CircNet

General Information

circRNA Basic Information

CircID	chr10:68422225\|68432510
Strand	-
CircType	exon
Host Gene	ENSG00000138346.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAACTTGTCGGTCCTTCCAGAATCAACTTTGTTCAGATTAGACCAAGAAGAAAAAAATTGTGATATAGATACCCCATTAGGAAATCTTTCCAAATTGATGGAAAACACGTTTGTCAGCAAAAAACTTCGAGATTTAATTATTGACTTTCGTGAACCTCAGTTTATATCCTACCTTAGTTCTGTTCTTCCACATGATGCAAAGGATACAGTTGCCTGCATTCTAAAGGGTTTGAATAAGCCTCAGAGGCAAGCGATGAAAAAGGTACTTCTTTCAAAAGACTACACACTCATCGTGGGTATGCCTGGGACAGGAAAAACAACTACGATATGTACTCTCGTAAGGTAAGAATTCTCTACGCCTGTGGTTTTAGCGTTTTGTTGACCAGCTATACACACTCTGCTGTTGACAATATTCTTTTGAAGTTAGCCAAGTTTAAAATAGGATTTTTGCGTTTGGGTCAGATTCAGAAGGTTCATCCAGCTATCCAGCAATTTACAGAGCAAGAAATTTGCAGATCAAAGTCCATTAAATCCTTAGCTCTTCTAGAAGAACTCTACAATAGTCAATTATTCCTGCATTTTCTCAATAAGTTCCTCCTTATATTTGCCTTTCTCTTTTCTGACTTGTCGAGACTTGGCTTTGTGTTCAATAATTTTTTTCCGATCCTTGTTGAGATTTAGCCTGGTGATAACCACCTTGTTTGGGTGAGTACCCACGTGGACGGTTGTGCTGTTGGCCTACTCACGCTGCACCTGCTCAGTGTAGATGACATCTTTCTTTCTGTACACCTGGACTACCTTGCCAATTTGCTGACCTTTGTAGTGTCCTTGAACTACCTGGACCTCGTCGTCCTTGCGGATGGGTGTGGAGCGGACATTGTACTTCTGCCGCAGCTCCTTGGAGAGCGGGGATGACATGATCTTCCGGTGCACGTGCAAGGGGGCATGGAAGTGACGTTTGCGGTTTTTGCTGCGGTCCAAGTTCACGAAGGGATTGAACTTCATCTTATAGTTGCAACAACATGTATGGGAATAAACCATCCAATATTTTCCCGTAAAATTTTTGATTTTTGTATTGTGGATGAAGCCTCTCAAATTAGCCAACCAATTTGTCTGGGCCCCCTTTTTTTTTCACGGAGATTTGTGTTAGTGGGGGACCATCAGCAGCTTCCTCCCCTGGTGCTAAACCGTGAAGCAAGAGCTCTTGGCATGAGTGAAAGCTTATTCAAGAGGCTGGAGCAGAATAAGAGTGCTGTTGTACAGTTAACCGTGCAGTACAGAATGAACAGTAAAATTATGTCCTTAAGTAATAAGCTGACCTATGAGGGCAAGCTGGAGTGTGGATCAGACAAAGTGGCCAATGCAGTGATAAACCTACGTCACTTTAAAGATGTGAAGCTGGAACTGGAATTTTATGCTGACTATTCTGATAATCCTTGGTTGATGGGAGTATTTGAACCCAACAATCCTGTTTGTTTCCTTAATACAGACAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:68422225\|68432510	hsa-miR-1231	1	1	1
chr10:68422225\|68432510	hsa-miR-3188	1	1	1
chr10:68422225\|68432510	hsa-miR-3911	1	1	1
chr10:68422225\|68432510	hsa-miR-4448	1	1	1
chr10:68422225\|68432510	hsa-miR-3135b	1	1	1
chr10:68422225\|68432510	hsa-miR-4752	1	1	1
chr10:68422225\|68432510	hsa-miR-4754	1	1	1
chr10:68422225\|68432510	hsa-miR-5192	1	1	1
chr10:68422225\|68432510	hsa-miR-141-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-370-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-129-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-7114-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-3677-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-6741-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-3622b-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-4728-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-1915-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-659-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-6748-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-6793-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-6805-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-486-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-6765-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-6874-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-6850-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-939-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-6740-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-1229-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-619-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-485-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-4638-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-3189-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-4664-3p	1	1	1
chr10:68422225\|68432510	hsa-miR-500a-5p	1	1	1
chr10:68422225\|68432510	hsa-miR-6801-5p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:68422225\|68432510
ORF Type	ORF1
Protein Length	183
Nucleotide Length	549
Protein Sequence	MEVTFAVFAAVQVHEGIELHLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDK
Nucleotide Sequence	ATGGAAGTGACGTTTGCGGTTTTTGCTGCGGTCCAAGTTCACGAAGGGATTGAACTTCATCTTATAGTTGCAACAACATGTATGGGAATAAACCATCCAATATTTTCCCGTAAAATTTTTGATTTTTGTATTGTGGATGAAGCCTCTCAAATTAGCCAACCAATTTGTCTGGGCCCCCTTTTTTTTTCACGGAGATTTGTGTTAGTGGGGGACCATCAGCAGCTTCCTCCCCTGGTGCTAAACCGTGAAGCAAGAGCTCTTGGCATGAGTGAAAGCTTATTCAAGAGGCTGGAGCAGAATAAGAGTGCTGTTGTACAGTTAACCGTGCAGTACAGAATGAACAGTAAAATTATGTCCTTAAGTAATAAGCTGACCTATGAGGGCAAGCTGGAGTGTGGATCAGACAAAGTGGCCAATGCAGTGATAAACCTACGTCACTTTAAAGATGTGAAGCTGGAACTGGAATTTTATGCTGACTATTCTGATAATCCTTGGTTGATGGGAGTATTTGAACCCAACAATCCTGTTTGTTTCCTTAATACAGACAAG

CircID	chr10:68422225\|68432510
ORF Type	ORF2
Protein Length	118
Nucleotide Length	354
Protein Sequence	MYSRKVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSKSIKSLALLEELYNSQLFLHFLNKFLLIFAFLFSDLSRLGFVFNNFFPILVEI*
Nucleotide Sequence	ATGTACTCTCGTAAGGTAAGAATTCTCTACGCCTGTGGTTTTAGCGTTTTGTTGACCAGCTATACACACTCTGCTGTTGACAATATTCTTTTGAAGTTAGCCAAGTTTAAAATAGGATTTTTGCGTTTGGGTCAGATTCAGAAGGTTCATCCAGCTATCCAGCAATTTACAGAGCAAGAAATTTGCAGATCAAAGTCCATTAAATCCTTAGCTCTTCTAGAAGAACTCTACAATAGTCAATTATTCCTGCATTTTCTCAATAAGTTCCTCCTTATATTTGCCTTTCTCTTTTCTGACTTGTCGAGACTTGGCTTTGTGTTCAATAATTTTTTTCCGATCCTTGTTGAGATTTAG

CircID	chr10:68422225\|68432510
ORF Type	ORF3
Protein Length	101
Nucleotide Length	303
Protein Sequence	MVYSHTCCCNYKMKFNPFVNLDRSKNRKRHFHAPLHVHRKIMSSPLSKELRQKYNVRSTPIRKDDEVQVVQGHYKGQQIGKVVQVYRKKDVIYTEQVQRE*
Nucleotide Sequence	ATGGTTTATTCCCATACATGTTGTTGCAACTATAAGATGAAGTTCAATCCCTTCGTGAACTTGGACCGCAGCAAAAACCGCAAACGTCACTTCCATGCCCCCTTGCACGTGCACCGGAAGATCATGTCATCCCCGCTCTCCAAGGAGCTGCGGCAGAAGTACAATGTCCGCTCCACACCCATCCGCAAGGACGACGAGGTCCAGGTAGTTCAAGGACACTACAAAGGTCAGCAAATTGGCAAGGTAGTCCAGGTGTACAGAAAGAAAGATGTCATCTACACTGAGCAGGTGCAGCGTGAGTAG

CircID	chr10:68422225\|68432510
ORF Type	ORF4
Protein Length	83
Nucleotide Length	249
Protein Sequence	MENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVR*
Nucleotide Sequence	ATGGAAAACACGTTTGTCAGCAAAAAACTTCGAGATTTAATTATTGACTTTCGTGAACCTCAGTTTATATCCTACCTTAGTTCTGTTCTTCCACATGATGCAAAGGATACAGTTGCCTGCATTCTAAAGGGTTTGAATAAGCCTCAGAGGCAAGCGATGAAAAAGGTACTTCTTTCAAAAGACTACACACTCATCGTGGGTATGCCTGGGACAGGAAAAACAACTACGATATGTACTCTCGTAAGGTAA

CircID	chr10:68422225\|68432510
ORF Type	ORF5
Protein Length	38
Nucleotide Length	114
Protein Sequence	MPPCTCTGRSCHPRSPRSCGRSTMSAPHPSARTTRSR*
Nucleotide Sequence	ATGCCCCCTTGCACGTGCACCGGAAGATCATGTCATCCCCGCTCTCCAAGGAGCTGCGGCAGAAGTACAATGTCCGCTCCACACCCATCCGCAAGGACGACGAGGTCCAGGTAG

CircID	chr10:68422225\|68432510
ORF Type	ORF6
Protein Length	32
Nucleotide Length	96
Protein Sequence	MSSTLSRCSVSRPTAQPSTWVLTQTRWLSPG*
Nucleotide Sequence	ATGTCATCTACACTGAGCAGGTGCAGCGTGAGTAGGCCAACAGCACAACCGTCCACGTGGGTACTCACCCAAACAAGGTGGTTATCACCAGGCTAA

CircID	chr10:68422225\|68432510
ORF Type	ORF7
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGVERTLYFCRSSLESGDDMIFRCTCKGAWK*
Nucleotide Sequence	ATGGGTGTGGAGCGGACATTGTACTTCTGCCGCAGCTCCTTGGAGAGCGGGGATGACATGATCTTCCGGTGCACGTGCAAGGGGGCATGGAAGTGA

CircID	chr10:68422225\|68432510
ORF Type	ORF8
Protein Length	70
Nucleotide Length	210
Protein Sequence	VSTHVDGCAVGLLTLHLLSVDDIFLSVHLDYLANLLTFVVSLNYLDLVVLADGCGADIVLLPQLLGERG*
Nucleotide Sequence	GTGAGTACCCACGTGGACGGTTGTGCTGTTGGCCTACTCACGCTGCACCTGCTCAGTGTAGATGACATCTTTCTTTCTGTACACCTGGACTACCTTGCCAATTTGCTGACCTTTGTAGTGTCCTTGAACTACCTGGACCTCGTCGTCCTTGCGGATGGGTGTGGAGCGGACATTGTACTTCTGCCGCAGCTCCTTGGAGAGCGGGGATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:68422225\|68432510	U2AF2	12	7	11
chr10:68422225\|68432510	MOV10	0	0	1
chr10:68422225\|68432510	ELAVL1	3	9	7
chr10:68422225\|68432510	DHX9	2	1	2
chr10:68422225\|68432510	FAM120A	2	0	1
chr10:68422225\|68432510	CELF2	1	0	0
chr10:68422225\|68432510	PRPF8	0	0	2
chr10:68422225\|68432510	SLBP	1	0	0
chr10:68422225\|68432510	TAF15	6	2	0
chr10:68422225\|68432510	FMR1	0	0	2
chr10:68422225\|68432510	CPSF6	0	0	1
chr10:68422225\|68432510	SAFB2	1	0	0
chr10:68422225\|68432510	SRSF1	1	0	1
chr10:68422225\|68432510	NOP58	2	1	6
chr10:68422225\|68432510	CSTF2	0	1	0
chr10:68422225\|68432510	U2AF1	0	0	2
chr10:68422225\|68432510	NOP56	0	1	1
chr10:68422225\|68432510	SRSF9	0	0	1
chr10:68422225\|68432510	HNRNPU	10	0	0
chr10:68422225\|68432510	DDX54	0	0	6
chr10:68422225\|68432510	RBM10	2	1	0
chr10:68422225\|68432510	PCBP2	4	0	0
chr10:68422225\|68432510	HNRNPM	0	0	8
chr10:68422225\|68432510	SF3A3	2	0	0
chr10:68422225\|68432510	PTBP1	0	0	4
chr10:68422225\|68432510	HNRNPC	9	6	4
chr10:68422225\|68432510	TRA2A	0	0	1
chr10:68422225\|68432510	HNRNPA2B1	2	0	0
chr10:68422225\|68432510	ZNF184	0	0	2
chr10:68422225\|68432510	HNRNPA1	5	1	0
chr10:68422225\|68432510	LARP4B	0	0	1
chr10:68422225\|68432510	SMNDC1	0	0	1
chr10:68422225\|68432510	MSI2	0	0	1
chr10:68422225\|68432510	ACIN1	0	0	4
chr10:68422225\|68432510	RANGAP1	1	0	0
chr10:68422225\|68432510	LIN28B	1	0	0
chr10:68422225\|68432510	NUMA1	1	0	0
chr10:68422225\|68432510	IGF2BP1	0	0	1
chr10:68422225\|68432510	IGF2BP2	0	6	6
chr10:68422225\|68432510	HNRNPUL1	2	0	0
chr10:68422225\|68432510	GTF2F1	2	0	0
chr10:68422225\|68432510	RBFOX2	0	1	0
chr10:68422225\|68432510	RBM47	0	0	1
chr10:68422225\|68432510	DDX42	1	0	0
chr10:68422225\|68432510	CSTF2T	3	0	1
chr10:68422225\|68432510	TIA1	2	0	0
chr10:68422225\|68432510	TARBP2	0	1	0
chr10:68422225\|68432510	RBM22	0	1	0
chr10:68422225\|68432510	HNRNPK	2	0	0
chr10:68422225\|68432510	AGO2	0	0	4
chr10:68422225\|68432510	EIF4A3	0	1	12
chr10:68422225\|68432510	FBL	1	2	7

CircRNA Information