CircNet

General Information

circRNA Basic Information

CircID	chr10:71730469\|71732375
Strand	+
CircType	exon
Host Gene	ENSG00000107736.19;
Algorism	CIRI2;find_circ;DCC;
Sequence	GTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAGATTGACGAGAGCACAGGGCTTATCATCACCGTGAATTACCTGGACTACGAGACCAAGACCAGCTACATGATGAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGTCTACATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTACTGAGATTGTGCGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAGGCCAAAGCCCTCTTCAAGATAGACGCCATCACG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr10:71730469\|71732375	hsa-miR-138-5p	0	1	1
chr10:71730469\|71732375	hsa-miR-216a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr10:71730469\|71732375
ORF Type	ORF1
Protein Length	175
Nucleotide Length	525
Protein Sequence	VIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSGDGGLVNYRILSGAEGKFEIDESTGLIITVNYLDYETKTSYMMNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFNAYTSTQAKALFKIDAIT
Nucleotide Sequence	GTGATTGTGTACGTGGAGGACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAGATTGACGAGAGCACAGGGCTTATCATCACCGTGAATTACCTGGACTACGAGACCAAGACCAGCTACATGATGAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGTCTACATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTACTGAGATTGTGCGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAGGCCAAAGCCCTCTTCAAGATAGACGCCATCACG

CircID	chr10:71730469\|71732375
ORF Type	ORF2
Protein Length	83
Nucleotide Length	249
Protein Sequence	MCRPLTRPRPSTRASAASTSLCSTSWTRPCSSPMPHTRLPSWRIWHWVLRLCGSRPTPSTTSTKSRTASTPTPAPRPKPSSR*
Nucleotide Sequence	ATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGTCTACATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCTGCCATCCTGGAGAATCTGGCACTGGGTACTGAGATTGTGCGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAGGCCAAAGCCCTCTTCAAGATAG

CircID	chr10:71730469\|71732375
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	MRPPCSHSSSTAVWGFERPQALERQSSWSKPQTETLGMVAW*
Nucleotide Sequence	ATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAGACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGGGATGGTGGCCTGGTGA

CircID	chr10:71730469\|71732375
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MTDVPMPAVSRSPRRLYCCCVNTGASSLMSSTYTI
Nucleotide Sequence	ATGACTGACGTTCCAATGCCTGCGGTCTCTCGAAGCCCCAGACGGCTGTACTGCTGCTGTGTGAACACGGGGGCCTCATCGTTGATGTCCTCCACGTACACAATC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr10:71730469\|71732375	ELAVL1	6	13	3
chr10:71730469\|71732375	TBRG4	2	0	0
chr10:71730469\|71732375	TAF15	1	0	0
chr10:71730469\|71732375	CPSF7	1	2	0
chr10:71730469\|71732375	CPSF6	0	2	0
chr10:71730469\|71732375	NUDT21	0	1	0
chr10:71730469\|71732375	CPSF3	1	0	0
chr10:71730469\|71732375	FUS	1	1	0
chr10:71730469\|71732375	ADAR	1	2	0
chr10:71730469\|71732375	U2AF2	1	11	0
chr10:71730469\|71732375	HNRNPL	0	1	0
chr10:71730469\|71732375	FIP1L1	0	1	0
chr10:71730469\|71732375	HNRNPC	24	25	2
chr10:71730469\|71732375	HNRNPD	3	2	0
chr10:71730469\|71732375	ZC3H7B	1	1	0
chr10:71730469\|71732375	SF3B1	1	0	0
chr10:71730469\|71732375	HNRNPA1	9	6	0
chr10:71730469\|71732375	LIN28B	1	1	0
chr10:71730469\|71732375	TARDBP	3	3	0
chr10:71730469\|71732375	CSTF2T	0	3	0
chr10:71730469\|71732375	CSTF2	3	3	0
chr10:71730469\|71732375	TARBP2	1	0	0
chr10:71730469\|71732375	WDR33	0	2	0
chr10:71730469\|71732375	EWSR1	1	1	0

CircRNA Information