CircRNA Information

General Information
circRNA Basic Information
CircID chr10:51697887|51698006
Strand -
CircType exon
Host Gene ENSG00000177613.8;
Algorism CIRI2;
Sequence CTTGCTTGCTTGCCCCCTGTATACCTCCTCCTTGTATACCTCCTCCTTGTATACTGACTCCTTGTATGCCTGCCCCCTGCATCCCTCCTCCTTGTATGCCTGCTCCCTGCATGCCTGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:51697887|51698006 hsa-miR-381-5p 0 0 1
chr10:51697887|51698006 hsa-miR-381-3p 0 0 1
chr10:51697887|51698006 hsa-miR-202-5p 0 0 1
chr10:51697887|51698006 hsa-miR-202-3p 0 0 1
chr10:51697887|51698006 hsa-miR-624-5p 0 0 1
chr10:51697887|51698006 hsa-miR-624-3p 0 0 1
chr10:51697887|51698006 hsa-miR-765 1 1 1
chr10:51697887|51698006 hsa-miR-300 0 0 1
chr10:51697887|51698006 hsa-miR-486-3p 1 1 1
chr10:51697887|51698006 hsa-miR-608 1 0 0
chr10:51697887|51698006 hsa-miR-637 1 0 0
chr10:51697887|51698006 hsa-miR-658 1 0 0
chr10:51697887|51698006 hsa-miR-3141 1 0 0
chr10:51697887|51698006 hsa-miR-3154 1 0 0
chr10:51697887|51698006 hsa-miR-4253 1 0 0
chr10:51697887|51698006 hsa-miR-4270 1 1 0
chr10:51697887|51698006 hsa-miR-3936 1 0 0
chr10:51697887|51698006 hsa-miR-3937 1 0 0
chr10:51697887|51698006 hsa-miR-3945 1 1 0
chr10:51697887|51698006 hsa-miR-4428 1 0 0
chr10:51697887|51698006 hsa-miR-4441 1 1 0
chr10:51697887|51698006 hsa-miR-4466 1 0 0
chr10:51697887|51698006 hsa-miR-4476 1 0 0
chr10:51697887|51698006 hsa-miR-4488 1 0 0
chr10:51697887|51698006 hsa-miR-4498 1 0 0
chr10:51697887|51698006 hsa-miR-4510 1 1 0
chr10:51697887|51698006 hsa-miR-4516 1 0 0
chr10:51697887|51698006 hsa-miR-4525 1 0 0
chr10:51697887|51698006 hsa-miR-4533 1 0 0
chr10:51697887|51698006 hsa-miR-4651 1 0 0
chr10:51697887|51698006 hsa-miR-4688 1 0 0
chr10:51697887|51698006 hsa-miR-4689 0 1 0
chr10:51697887|51698006 hsa-miR-4706 1 0 0
chr10:51697887|51698006 hsa-miR-4739 1 1 0
chr10:51697887|51698006 hsa-miR-4779 1 0 0
chr10:51697887|51698006 hsa-miR-4784 1 0 0
chr10:51697887|51698006 hsa-miR-5090 1 0 0
chr10:51697887|51698006 hsa-miR-5698 1 0 0
chr10:51697887|51698006 hsa-miR-6081 1 1 0
chr10:51697887|51698006 hsa-miR-6090 1 0 0
chr10:51697887|51698006 hsa-miR-6127 1 0 0
chr10:51697887|51698006 hsa-miR-6133 1 0 0
chr10:51697887|51698006 hsa-miR-6165 1 0 0
chr10:51697887|51698006 hsa-miR-8072 1 0 0
chr10:51697887|51698006 hsa-miR-12114 1 0 0
chr10:51697887|51698006 hsa-miR-12118 1 1 0
chr10:51697887|51698006 hsa-miR-12128 0 1 0
chr10:51697887|51698006 hsa-miR-211-3p 1 0 0
chr10:51697887|51698006 hsa-miR-4433b-3p 1 0 0
chr10:51697887|51698006 hsa-miR-6734-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4731-5p 1 0 0
chr10:51697887|51698006 hsa-miR-504-3p 1 0 0
chr10:51697887|51698006 hsa-miR-7106-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6825-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6894-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6799-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6510-5p 1 0 0
chr10:51697887|51698006 hsa-miR-766-5p 1 0 0
chr10:51697887|51698006 hsa-miR-5187-5p 1 0 0
chr10:51697887|51698006 hsa-miR-3192-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6757-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6873-5p 0 1 0
chr10:51697887|51698006 hsa-miR-6880-5p 1 0 0
chr10:51697887|51698006 hsa-miR-7847-3p 1 0 0
chr10:51697887|51698006 hsa-miR-4695-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4722-5p 1 0 0
chr10:51697887|51698006 hsa-miR-7154-3p 1 0 0
chr10:51697887|51698006 hsa-miR-6890-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6806-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6721-5p 1 0 0
chr10:51697887|51698006 hsa-miR-3605-5p 1 0 0
chr10:51697887|51698006 hsa-miR-3180-3p 1 0 0
chr10:51697887|51698006 hsa-miR-6772-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6732-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6805-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6798-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6760-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6881-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6782-5p 1 0 0
chr10:51697887|51698006 hsa-miR-5088-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1229-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4640-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4690-5p 1 0 0
chr10:51697887|51698006 hsa-miR-149-3p 1 0 0
chr10:51697887|51698006 hsa-miR-3162-5p 1 0 0
chr10:51697887|51698006 hsa-miR-5010-5p 1 0 0
chr10:51697887|51698006 hsa-let-7e-5p 1 0 0
chr10:51697887|51698006 hsa-miR-214-3p 1 0 0
chr10:51697887|51698006 hsa-miR-7113-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1207-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1233-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4763-3p 1 0 0
chr10:51697887|51698006 hsa-miR-6778-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6787-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6816-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6865-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6870-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1343-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6726-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6743-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6754-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6851-5p 1 1 0
chr10:51697887|51698006 hsa-miR-11181-3p 1 1 0
chr10:51697887|51698006 hsa-miR-1249-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6722-3p 1 1 0
chr10:51697887|51698006 hsa-miR-6779-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6780a-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6797-5p 1 1 0
chr10:51697887|51698006 hsa-miR-6808-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6875-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6879-5p 1 0 0
chr10:51697887|51698006 hsa-miR-7111-5p 1 1 0
chr10:51697887|51698006 hsa-miR-4728-5p 1 0 0
chr10:51697887|51698006 hsa-miR-5196-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6780b-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6836-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6862-5p 1 1 0
chr10:51697887|51698006 hsa-miR-1237-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1909-3p 1 1 0
chr10:51697887|51698006 hsa-miR-328-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4649-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4725-3p 1 0 0
chr10:51697887|51698006 hsa-miR-4745-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4749-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6729-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6738-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6777-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6794-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6795-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6846-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6848-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6858-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6883-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6887-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6885-5p 1 1 0
chr10:51697887|51698006 hsa-miR-939-5p 1 0 0
chr10:51697887|51698006 hsa-miR-4769-5p 1 0 0
chr10:51697887|51698006 hsa-miR-6511b-5p 1 0 0
chr10:51697887|51698006 hsa-miR-1914-3p 1 0 0
chr10:51697887|51698006 hsa-miR-3173-3p 1 1 0
chr10:51697887|51698006 hsa-miR-6891-5p 1 1 0
chr10:51697887|51698006 hsa-miR-4716-3p 1 1 0
chr10:51697887|51698006 hsa-miR-1185-1-3p 1 1 0
chr10:51697887|51698006 hsa-miR-1185-2-3p 1 1 0
chr10:51697887|51698006 hsa-miR-3619-5p 1 0 0
chr10:51697887|51698006 hsa-miR-135a-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:51697887|51698006
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence LLACPLYTSSLYTSSLYTDSLYACPLHPSSLYACSLHAC
Nucleotide Sequence TTGCTTGCTTGCCCCCTGTATACCTCCTCCTTGTATACCTCCTCCTTGTATACTGACTCCTTGTATGCCTGCCCCCTGCATCCCTCCTCCTTGTATGCCTGCTCCCTGCATGCCTGT
CircID chr10:51697887|51698006
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MLAPCIPPPCIPPPCILTPCMPAPCIPPPCMPAPCMPV
Nucleotide Sequence TTGCTTGCCCCCTGTATACCTCCTCCTTGTATACCTCCTCCTTGTATACTGACTCCTTGTATGCCTGCCCCCTGCATCCCTCCTCCTTGTATGCCTGCTCCCTGCATGCCTGTT
CircID chr10:51697887|51698006
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MQGAGIQGGGMQGAGIQGVSIQGGGIQGGGIQGASKQ
Nucleotide Sequence ATGCAGGGAGCAGGCATACAAGGAGGAGGGATGCAGGGGGCAGGCATACAAGGAGTCAGTATACAAGGAGGAGGTATACAAGGAGGAGGTATACAGGGGGCAAGCAAGCAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab