
Nucleotide Sequence	TTGTGCATCTGTGACCACAAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAACAGAAACATCTTGTAG

CircID	chr10:43129395\|43129560
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MSFFIACLWSQMHNTPPVLWGQLLG
Nucleotide Sequence	TTGTCATTCTTCATTGCTTGTTTGTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGA

CircID	chr10:43129395\|43129560
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MTMTHKLLVILHCLFVVTDAQHSSSLVGAAFG
Nucleotide Sequence	CTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTTGTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information