CircRNA Information

General Information
circRNA Basic Information
CircID chr10:46284373|46284555
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGCAATGGGACTCGGAAAGGACATGGGAGAGAGCTGGAGGAAGCTGACAGAGGGAAGGGAAGAACCCCCCGCCGTCAAAGGCAGGACTCAAGAACGCTGCCTTTCGTGCAAGTGAGATGGGCTCCGCTGCCCGCGCCCGCTTGTTCTCGGTCTTGGCCGACCTGAGGGTGCGTCTCTCCCGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:46284373|46284555 hsa-miR-204-5p 0 0 1
chr10:46284373|46284555 hsa-miR-204-3p 0 0 1
chr10:46284373|46284555 hsa-miR-211-5p 0 0 1
chr10:46284373|46284555 hsa-miR-211-3p 0 0 1
chr10:46284373|46284555 hsa-miR-150-5p 0 0 1
chr10:46284373|46284555 hsa-miR-150-3p 0 0 1
chr10:46284373|46284555 hsa-miR-185-5p 0 0 1
chr10:46284373|46284555 hsa-miR-185-3p 0 0 1
chr10:46284373|46284555 hsa-miR-526b-5p 0 0 1
chr10:46284373|46284555 hsa-miR-526b-3p 0 0 1
chr10:46284373|46284555 hsa-miR-623 0 0 1
chr10:46284373|46284555 hsa-miR-627-5p 0 0 1
chr10:46284373|46284555 hsa-miR-627-3p 0 0 1
chr10:46284373|46284555 hsa-miR-766-5p 0 0 1
chr10:46284373|46284555 hsa-miR-766-3p 0 0 1
chr10:46284373|46284555 hsa-miR-139-3p 0 0 1
chr10:46284373|46284555 hsa-miR-532-3p 0 0 1
chr10:46284373|46284555 hsa-miR-885-3p 0 1 1
chr10:46284373|46284555 hsa-miR-516a-3p 0 0 1
chr10:46284373|46284555 hsa-miR-642 0 0 1
chr10:46284373|46284555 hsa-miR-663 0 0 1
chr10:46284373|46284555 hsa-miR-1469 1 0 0
chr10:46284373|46284555 hsa-miR-3178 0 1 0
chr10:46284373|46284555 hsa-miR-3615 1 0 0
chr10:46284373|46284555 hsa-miR-4466 1 0 0
chr10:46284373|46284555 hsa-miR-4767 0 1 0
chr10:46284373|46284555 hsa-miR-6125 1 0 0
chr10:46284373|46284555 hsa-miR-8081 0 1 0
chr10:46284373|46284555 hsa-miR-8085 0 1 0
chr10:46284373|46284555 hsa-miR-11399 0 1 0
chr10:46284373|46284555 hsa-miR-12115 1 0 0
chr10:46284373|46284555 hsa-miR-12116 1 0 0
chr10:46284373|46284555 hsa-miR-6749-3p 1 0 0
chr10:46284373|46284555 hsa-miR-4665-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6892-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6746-5p 0 1 0
chr10:46284373|46284555 hsa-miR-145-5p 1 0 0
chr10:46284373|46284555 hsa-miR-6875-3p 0 1 0
chr10:46284373|46284555 hsa-miR-6873-3p 1 1 0
chr10:46284373|46284555 hsa-miR-7110-3p 1 1 0
chr10:46284373|46284555 hsa-miR-6845-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6796-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6774-3p 1 0 0
chr10:46284373|46284555 hsa-miR-4713-5p 1 0 0
chr10:46284373|46284555 hsa-miR-7111-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6780a-3p 1 0 0
chr10:46284373|46284555 hsa-miR-339-5p 1 0 0
chr10:46284373|46284555 hsa-miR-7112-5p 0 1 0
chr10:46284373|46284555 hsa-miR-7846-3p 0 1 0
chr10:46284373|46284555 hsa-miR-1237-3p 1 0 0
chr10:46284373|46284555 hsa-miR-1236-3p 1 0 0
chr10:46284373|46284555 hsa-miR-2276-5p 1 1 0
chr10:46284373|46284555 hsa-miR-6741-3p 1 1 0
chr10:46284373|46284555 hsa-miR-3160-5p 1 0 0
chr10:46284373|46284555 hsa-miR-2277-5p 1 1 0
chr10:46284373|46284555 hsa-miR-5584-3p 0 1 0
chr10:46284373|46284555 hsa-miR-6734-3p 1 1 0
chr10:46284373|46284555 hsa-miR-6838-3p 0 1 0
chr10:46284373|46284555 hsa-miR-4727-5p 1 0 0
chr10:46284373|46284555 hsa-miR-2116-3p 1 0 0
chr10:46284373|46284555 hsa-miR-10400-5p 1 0 0
chr10:46284373|46284555 hsa-miR-320a-5p 1 0 0
chr10:46284373|46284555 hsa-miR-449c-5p 1 0 0
chr10:46284373|46284555 hsa-miR-4632-5p 1 0 0
chr10:46284373|46284555 hsa-miR-6729-5p 1 1 0
chr10:46284373|46284555 hsa-miR-2682-3p 1 0 0
chr10:46284373|46284555 hsa-miR-6862-3p 1 0 0
chr10:46284373|46284555 hsa-miR-4723-3p 1 0 0
chr10:46284373|46284555 hsa-miR-5006-3p 0 1 0
chr10:46284373|46284555 hsa-miR-6833-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr10:46284373|46284555
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MEEADRGKGRTPRRQRQDSRTLPFVQVRWAPLPAPACSRSWPT
Nucleotide Sequence CTGGAGGAAGCTGACAGAGGGAAGGGAAGAACCCCCCGCCGTCAAAGGCAGGACTCAAGAACGCTGCCTTTCGTGCAAGTGAGATGGGCTCCGCTGCCCGCGCCCGCTTGTTCTCGGTCTTGGCCGACCTGA

CircID chr10:46284373|46284555
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MGLGKDMGESWRKLTEGREEPPAVKGRTQERCLSCK
Nucleotide Sequence ATGGGACTCGGAAAGGACATGGGAGAGAGCTGGAGGAAGCTGACAGAGGGAAGGGAAGAACCCCCCGCCGTCAAAGGCAGGACTCAAGAACGCTGCCTTTCGTGCAAGTGA

CircID chr10:46284373|46284555
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MPLTAGGSSLPSVSFLQLSPMSFPSPIA
Nucleotide Sequence CTGCCTTTGACGGCGGGGGGTTCTTCCCTTCCCTCTGTCAGCTTCCTCCAGCTCTCTCCCATGTCCTTTCCGAGTCCCATTGCT

CircID chr10:46284373|46284555
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MSPAFDGGGFFPSLCQLPPALSHVLSESHC
Nucleotide Sequence TTGAGTCCTGCCTTTGACGGCGGGGGGTTCTTCCCTTCCCTCTGTCAGCTTCCTCCAGCTCTCTCCCATGTCCTTTCCGAGTCCCATTGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites