CircRNA Information

General Information
circRNA Basic Information
CircID chr10:43386572|43386788
Strand -
CircType exon
Host Gene ENSG00000169813.15;
Algorism CIRI2;
Sequence TGCTCTTAATTGCTTGTTGGCTGCCTGTGAAAATGATTGAAGTAACTCAAATGTTCCTAACAAAACTAGTCATAGCCACCCATGCTGTTCTGCCCACTGTAGCCGGCCCCGTAACAGCCACTCACTGACTGGCTCTCCAGGCCACTGTAAGTGGCCTGGGCAGCAGACACCCCCATGCCTTGCATCACCTGGCTGCTATACGCCCCATTGCTGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:43386572|43386788 hsa-miR-15a-5p 0 0 1
chr10:43386572|43386788 hsa-miR-15a-3p 0 0 1
chr10:43386572|43386788 hsa-miR-27a-5p 0 0 1
chr10:43386572|43386788 hsa-miR-27a-3p 0 0 1
chr10:43386572|43386788 hsa-miR-15b-5p 0 0 1
chr10:43386572|43386788 hsa-miR-15b-3p 0 0 1
chr10:43386572|43386788 hsa-miR-27b-5p 0 0 1
chr10:43386572|43386788 hsa-miR-27b-3p 0 0 1
chr10:43386572|43386788 hsa-miR-185-5p 0 0 1
chr10:43386572|43386788 hsa-miR-185-3p 0 0 1
chr10:43386572|43386788 hsa-miR-195-5p 0 0 1
chr10:43386572|43386788 hsa-miR-195-3p 0 0 1
chr10:43386572|43386788 hsa-miR-346 0 0 1
chr10:43386572|43386788 hsa-miR-424-5p 0 0 1
chr10:43386572|43386788 hsa-miR-424-3p 0 0 1
chr10:43386572|43386788 hsa-miR-497-5p 0 0 1
chr10:43386572|43386788 hsa-miR-497-3p 0 0 1
chr10:43386572|43386788 hsa-miR-503-5p 0 0 1
chr10:43386572|43386788 hsa-miR-503-3p 0 0 1
chr10:43386572|43386788 hsa-miR-575 0 1 1
chr10:43386572|43386788 hsa-miR-585-5p 0 0 1
chr10:43386572|43386788 hsa-miR-585-3p 0 0 1
chr10:43386572|43386788 hsa-miR-600 0 0 1
chr10:43386572|43386788 hsa-miR-632 0 1 1
chr10:43386572|43386788 hsa-miR-646 0 0 1
chr10:43386572|43386788 hsa-miR-1293 0 0 1
chr10:43386572|43386788 hsa-miR-1258 0 0 1
chr10:43386572|43386788 hsa-miR-139-5p 0 0 1
chr10:43386572|43386788 hsa-miR-125a-3p 0 0 1
chr10:43386572|43386788 hsa-miR-513a-5p 0 0 1
chr10:43386572|43386788 hsa-miR-582-5p 0 0 1
chr10:43386572|43386788 hsa-miR-16 0 0 1
chr10:43386572|43386788 hsa-miR-220c 0 0 1
chr10:43386572|43386788 hsa-miR-1308 0 0 1
chr10:43386572|43386788 hsa-miR-1254 0 0 1
chr10:43386572|43386788 hsa-miR-663a 1 0 0
chr10:43386572|43386788 hsa-miR-762 1 0 0
chr10:43386572|43386788 hsa-miR-298 1 0 0
chr10:43386572|43386788 hsa-miR-1268a 1 0 0
chr10:43386572|43386788 hsa-miR-2861 1 0 0
chr10:43386572|43386788 hsa-miR-3196 1 0 0
chr10:43386572|43386788 hsa-miR-3936 1 0 0
chr10:43386572|43386788 hsa-miR-3937 1 0 0
chr10:43386572|43386788 hsa-miR-1268b 1 0 0
chr10:43386572|43386788 hsa-miR-4430 1 0 0
chr10:43386572|43386788 hsa-miR-4466 1 0 0
chr10:43386572|43386788 hsa-miR-4479 1 0 0
chr10:43386572|43386788 hsa-miR-4487 1 0 0
chr10:43386572|43386788 hsa-miR-4489 1 0 0
chr10:43386572|43386788 hsa-miR-4498 1 0 0
chr10:43386572|43386788 hsa-miR-4508 1 0 0
chr10:43386572|43386788 hsa-miR-1587 1 0 0
chr10:43386572|43386788 hsa-miR-4651 1 0 0
chr10:43386572|43386788 hsa-miR-4737 1 0 0
chr10:43386572|43386788 hsa-miR-4741 1 0 0
chr10:43386572|43386788 hsa-miR-5090 1 0 0
chr10:43386572|43386788 hsa-miR-5572 1 0 0
chr10:43386572|43386788 hsa-miR-5705 1 0 0
chr10:43386572|43386788 hsa-miR-6071 0 1 0
chr10:43386572|43386788 hsa-miR-6085 1 0 0
chr10:43386572|43386788 hsa-miR-6090 1 0 0
chr10:43386572|43386788 hsa-miR-6132 1 0 0
chr10:43386572|43386788 hsa-miR-6745 1 0 0
chr10:43386572|43386788 hsa-miR-6860 1 0 0
chr10:43386572|43386788 hsa-miR-7704 1 0 0
chr10:43386572|43386788 hsa-miR-1972 0 1 0
chr10:43386572|43386788 hsa-miR-4687-3p 1 1 0
chr10:43386572|43386788 hsa-miR-1227-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6089 1 0 0
chr10:43386572|43386788 hsa-miR-6757-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3677-5p 1 1 0
chr10:43386572|43386788 hsa-miR-6890-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6741-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3622b-5p 1 1 0
chr10:43386572|43386788 hsa-miR-197-5p 1 0 0
chr10:43386572|43386788 hsa-miR-7108-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3151-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3180-3p 1 0 0
chr10:43386572|43386788 hsa-miR-6748-5p 1 1 0
chr10:43386572|43386788 hsa-miR-4697-3p 0 1 0
chr10:43386572|43386788 hsa-miR-6732-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6827-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3194-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6786-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6835-5p 1 0 0
chr10:43386572|43386788 hsa-miR-1229-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4640-5p 1 0 0
chr10:43386572|43386788 hsa-miR-1228-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4717-3p 0 1 0
chr10:43386572|43386788 hsa-miR-6749-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6501-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4743-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4787-5p 1 0 0
chr10:43386572|43386788 hsa-miR-103a-3p 1 0 0
chr10:43386572|43386788 hsa-miR-4446-3p 1 0 0
chr10:43386572|43386788 hsa-miR-937-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6781-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6877-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6895-5p 0 1 0
chr10:43386572|43386788 hsa-miR-4708-3p 0 1 0
chr10:43386572|43386788 hsa-miR-744-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6501-3p 1 0 0
chr10:43386572|43386788 hsa-miR-654-3p 0 1 0
chr10:43386572|43386788 hsa-miR-3177-3p 1 0 0
chr10:43386572|43386788 hsa-miR-3675-5p 0 1 0
chr10:43386572|43386788 hsa-miR-1233-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4763-3p 1 0 0
chr10:43386572|43386788 hsa-miR-6816-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6775-5p 1 0 0
chr10:43386572|43386788 hsa-miR-1343-5p 1 0 0
chr10:43386572|43386788 hsa-miR-5001-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6737-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6752-5p 1 1 0
chr10:43386572|43386788 hsa-miR-6756-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6769a-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6803-5p 0 1 0
chr10:43386572|43386788 hsa-miR-6813-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6819-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6842-5p 0 1 0
chr10:43386572|43386788 hsa-miR-6751-5p 0 1 0
chr10:43386572|43386788 hsa-miR-3620-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6836-5p 1 0 0
chr10:43386572|43386788 hsa-miR-10396a-5p 1 0 0
chr10:43386572|43386788 hsa-miR-10396b-5p 1 0 0
chr10:43386572|43386788 hsa-miR-1237-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4726-5p 1 1 0
chr10:43386572|43386788 hsa-miR-4745-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4749-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6846-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6848-5p 1 0 0
chr10:43386572|43386788 hsa-miR-939-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4758-5p 1 1 0
chr10:43386572|43386788 hsa-miR-365b-5p 1 0 0
chr10:43386572|43386788 hsa-miR-3116 0 1 0
chr10:43386572|43386788 hsa-miR-6724-5p 1 0 0
chr10:43386572|43386788 hsa-miR-6762-5p 1 0 0
chr10:43386572|43386788 hsa-miR-4676-5p 1 1 0
chr10:43386572|43386788 hsa-miR-128-2-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:43386572|43386788
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MTGSPGHCKWPGQQTPPCLASPGCYTPHCWP
Nucleotide Sequence CTGACTGGCTCTCCAGGCCACTGTAAGTGGCCTGGGCAGCAGACACCCCCATGCCTTGCATCACCTGGCTGCTATACGCCCCATTGCTGGCCC
CircID chr10:43386572|43386788
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MPVKMIEVTQMFLTKLVIATHAVLPTVAGPVTATH
Nucleotide Sequence CTGCCTGTGAAAATGATTGAAGTAACTCAAATGTTCCTAACAAAACTAGTCATAGCCACCCATGCTGTTCTGCCCACTGTAGCCGGCCCCGTAACAGCCACTCACTGA
CircID chr10:43386572|43386788
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MALQATVSGLGSRHPHALHHLAAIRPIAG
Nucleotide Sequence CTGGCTCTCCAGGCCACTGTAAGTGGCCTGGGCAGCAGACACCCCCATGCCTTGCATCACCTGGCTGCTATACGCCCCATTGCTGGC
CircID chr10:43386572|43386788
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MQGMGVSAAQATYSGLESQSVSGCYGAGYSGQNSMGGYD
Nucleotide Sequence ATGCAAGGCATGGGGGTGTCTGCTGCCCAGGCCACTTACAGTGGCCTGGAGAGCCAGTCAGTGAGTGGCTGTTACGGGGCCGGCTACAGTGGGCAGAACAGCATGGGTGGCTATGACTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab