CircRNA Information

General Information
circRNA Basic Information
CircID chr10:72061880|72061991
Strand +
CircType exon
Host Gene ENSG00000107742.11;
Algorism CIRI2;
Sequence AGGGTGCCTCGCCAAGCTGTCTGAGGTCTGTCCCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGAGGAGAGGGGGTCGGCTCAGCAGGAGGAGGCTGTGGCTGCAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr10:72061880|72061991 hsa-miR-10a-5p 0 0 1
chr10:72061880|72061991 hsa-miR-10a-3p 0 0 1
chr10:72061880|72061991 hsa-miR-10b-5p 0 0 1
chr10:72061880|72061991 hsa-miR-10b-3p 0 0 1
chr10:72061880|72061991 hsa-miR-370-5p 0 0 1
chr10:72061880|72061991 hsa-miR-370-3p 0 0 1
chr10:72061880|72061991 hsa-miR-1205 0 0 1
chr10:72061880|72061991 hsa-miR-1324 0 1 1
chr10:72061880|72061991 hsa-miR-767-5p 0 0 1
chr10:72061880|72061991 hsa-miR-1184 0 0 1
chr10:72061880|72061991 hsa-miR-1302 0 1 1
chr10:72061880|72061991 hsa-miR-220b 0 0 1
chr10:72061880|72061991 hsa-miR-1274b 0 0 1
chr10:72061880|72061991 hsa-miR-551a 1 0 0
chr10:72061880|72061991 hsa-miR-596 1 0 0
chr10:72061880|72061991 hsa-miR-631 0 1 0
chr10:72061880|72061991 hsa-miR-661 1 0 0
chr10:72061880|72061991 hsa-miR-1281 1 0 0
chr10:72061880|72061991 hsa-miR-1913 1 0 0
chr10:72061880|72061991 hsa-miR-3183 1 0 0
chr10:72061880|72061991 hsa-miR-4313 1 0 0
chr10:72061880|72061991 hsa-miR-4290 1 0 0
chr10:72061880|72061991 hsa-miR-3661 1 1 0
chr10:72061880|72061991 hsa-miR-4469 1 0 0
chr10:72061880|72061991 hsa-miR-4505 1 0 0
chr10:72061880|72061991 hsa-miR-5193 1 1 0
chr10:72061880|72061991 hsa-miR-8077 1 0 0
chr10:72061880|72061991 hsa-miR-26b-3p 0 1 0
chr10:72061880|72061991 hsa-miR-6749-3p 1 0 0
chr10:72061880|72061991 hsa-miR-93-3p 1 1 0
chr10:72061880|72061991 hsa-miR-3194-3p 0 1 0
chr10:72061880|72061991 hsa-miR-6892-3p 1 1 0
chr10:72061880|72061991 hsa-miR-7851-3p 0 1 0
chr10:72061880|72061991 hsa-miR-1225-3p 1 0 0
chr10:72061880|72061991 hsa-miR-296-5p 1 0 0
chr10:72061880|72061991 hsa-miR-3189-5p 1 0 0
chr10:72061880|72061991 hsa-miR-7110-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6787-3p 1 0 0
chr10:72061880|72061991 hsa-miR-1915-5p 1 0 0
chr10:72061880|72061991 hsa-miR-6845-3p 1 1 0
chr10:72061880|72061991 hsa-miR-877-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6882-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6858-3p 1 0 0
chr10:72061880|72061991 hsa-miR-939-3p 0 1 0
chr10:72061880|72061991 hsa-miR-4793-5p 1 0 0
chr10:72061880|72061991 hsa-miR-4763-5p 1 0 0
chr10:72061880|72061991 hsa-miR-1908-3p 1 0 0
chr10:72061880|72061991 hsa-miR-4640-5p 1 0 0
chr10:72061880|72061991 hsa-miR-6803-3p 1 0 0
chr10:72061880|72061991 hsa-miR-4691-3p 0 1 0
chr10:72061880|72061991 hsa-miR-7113-3p 1 0 0
chr10:72061880|72061991 hsa-miR-7111-3p 1 0 0
chr10:72061880|72061991 hsa-miR-1266-3p 0 1 0
chr10:72061880|72061991 hsa-miR-4640-3p 1 1 0
chr10:72061880|72061991 hsa-miR-7156-3p 0 1 0
chr10:72061880|72061991 hsa-miR-6769a-3p 1 0 0
chr10:72061880|72061991 hsa-miR-339-5p 1 0 0
chr10:72061880|72061991 hsa-miR-6825-3p 1 0 0
chr10:72061880|72061991 hsa-miR-1237-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6867-3p 1 0 0
chr10:72061880|72061991 hsa-miR-1224-3p 1 0 0
chr10:72061880|72061991 hsa-miR-2276-5p 1 0 0
chr10:72061880|72061991 hsa-miR-3074-5p 1 1 0
chr10:72061880|72061991 hsa-miR-6865-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6826-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6886-3p 1 0 0
chr10:72061880|72061991 hsa-miR-5088-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6795-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6859-3p 1 1 0
chr10:72061880|72061991 hsa-miR-4649-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6777-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6880-3p 1 0 0
chr10:72061880|72061991 hsa-miR-449b-3p 0 1 0
chr10:72061880|72061991 hsa-miR-3620-3p 1 1 0
chr10:72061880|72061991 hsa-miR-4750-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6779-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6734-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6846-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6812-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6800-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6510-3p 1 0 0
chr10:72061880|72061991 hsa-miR-5002-3p 1 0 0
chr10:72061880|72061991 hsa-miR-3127-3p 1 0 0
chr10:72061880|72061991 hsa-miR-320a-5p 1 1 0
chr10:72061880|72061991 hsa-miR-6754-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6877-3p 1 0 0
chr10:72061880|72061991 hsa-miR-2682-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6893-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6511a-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6756-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6792-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6862-3p 1 1 0
chr10:72061880|72061991 hsa-miR-10401-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6810-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6829-3p 1 1 0
chr10:72061880|72061991 hsa-miR-10392-3p 1 0 0
chr10:72061880|72061991 hsa-miR-4723-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6511b-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6751-3p 1 1 0
chr10:72061880|72061991 hsa-miR-6769b-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6819-3p 1 0 0
chr10:72061880|72061991 hsa-miR-6823-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr10:72061880|72061991
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MSQVAQVVQVEQGEERGSAQQEEAVAAE
Nucleotide Sequence CTGTCCCAGGTGGCCCAGGTGGTGCAGGTAGAACAGGGTGAGGAGAGGGGGTCGGCTCAGCAGGAGGAGGCTGTGGCTGCAGAG
CircID chr10:72061880|72061991
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MQPQPPPAEPTPSPHPVLPAPPGPPGTDLRQLGEAP
Nucleotide Sequence CTGCAGCCACAGCCTCCTCCTGCTGAGCCGACCCCCTCTCCTCACCCTGTTCTACCTGCACCACCTGGGCCACCTGGGACAGACCTCAGACAGCTTGGCGAGGCACCC
CircID chr10:72061880|72061991
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MLSRPPLLTLFYLHHLGHLGQTSDSLARHP
Nucleotide Sequence CTGCTGAGCCGACCCCCTCTCCTCACCCTGTTCTACCTGCACCACCTGGGCCACCTGGGACAGACCTCAGACAGCTTGGCGAGGCACCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab