CircNet

General Information

circRNA Basic Information

CircID	chr10:68737845\|68742569
Strand	+
CircType	exon
Host Gene	ENSG00000060339.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	CAATATTCACAACCTCAGCAGGCCCTGTATAGTGTGCAACAACAGTTACAGCAACCCCAGCAAACCCTCTTAACACAGCCAGCTGTTGCACTGCCTACAAGCCTTAGCCTGTCTACTCCTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCAAGGTCCAGTCAACAGCAAACCCAGCCTCAGAAGCAGCGTGTTTTCACAGGGGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:68737845\|68742569	hsa-miR-19a-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-19a-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-27a-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-27a-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-214-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-214-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-27b-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-27b-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-487a-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-487a-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-503-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-503-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-505-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-505-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-545-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-545-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-596	0	0	1
chr10:68737845\|68742569	hsa-miR-608	1	1	1
chr10:68737845\|68742569	hsa-miR-630	0	0	1
chr10:68737845\|68742569	hsa-miR-648	0	0	1
chr10:68737845\|68742569	hsa-miR-421	0	0	1
chr10:68737845\|68742569	hsa-miR-1323	0	0	1
chr10:68737845\|68742569	hsa-miR-922	0	0	1
chr10:68737845\|68742569	hsa-miR-934	0	0	1
chr10:68737845\|68742569	hsa-miR-1290	0	0	1
chr10:68737845\|68742569	hsa-miR-1291	0	1	1
chr10:68737845\|68742569	hsa-miR-1293	0	0	1
chr10:68737845\|68742569	hsa-miR-1255a	0	0	1
chr10:68737845\|68742569	hsa-miR-548o-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-513b-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-513b-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-548o	0	0	1
chr10:68737845\|68742569	hsa-miR-146b-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-409-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-876-3p	0	0	1
chr10:68737845\|68742569	hsa-miR-513a-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-524-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-876-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-520d-5p	0	0	1
chr10:68737845\|68742569	hsa-miR-1255b	0	0	1
chr10:68737845\|68742569	hsa-miR-220c	0	0	1
chr10:68737845\|68742569	hsa-miR-19b	0	0	1
chr10:68737845\|68742569	hsa-miR-4752	0	1	0
chr10:68737845\|68742569	hsa-miR-96-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-512-5p	0	1	0
chr10:68737845\|68742569	hsa-miR-3157-5p	0	1	0
chr10:68737845\|68742569	hsa-miR-216a-5p	0	1	0
chr10:68737845\|68742569	hsa-miR-6858-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-3922-5p	1	0	0
chr10:68737845\|68742569	hsa-miR-3120-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-6890-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-196b-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-6756-5p	1	0	0
chr10:68737845\|68742569	hsa-miR-6766-5p	1	0	0
chr10:68737845\|68742569	hsa-miR-3130-5p	1	1	0
chr10:68737845\|68742569	hsa-miR-6764-5p	1	0	0
chr10:68737845\|68742569	hsa-miR-5699-3p	0	1	0
chr10:68737845\|68742569	hsa-miR-190b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:68737845\|68742569
ORF Type	ORF1
Protein Length	79
Nucleotide Length	237
Protein Sequence	VQQQLQQPQQTLLTQPAVALPTSLSLSTPQPTAQITVSYPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQL
Nucleotide Sequence	GTGCAACAACAGTTACAGCAACCCCAGCAAACCCTCTTAACACAGCCAGCTGTTGCACTGCCTACAAGCCTTAGCCTGTCTACTCCTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCAAGGTCCAGTCAACAGCAAACCCAGCCTCAGAAGCAGCGTGTTTTCACAGGGGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTT

CircID	chr10:68737845\|68742569
ORF Type	ORF1
Protein Length	31
Nucleotide Length	96
Protein Sequence	MCCWLRSRQAKACRQCNSWLLLHTIQGLLRL
Nucleotide Sequence	TTGTGCTGTTGGCTGAGGAGTAGACAGGCTAAGGCTTGTAGGCAGTGCAACAGCTGGCTGTTGTTGCACACTATACAGGGCCTGCTGAGGTTGTGA

CircID	chr10:68737845\|68742569
ORF Type	ORF2
Protein Length	71
Nucleotide Length	213
Protein Sequence	MYSVQQQPAVALPTSLSLSTPQPTAQITVSYPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQL
Nucleotide Sequence	CTGTATAGTGTGCAACAACAGCCAGCTGTTGCACTGCCTACAAGCCTTAGCCTGTCTACTCCTCAGCCAACAGCACAAATAACTGTATCATATCCAACACCAAGGTCCAGTCAACAGCAAACCCAGCCTCAGAAGCAGCGTGTTTTCACAGGGGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTT

CircID	chr10:68737845\|68742569
ORF Type	ORF3
Protein Length	44
Nucleotide Length	132
Protein Sequence	MYHIQHQGPVNSKPSLRSSVFSQGWLQNYMIRLDLWMKMYSFSL
Nucleotide Sequence	CTGTATCATATCCAACACCAAGGTCCAGTCAACAGCAAACCCAGCCTCAGAAGCAGCGTGTTTTCACAGGGGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:68737845\|68742569	NOP56	1	0	2
chr10:68737845\|68742569	MOV10	4	0	0
chr10:68737845\|68742569	ELAVL1	10	7	2
chr10:68737845\|68742569	ELAVL3	1	0	0
chr10:68737845\|68742569	PUM2	0	0	1
chr10:68737845\|68742569	PRPF8	0	0	2
chr10:68737845\|68742569	UPF1	5	1	0
chr10:68737845\|68742569	TNRC6A	1	0	1
chr10:68737845\|68742569	FMR1	4	0	2
chr10:68737845\|68742569	CPSF1	1	0	0
chr10:68737845\|68742569	FUS	1	0	0
chr10:68737845\|68742569	DGCR8	1	0	0
chr10:68737845\|68742569	SRSF1	3	0	0
chr10:68737845\|68742569	NOP58	5	2	4
chr10:68737845\|68742569	SRSF3	1	1	0
chr10:68737845\|68742569	U2AF1	3	0	0
chr10:68737845\|68742569	U2AF2	15	3	1
chr10:68737845\|68742569	DDX54	6	0	6
chr10:68737845\|68742569	EIF3G	1	0	0
chr10:68737845\|68742569	RBM10	3	0	0
chr10:68737845\|68742569	HNRNPL	1	0	2
chr10:68737845\|68742569	FIP1L1	0	1	0
chr10:68737845\|68742569	PTBP1	5	2	0
chr10:68737845\|68742569	HNRNPC	14	6	0
chr10:68737845\|68742569	DHX9	0	0	1
chr10:68737845\|68742569	DDX3X	1	0	0
chr10:68737845\|68742569	ZC3H7B	1	0	0
chr10:68737845\|68742569	STAU1	0	3	0
chr10:68737845\|68742569	ACIN1	8	0	3
chr10:68737845\|68742569	LIN28B	1	0	1
chr10:68737845\|68742569	FXR2	2	0	0
chr10:68737845\|68742569	SND1	0	0	1
chr10:68737845\|68742569	IGF2BP1	8	0	10
chr10:68737845\|68742569	BUD13	3	0	0
chr10:68737845\|68742569	IGF2BP3	9	0	8
chr10:68737845\|68742569	IGF2BP2	12	0	8
chr10:68737845\|68742569	RC3H1	1	0	0
chr10:68737845\|68742569	GTF2F1	1	0	0
chr10:68737845\|68742569	RBFOX2	9	0	0
chr10:68737845\|68742569	RBM47	1	0	1
chr10:68737845\|68742569	SLTM	1	0	0
chr10:68737845\|68742569	RTCB	1	0	0
chr10:68737845\|68742569	CSTF2T	2	2	1
chr10:68737845\|68742569	BCCIP	0	1	0
chr10:68737845\|68742569	CSTF2	1	1	0
chr10:68737845\|68742569	RBM22	0	1	0
chr10:68737845\|68742569	WDR33	1	0	0
chr10:68737845\|68742569	AGO2	9	0	0
chr10:68737845\|68742569	ATXN2	0	1	0
chr10:68737845\|68742569	EIF4A3	2	1	2
chr10:68737845\|68742569	FBL	7	1	1

CircRNA Information