CircRNA Information

General Information
circRNA Basic Information
CircID chr10:70140023|70140122
Strand +
CircType exon
Host Gene ENSG00000156521.12;
Algorism CIRI2;
Sequence CCGGGACAATAATACGGGGGCCACCTACCCCCACCTGAACTTCAGCATTCCCATCACGGTGCTCCAGCCGGCCCTGCAGCAGTACAGCCAGACCCAAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:70140023|70140122 hsa-miR-149-5p 0 0 1
chr10:70140023|70140122 hsa-miR-149-3p 0 0 1
chr10:70140023|70140122 hsa-miR-635 0 0 1
chr10:70140023|70140122 hsa-miR-663b 0 0 1
chr10:70140023|70140122 hsa-miR-1205 0 1 1
chr10:70140023|70140122 hsa-miR-125a-3p 0 0 1
chr10:70140023|70140122 hsa-miR-193a-5p 1 0 1
chr10:70140023|70140122 hsa-miR-663a 1 0 0
chr10:70140023|70140122 hsa-miR-760 1 0 0
chr10:70140023|70140122 hsa-miR-2861 1 0 0
chr10:70140023|70140122 hsa-miR-3196 1 0 0
chr10:70140023|70140122 hsa-miR-3652 0 1 0
chr10:70140023|70140122 hsa-miR-3918 1 1 0
chr10:70140023|70140122 hsa-miR-3135b 1 1 0
chr10:70140023|70140122 hsa-miR-4466 1 0 0
chr10:70140023|70140122 hsa-miR-4479 1 0 0
chr10:70140023|70140122 hsa-miR-4498 1 0 0
chr10:70140023|70140122 hsa-miR-4507 1 0 0
chr10:70140023|70140122 hsa-miR-1587 1 0 0
chr10:70140023|70140122 hsa-miR-4539 1 0 0
chr10:70140023|70140122 hsa-miR-4741 1 0 0
chr10:70140023|70140122 hsa-miR-5787 1 0 0
chr10:70140023|70140122 hsa-miR-6132 1 1 0
chr10:70140023|70140122 hsa-miR-7974 1 0 0
chr10:70140023|70140122 hsa-miR-92a-2-5p 0 1 0
chr10:70140023|70140122 hsa-miR-128-1-5p 1 0 0
chr10:70140023|70140122 hsa-miR-7155-5p 1 0 0
chr10:70140023|70140122 hsa-miR-4687-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6089 1 0 0
chr10:70140023|70140122 hsa-miR-3064-5p 0 1 0
chr10:70140023|70140122 hsa-miR-6716-5p 1 0 0
chr10:70140023|70140122 hsa-miR-3151-5p 1 0 0
chr10:70140023|70140122 hsa-miR-185-3p 1 0 0
chr10:70140023|70140122 hsa-miR-4793-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6835-5p 1 1 0
chr10:70140023|70140122 hsa-miR-3944-3p 1 0 0
chr10:70140023|70140122 hsa-miR-4743-5p 1 0 0
chr10:70140023|70140122 hsa-miR-4446-3p 1 0 0
chr10:70140023|70140122 hsa-miR-3189-3p 1 0 0
chr10:70140023|70140122 hsa-miR-744-5p 1 0 0
chr10:70140023|70140122 hsa-miR-4746-3p 1 0 0
chr10:70140023|70140122 hsa-miR-4763-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6787-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6816-5p 1 0 0
chr10:70140023|70140122 hsa-miR-5001-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6737-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6756-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6769a-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6803-5p 1 1 0
chr10:70140023|70140122 hsa-miR-6722-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6751-5p 1 1 0
chr10:70140023|70140122 hsa-miR-6797-5p 1 0 0
chr10:70140023|70140122 hsa-miR-3620-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6836-5p 1 1 0
chr10:70140023|70140122 hsa-miR-10396a-5p 1 0 0
chr10:70140023|70140122 hsa-miR-10396b-5p 1 0 0
chr10:70140023|70140122 hsa-miR-1909-3p 1 0 0
chr10:70140023|70140122 hsa-miR-4749-5p 1 0 0
chr10:70140023|70140122 hsa-miR-3198 1 0 0
chr10:70140023|70140122 hsa-miR-3940-5p 1 0 0
chr10:70140023|70140122 hsa-miR-5008-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6855-5p 1 0 0
chr10:70140023|70140122 hsa-miR-6753-3p 1 0 0
chr10:70140023|70140122 hsa-miR-6837-5p 1 0 0
chr10:70140023|70140122 hsa-miR-10394-5p 1 1 0
chr10:70140023|70140122 hsa-miR-6504-5p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:70140023|70140122
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MGLAVLLQGRLEHRDGNAEVQVGVGGPRIIVP
Nucleotide Sequence TTGGGTCTGGCTGTACTGCTGCAGGGCCGGCTGGAGCACCGTGATGGGAATGCTGAAGTTCAGGTGGGGGTAGGTGGCCCCCGTATTATTGTCCCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab