CircRNA Information

General Information
circRNA Basic Information
CircID chr10:70883645|70883754
Strand +
CircType exon
Host Gene ENSG00000166228.7;
Algorism CIRI2;
Sequence CACTCTCTTCATCCTGGGGGCTCTGTTACACTAATTTGAATAAACTCTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:70883645|70883754 hsa-miR-31-5p 0 0 1
chr10:70883645|70883754 hsa-miR-31-3p 0 0 1
chr10:70883645|70883754 hsa-miR-527 1 0 1
chr10:70883645|70883754 hsa-miR-607 0 0 1
chr10:70883645|70883754 hsa-miR-1234-3p 0 0 1
chr10:70883645|70883754 hsa-miR-1234 0 0 1
chr10:70883645|70883754 hsa-miR-1225-3p 0 0 1
chr10:70883645|70883754 hsa-miR-361-3p 0 1 1
chr10:70883645|70883754 hsa-miR-518a-5p 1 0 1
chr10:70883645|70883754 hsa-miR-194 0 0 1
chr10:70883645|70883754 hsa-miR-1275 1 0 0
chr10:70883645|70883754 hsa-miR-2861 1 0 0
chr10:70883645|70883754 hsa-miR-3128 0 1 0
chr10:70883645|70883754 hsa-miR-3132 1 0 0
chr10:70883645|70883754 hsa-miR-3147 1 0 0
chr10:70883645|70883754 hsa-miR-3154 1 0 0
chr10:70883645|70883754 hsa-miR-3175 1 0 0
chr10:70883645|70883754 hsa-miR-3937 1 0 0
chr10:70883645|70883754 hsa-miR-3943 0 1 0
chr10:70883645|70883754 hsa-miR-4498 1 0 0
chr10:70883645|70883754 hsa-miR-4523 1 0 0
chr10:70883645|70883754 hsa-miR-1587 1 0 0
chr10:70883645|70883754 hsa-miR-3960 1 0 0
chr10:70883645|70883754 hsa-miR-4688 1 0 0
chr10:70883645|70883754 hsa-miR-4706 1 0 0
chr10:70883645|70883754 hsa-miR-4739 1 0 0
chr10:70883645|70883754 hsa-miR-5192 1 1 0
chr10:70883645|70883754 hsa-miR-5698 1 0 0
chr10:70883645|70883754 hsa-miR-6086 1 0 0
chr10:70883645|70883754 hsa-miR-8085 1 0 0
chr10:70883645|70883754 hsa-miR-8089 1 0 0
chr10:70883645|70883754 hsa-miR-92a-1-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6734-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6809-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6765-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3150a-3p 1 0 0
chr10:70883645|70883754 hsa-miR-6825-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6799-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6510-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3192-5p 1 1 0
chr10:70883645|70883754 hsa-miR-6730-5p 1 0 0
chr10:70883645|70883754 hsa-miR-197-5p 1 0 0
chr10:70883645|70883754 hsa-miR-659-3p 1 0 0
chr10:70883645|70883754 hsa-miR-6798-5p 1 0 0
chr10:70883645|70883754 hsa-miR-7109-5p 1 0 0
chr10:70883645|70883754 hsa-miR-204-3p 1 1 0
chr10:70883645|70883754 hsa-miR-4690-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3202 1 0 0
chr10:70883645|70883754 hsa-miR-149-3p 1 0 0
chr10:70883645|70883754 hsa-miR-6824-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3162-5p 1 0 0
chr10:70883645|70883754 hsa-miR-194-5p 0 1 0
chr10:70883645|70883754 hsa-miR-3158-5p 1 0 0
chr10:70883645|70883754 hsa-miR-4684-3p 1 1 0
chr10:70883645|70883754 hsa-miR-6816-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6865-5p 1 0 0
chr10:70883645|70883754 hsa-miR-1343-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6743-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6752-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6851-5p 1 0 0
chr10:70883645|70883754 hsa-miR-7107-5p 1 1 0
chr10:70883645|70883754 hsa-miR-7110-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6763-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6780a-5p 1 0 0
chr10:70883645|70883754 hsa-miR-7111-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3620-5p 1 0 0
chr10:70883645|70883754 hsa-miR-5196-5p 1 0 0
chr10:70883645|70883754 hsa-miR-10526-3p 1 0 0
chr10:70883645|70883754 hsa-miR-4726-5p 1 0 0
chr10:70883645|70883754 hsa-miR-4745-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6735-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6777-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6794-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6795-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6883-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6887-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6889-5p 1 0 0
chr10:70883645|70883754 hsa-miR-4723-5p 1 0 0
chr10:70883645|70883754 hsa-miR-939-5p 1 0 0
chr10:70883645|70883754 hsa-miR-3199 1 0 0
chr10:70883645|70883754 hsa-miR-30c-1-3p 1 0 0
chr10:70883645|70883754 hsa-miR-6731-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6758-5p 1 0 0
chr10:70883645|70883754 hsa-miR-4646-5p 1 0 0
chr10:70883645|70883754 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:70883645|70883754
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MARKSLLLLGSCKERGEFIQISVTEPPG
Nucleotide Sequence CTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATTCAAATTAGTGTAACAGAGCCCCCAGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab