CircRNA Information

General Information
circRNA Basic Information
CircID chr10:70422171|70422386
Strand -
CircType exon
Host Gene ENSG00000148730.6;
Algorism CIRI2;
Sequence CATTCATATTCCTTACCCTCTGTCTCTCCTCCCTGTATCCCACCTATGGTTCAGTGTTGCAAGAGTCTGGGCTTGGGGTCTTTAAAACCAGCAGGGGGAAATGATAAAAAGAGAGCTGCTTTCCCTTTTACCTTGAGGTATTCGTCCCTCGGGACAGAGCACAGCTTGTGCAACTCTGGTAGCGTTACCCTGTGACACTGTTTTGAGGTCCACTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:70422171|70422386 hsa-miR-141-5p 0 0 1
chr10:70422171|70422386 hsa-miR-141-3p 0 0 1
chr10:70422171|70422386 hsa-miR-185-5p 0 0 1
chr10:70422171|70422386 hsa-miR-185-3p 0 0 1
chr10:70422171|70422386 hsa-miR-200a-5p 0 0 1
chr10:70422171|70422386 hsa-miR-200a-3p 0 0 1
chr10:70422171|70422386 hsa-miR-370-5p 0 0 1
chr10:70422171|70422386 hsa-miR-370-3p 0 0 1
chr10:70422171|70422386 hsa-miR-492 0 0 1
chr10:70422171|70422386 hsa-miR-555 0 0 1
chr10:70422171|70422386 hsa-miR-597-5p 0 0 1
chr10:70422171|70422386 hsa-miR-597-3p 0 0 1
chr10:70422171|70422386 hsa-miR-646 0 0 1
chr10:70422171|70422386 hsa-miR-1323 0 0 1
chr10:70422171|70422386 hsa-miR-765 1 0 1
chr10:70422171|70422386 hsa-miR-548o-3p 0 0 1
chr10:70422171|70422386 hsa-miR-1321 0 0 1
chr10:70422171|70422386 hsa-miR-548o 0 0 1
chr10:70422171|70422386 hsa-miR-875-5p 0 0 1
chr10:70422171|70422386 hsa-miR-513a-5p 0 0 1
chr10:70422171|70422386 hsa-miR-220c 0 0 1
chr10:70422171|70422386 hsa-miR-138 0 0 1
chr10:70422171|70422386 hsa-miR-3132 1 0 0
chr10:70422171|70422386 hsa-miR-4298 1 0 0
chr10:70422171|70422386 hsa-miR-4270 1 0 0
chr10:70422171|70422386 hsa-miR-3714 1 0 0
chr10:70422171|70422386 hsa-miR-4462 1 0 0
chr10:70422171|70422386 hsa-miR-4499 1 0 0
chr10:70422171|70422386 hsa-miR-4689 1 0 0
chr10:70422171|70422386 hsa-miR-4739 1 0 0
chr10:70422171|70422386 hsa-miR-6133 1 0 0
chr10:70422171|70422386 hsa-miR-8085 1 0 0
chr10:70422171|70422386 hsa-miR-150-3p 1 0 0
chr10:70422171|70422386 hsa-miR-6734-5p 1 0 0
chr10:70422171|70422386 hsa-miR-7106-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6894-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6728-5p 1 0 0
chr10:70422171|70422386 hsa-miR-1236-5p 1 0 0
chr10:70422171|70422386 hsa-miR-7847-3p 1 0 0
chr10:70422171|70422386 hsa-miR-7845-5p 1 0 0
chr10:70422171|70422386 hsa-miR-3126-5p 1 0 0
chr10:70422171|70422386 hsa-miR-2467-3p 1 0 0
chr10:70422171|70422386 hsa-miR-6782-5p 1 0 0
chr10:70422171|70422386 hsa-miR-1229-5p 1 0 0
chr10:70422171|70422386 hsa-miR-885-3p 1 0 0
chr10:70422171|70422386 hsa-miR-6847-5p 1 0 0
chr10:70422171|70422386 hsa-miR-149-3p 1 0 0
chr10:70422171|70422386 hsa-miR-3162-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6801-5p 1 0 0
chr10:70422171|70422386 hsa-miR-1207-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6769b-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6870-5p 1 0 0
chr10:70422171|70422386 hsa-miR-1343-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6754-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6756-5p 1 0 0
chr10:70422171|70422386 hsa-miR-1249-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6797-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6808-5p 1 0 0
chr10:70422171|70422386 hsa-miR-7111-5p 1 0 0
chr10:70422171|70422386 hsa-miR-4728-5p 1 0 0
chr10:70422171|70422386 hsa-miR-5196-5p 1 0 0
chr10:70422171|70422386 hsa-miR-4726-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6777-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6795-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6883-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6887-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6511a-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6731-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6758-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6891-5p 1 0 0
chr10:70422171|70422386 hsa-miR-3150b-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6884-5p 1 0 0
chr10:70422171|70422386 hsa-miR-6835-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr10:70422171|70422386
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MVQCCKSLGLGSLKPAGGNDKKRAAFPFTLRYSSLGTEHSLCNSGSVTL
Nucleotide Sequence ATGGTTCAGTGTTGCAAGAGTCTGGGCTTGGGGTCTTTAAAACCAGCAGGGGGAAATGATAAAAAGAGAGCTGCTTTCCCTTTTACCTTGAGGTATTCGTCCCTCGGGACAGAGCACAGCTTGTGCAACTCTGGTAGCGTTACCCTGTGA
CircID chr10:70422171|70422386
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MHKLCSVPRDEYLKVKGKAALFLSFPPAGFKDPKPRLLQH
Nucleotide Sequence TTGCACAAGCTGTGCTCTGTCCCGAGGGACGAATACCTCAAGGTAAAAGGGAAAGCAGCTCTCTTTTTATCATTTCCCCCTGCTGGTTTTAAAGACCCCAAGCCCAGACTCTTGCAACACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab